def __init__(self, gene, threshold):
Event.__init__(self, gene)
self.etype = 'RI'
self.construct_events(gene)
if len(self.positive_ids) > 1 and threshold:
self.merge_events(threshold=threshold, overlap_fun=self.overlap)
def __init__(self, gene, threshold):
Event.__init__(self, gene)
if self.gene.strand == '-':
self.etype = 'AF'
else:
self.etype = 'AL'
self.positive_coords = {}
self.negative_coords = {}
self.construct_events(gene)
if len(self.positive_ids) > 1 and threshold:
self.merge_events(threshold=threshold, overlap_fun=self.overlap)