def one_explo(param, param_to_explore):
PARAMFILE = "params.xml"
MEASUREFILE = "measures.xml"
result_path = "/media/thor/data/ktsimu/small_explo_ld_slope_ld0"
result_path = "/home/hadim/local/data/ktsimu/explo_ld_slope_ld0"
number_simu = 500
name = "explo_%s_%s" % (param['name'], str(param['value']))
ncore = 4
paramtree = ParamTree(PARAMFILE)
paramtree.change_dic(param['name'], param['value'])
explorator = Explorator(result_path,
number_simu,
name=name,
ncore=ncore,
paramtree=paramtree,
measurefile=MEASUREFILE,
parameter_to_explore=parameter_to_explore,
pool_eval=True,
name_without_date=True
)
explorator.run()
p = ProcessExploration(results_path=explorator.results_path)
p.evaluate(run_all=True, debug=True)
del explorator
del p
gc.collect()
def main():
# Try to import local config.py variables
params_file = config.params_file
measures_file = config.measures_file
results_file = config.results_file
nsimu = config.nsimu
results_path = config.results_path
explo_simu_name = config.explo_simu_name
evaluations = config.evaluations
# Arguments parser
parser = argparse.ArgumentParser(description='KtSimu Explorator')
parser.add_argument('--nsimu', "-n", type=int, default=nsimu,
help='Number of simulations to launch (default = 10)')
parser.add_argument("--results", "-r", type=str, default=results_path,
help='Directory to store results')
parser.add_argument("--name", "-a", type=str, default="",
help='Name of the simulations')
parser.add_argument("--eval", '-e', default=True,
action="store_true", help='Launch pool evaluations after simulations has runned')
parser.add_argument("--only-eval", '-o', dest="only_eval", type=str, default="",
help='Launch only pool evaluations and specified ktsimu results path')
parser.add_argument('--params', '-p', type=str, default=params_file,
help="For new simulation, specified params.xml file")
parser.add_argument('--measures', '-m', type=str, default=measures_file,
help="For new simulation, specified measures.xml file")
args = parser.parse_args()
PARAMFILE = params_file
MEASUREFILE = measures_file
result_path = args.results
number_simu = args.nsimu
name = args.name
pool_eval = args.eval
only_eval = args.only_eval
ncore = 4
# Here we explore ld_slope parameter
parameter_to_explore = {'name': 'ldep', 'vector': np.arange(0, 1, 0.1)}
if name == "":
name = "%s_n%i_p%i_%s" % (config.explo_simu_name, number_simu,
len(parameter_to_explore['vector']),
parameter_to_explore['name'])
if only_eval:
p = ProcessExploration(results_path=only_eval)
resu = p.evaluate(run_all=True, debug=True)
else:
explorator = Explorator(result_path,
number_simu,
name=name,
ncore=ncore,
paramfile=PARAMFILE,
measurefile=MEASUREFILE,
parameter_to_explore=parameter_to_explore,
pool_eval=pool_eval,
name_without_date=True
)
explorator.run()
if pool_eval:
p = ProcessExploration(results_path=explorator.results_path)
resu = p.evaluate(run_all=True, debug=True)