Python save_wormviz_image Examples

Programming Language: Python

Namespace/Package Name: libcelegans

Method/Function: save_wormviz_image

Examples at hotexamples.com: 2

Python save_wormviz_image - 2 examples found. These are the top rated real world Python examples of libcelegans.save_wormviz_image extracted from open source projects. You can rate examples to help us improve the quality of examples.

Example #1

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def mviz(VIZDIR,NamePrefix,OrigImage,Head,Tail,MidLine,Sides):

    libcelegans.save_wormviz_image(VIZDIR,NamePrefix+"-mviz.jpg" ,OrigImage,
    scipy.ndimage.morphology.binary_dilation(libcelegans.pointlist_to_array2(
     Sides,numpy.zeros(numpy.shape(OrigImage))),iterations=2),
    scipy.ndimage.morphology.binary_dilation(libcelegans.pointlist_to_array2(
     MidLine,numpy.zeros(numpy.shape(OrigImage))),iterations=3),
    scipy.ndimage.morphology.binary_dilation(libcelegans.pointlist_to_array2(
     [Head],numpy.zeros(numpy.shape(OrigImage))),iterations=7),
    scipy.ndimage.morphology.binary_dilation(libcelegans.pointlist_to_array2(
     [Tail],numpy.zeros(numpy.shape(OrigImage))),iterations=7),
     )

Example #2

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def viz(VIZDIR,NamePrefix,DiffImage,OrigImage,SideOnePath,SideTwoPath,Tail,Head,MidLine): 

    scipy.misc.imsave(os.path.join(VIZDIR,NamePrefix) + "nobg.jpg",DiffImage) 

    libcelegans.save_wormviz_image(VIZDIR,NamePrefix+"-viz.jpg" ,OrigImage,
    scipy.ndimage.morphology.binary_dilation(libcelegans.pointlist_to_array2(
     SideOnePath,numpy.zeros(numpy.shape(OrigImage))),iterations=1),
    scipy.ndimage.morphology.binary_dilation(libcelegans.pointlist_to_array2(
     SideTwoPath,numpy.zeros(numpy.shape(OrigImage))),iterations=1),
    scipy.ndimage.morphology.binary_dilation(Tail,iterations=5),
    scipy.ndimage.morphology.binary_dilation(Head,iterations=5),
    scipy.ndimage.morphology.binary_dilation(libcelegans.pointlist_to_array2(
     MidLine,numpy.zeros(numpy.shape(OrigImage))),iterations=1),
     )