def test_id(self):
from libcellml import Variable
from libcellml.variable import Variable_setEquivalenceMappingId, Variable_setEquivalenceConnectionId, \
Variable_equivalenceMappingId, Variable_equivalenceConnectionId
from libcellml.variable import Variable_removeEquivalenceMappingId, Variable_removeEquivalenceConnectionId
v1 = Variable("v1")
v2 = Variable("v2")
Variable.addEquivalence(v1, v2)
self.assertEqual("", Variable.equivalenceMappingId(v1, v2))
Variable.setEquivalenceMappingId(v1, v2, "mapping_id")
self.assertEqual("mapping_id", Variable.equivalenceMappingId(v1, v2))
Variable.removeEquivalenceMappingId(v1, v2)
self.assertEqual("", Variable.equivalenceMappingId(v1, v2))
Variable_setEquivalenceMappingId(v1, v2, "other_mapping_id")
self.assertEqual("other_mapping_id",
Variable_equivalenceMappingId(v1, v2))
Variable_removeEquivalenceMappingId(v1, v2)
self.assertEqual("", Variable_equivalenceMappingId(v1, v2))
self.assertEqual("", Variable.equivalenceConnectionId(v1, v2))
Variable.setEquivalenceConnectionId(v1, v2, "connection_id")
self.assertEqual("connection_id",
Variable.equivalenceConnectionId(v1, v2))
Variable.removeEquivalenceConnectionId(v1, v2)
self.assertEqual("", Variable.equivalenceConnectionId(v1, v2))
Variable_setEquivalenceConnectionId(v1, v2, "other_connection_id")
self.assertEqual("other_connection_id",
Variable_equivalenceConnectionId(v1, v2))
Variable_removeEquivalenceConnectionId(v1, v2)
self.assertEqual("", Variable_equivalenceConnectionId(v1, v2))
def test_auto_ids(self):
from libcellml import Annotator, Parser, Variable
annotator = Annotator()
parser = Parser()
model_string = file_contents("annotator/unique_ids.cellml")
model = parser.parseModel(model_string)
annotator.setModel(model)
annotator.clearAllIds()
annotator.assignAllIds()
self.assertEqual("b4da55", model.id())
self.assertEqual("b4da56", model.importSource(0).id())
self.assertEqual("b4da57", model.importSource(1).id())
self.assertEqual("b4da58", model.units(0).id())
self.assertEqual("b4da59", model.units(1).id())
self.assertEqual("b4da5a", model.units(2).id())
self.assertEqual("b4da5b", model.units(3).id())
self.assertEqual("b4da5c", model.units(1).unitId(0))
self.assertEqual("b4da5d", model.component(0).id())
self.assertEqual("b4da5e", model.component(1).id())
self.assertEqual("b4da5f", model.component(1).component(0).id())
self.assertEqual("b4da60", model.component(1).variable(0).id())
self.assertEqual("b4da61", model.component(1).variable(1).id())
self.assertEqual("b4da62",
model.component(1).component(0).variable(0).id())
self.assertEqual("b4da63",
model.component(1).component(0).variable(1).id())
self.assertEqual("b4da64", model.component(1).reset(0).id())
self.assertEqual("b4da65", model.component(1).reset(0).resetValueId())
self.assertEqual("b4da66", model.component(1).reset(0).testValueId())
c2v1 = model.component("component2").variable("variable1")
c2v2 = model.component("component2").variable("variable2")
c3v1 = model.component("component3").variable("variable1")
c3v2 = model.component("component3").variable("variable2")
self.assertEqual("b4da67",
Variable.equivalenceConnectionId(c2v1, c3v1))
self.assertEqual("b4da67",
Variable.equivalenceConnectionId(c2v2, c3v2))
self.assertEqual("b4da68", Variable.equivalenceMappingId(c2v1, c3v1))
self.assertEqual("b4da69", Variable.equivalenceMappingId(c2v2, c3v2))
self.assertEqual("b4da6a",
model.component("component2").encapsulationId())
self.assertEqual("b4da6b",
model.component("component3").encapsulationId())
self.assertEqual("b4da6c", model.encapsulationId())
def test_auto_id_individual(self):
from libcellml import Annotator, CellmlElementType, Parser, Variable
from libcellml import Unit, VariablePair
annotator = Annotator()
parser = Parser()
model_string = file_contents("annotator/no_ids.cellml")
model = parser.parseModel(model_string)
annotator.setModel(model)
self.assertEqual(
"b4da55",
annotator.assignId(model.component(0),
CellmlElementType.COMPONENT))
self.assertEqual("b4da55", model.component(0).id())
self.assertEqual(
"b4da56",
annotator.assignId(model.component("component2"),
CellmlElementType.COMPONENT_REF))
self.assertEqual("b4da56",
model.component("component2").encapsulationId())
self.assertEqual(
"b4da57",
annotator.assignId(
VariablePair(
model.component("component2").variable("variable1"),
model.component("component2").variable(
"variable1").equivalentVariable(0)),
CellmlElementType.CONNECTION))
self.assertEqual(
"b4da57",
Variable.equivalenceConnectionId(
model.component("component2").variable("variable1"),
model.component("component2").variable(
"variable1").equivalentVariable(0)))
self.assertEqual("b4da58", annotator.assignId(model.importSource(0)))
self.assertEqual("b4da58", model.importSource(0).id())
self.assertEqual(
"b4da59",
annotator.assignId(
VariablePair(
model.component("component2").variable("variable2"),
model.component("component2").variable(
"variable2").equivalentVariable(0)),
CellmlElementType.MAP_VARIABLES))
self.assertEqual(
"b4da59",
Variable.equivalenceMappingId(
model.component("component2").variable("variable2"),
model.component("component2").variable(
"variable2").equivalentVariable(0)))
self.assertEqual("b4da5a",
annotator.assignId(model, CellmlElementType.MODEL))
self.assertEqual("b4da5a", model.id())
self.assertEqual(
"b4da5b",
annotator.assignId(
model.component("component2").reset(0),
CellmlElementType.RESET))
self.assertEqual("b4da5b", model.component("component2").reset(0).id())
self.assertEqual(
"b4da5c",
annotator.assignId(
model.component("component2").reset(0),
CellmlElementType.RESET_VALUE))
self.assertEqual("b4da5c",
model.component("component2").reset(0).resetValueId())
self.assertEqual(
"b4da5d",
annotator.assignId(
model.component("component2").reset(0),
CellmlElementType.TEST_VALUE))
self.assertEqual("b4da5d",
model.component("component2").reset(0).testValueId())
self.assertEqual("b4da5e", annotator.assignId(Unit(model.units(1), 0)))
self.assertEqual("b4da5e", model.units(1).unitId(0))
self.assertEqual("b4da5f", annotator.assignId(model.units(1)))
self.assertEqual("b4da5f", model.units(1).id())
self.assertEqual("b4da60",
annotator.assignId(model.component(1).variable(0)))
self.assertEqual("b4da60", model.component(1).variable(0).id())
self.assertEqual(
"b4da61", annotator.assignId(model,
CellmlElementType.ENCAPSULATION))
self.assertEqual("b4da61", model.encapsulationId())
def test_assign_by_type(self):
from libcellml import Annotator, Parser, Variable
from libcellml import Unit, VariablePair
annotator = Annotator()
parser = Parser()
model_string = file_contents("annotator/no_ids.cellml")
model = parser.parseModel(model_string)
annotator.setModel(model)
c = model.component(0)
self.assertEqual("", model.id())
annotator.assignModelId(model)
self.assertEqual("b4da55", model.id())
self.assertEqual("", model.encapsulationId())
annotator.assignEncapsulationId(model)
self.assertEqual("b4da56", model.encapsulationId())
self.assertEqual("", c.id())
annotator.assignComponentId(c)
self.assertEqual("b4da57", c.id())
self.assertEqual("", c.encapsulationId())
annotator.assignComponentRefId(c)
self.assertEqual("b4da58", c.encapsulationId())
c2v1 = model.component("component2").variable("variable1")
c3v1 = model.component("component3").variable("variable1")
self.assertEqual("", Variable.equivalenceConnectionId(c2v1, c3v1))
annotator.assignConnectionId(VariablePair(c2v1, c3v1))
self.assertEqual("b4da59",
Variable.equivalenceConnectionId(c2v1, c3v1))
self.assertEqual("", Variable.equivalenceMappingId(c2v1, c3v1))
annotator.assignMapVariablesId(VariablePair(c2v1, c3v1))
self.assertEqual("b4da5a", Variable.equivalenceMappingId(c2v1, c3v1))
c3v2 = model.component("component3").variable("variable2")
self.assertEqual("", c3v2.id())
annotator.assignVariableId(c3v2)
self.assertEqual("b4da5b", c3v2.id())
u = model.units(1)
self.assertEqual("", u.id())
annotator.assignUnitsId(u)
self.assertEqual("b4da5c", u.id())
r = model.component("component2").reset(0)
self.assertEqual("", r.id())
annotator.assignResetId(r)
self.assertEqual("b4da5d", r.id())
self.assertEqual("", r.testValueId())
annotator.assignTestValueId(r)
self.assertEqual("b4da5e", r.testValueId())
self.assertEqual("", r.resetValueId())
annotator.assignResetValueId(r)
self.assertEqual("b4da5f", r.resetValueId())
i = model.importSource(0)
self.assertEqual("", i.id())
annotator.assignImportSourceId(i)
self.assertEqual("b4da60", i.id())
self.assertEqual("", u.unitId(0))
annotator.assignUnitId(Unit(u, 0))
self.assertEqual("b4da61", u.unitId(0))
def test_assign_by_type(self):
from libcellml import Annotator, Parser, Variable, CellmlElementType
from libcellml import UnitsItem, VariablePair
annotator = Annotator()
parser = Parser()
model_string = file_contents("annotator/no_ids.cellml")
model = parser.parseModel(model_string)
annotator.setModel(model)
c = model.component(0)
self.assertEqual("", model.id())
annotator.assignId(model)
self.assertEqual("b4da55", model.id())
self.assertEqual("", model.encapsulationId())
annotator.assignId(model, CellmlElementType.ENCAPSULATION)
self.assertEqual("b4da56", model.encapsulationId())
self.assertEqual("", c.id())
annotator.assignId(c)
self.assertEqual("b4da57", c.id())
self.assertEqual("", c.encapsulationId())
annotator.assignId(c, CellmlElementType.COMPONENT_REF)
self.assertEqual("b4da58", c.encapsulationId())
c2v1 = model.component("component2").variable("variable1")
c3v1 = model.component("component3").variable("variable1")
self.assertEqual("", Variable.equivalenceConnectionId(c2v1, c3v1))
annotator.assignId(VariablePair(c2v1, c3v1), CellmlElementType.CONNECTION)
self.assertEqual("b4da59", Variable.equivalenceConnectionId(c2v1, c3v1))
self.assertEqual("", Variable.equivalenceMappingId(c2v1, c3v1))
annotator.assignId(VariablePair(c2v1, c3v1))
self.assertEqual("b4da5a", Variable.equivalenceMappingId(c2v1, c3v1))
c3v2 = model.component("component3").variable("variable2")
self.assertEqual("", c3v2.id())
annotator.assignId(c3v2)
self.assertEqual("b4da5b", c3v2.id())
u = model.units(1)
self.assertEqual("", u.id())
annotator.assignId(u)
self.assertEqual("b4da5c", u.id())
r = model.component("component2").reset(0)
self.assertEqual("", r.id())
annotator.assignId(r)
self.assertEqual("b4da5d", r.id())
self.assertEqual("", r.testValueId())
annotator.assignId(r, CellmlElementType.TEST_VALUE)
self.assertEqual("b4da5e", r.testValueId())
self.assertEqual("", r.resetValueId())
annotator.assignId(r, CellmlElementType.RESET_VALUE)
self.assertEqual("b4da5f", r.resetValueId())
i = model.component("component1").importSource()
self.assertEqual("", i.id())
annotator.assignId(i)
self.assertEqual("b4da60", i.id())
self.assertEqual("", u.unitId(0))
annotator.assignId(UnitsItem(u, 0))
self.assertEqual("b4da61", u.unitId(0))
