Python get_data_path Examples

Example #1

File: test_summary.py Project: fuying98/Kleborate

 def setUp(self):
     self.data_dir = get_data_path()
     Args = collections.namedtuple('Args',
                                   ['resistance', 'kaptive_k', 'kaptive_o'])
     self.args = Args(resistance=True, kaptive_k=False, kaptive_o=False)
     _, _, self.res_headers = get_output_headers(self.args, self.data_dir)
     self.results = {res_class: '-' for res_class in self.res_headers}
     self.results['Yersiniabactin'] = '-'
     self.results['Colibactin'] = '-'
     self.results['Aerobactin'] = '-'

Example #2

File: test_mlst.py Project: fuying98/Kleborate

 def setUp(self):
     self.data_dir = get_data_path()

Example #3

 def setUp(self):
     self.args = Args()
     self.data_dir = get_data_path()
     _, _, self.res_headers = get_output_headers(self.args, self.data_dir)

Example #4

 def setUp(self):
     self.data_dir = get_data_path()
     Args = collections.namedtuple('Args',
                                   ['resistance', 'kaptive_k', 'kaptive_o'])
     self.args = Args(resistance=True, kaptive_k=False, kaptive_o=False)
     _, _, self.res_headers = get_output_headers(self.args, self.data_dir)