def test_correct_output(self, output_test_fixtures):
params = output_test_fixtures.pop('params')
output = output_test_fixtures.pop('output')
output = output.magnitude * 1000
_to_si_units(params)
_strip_units(params)
assert_allclose(self.func(**params), output)
def test_correct_output(self, output_test_fixtures):
params = output_test_fixtures.pop('params')
outputs = output_test_fixtures.pop('output')
_to_si_units(params)
_strip_units(params)
outputs = outputs.magnitude * 1000
from ...checks import check_correct_output_for_several_mus_and_sigmas
check_correct_output_for_several_mus_and_sigmas(
self.func, params, outputs)
def std_unitless_params(request, all_std_params):
"""
Returns set of standard params needed by requesting tested function.
For using this fixture, the function test class needs to have a class
attribute `func`, which is the tested function as a staticmethod.
"""
params = get_required_params(request.cls.func, all_std_params)
_strip_units(params)
return params
def test_correct_output(self, output_test_fixtures):
params = output_test_fixtures.pop('params')
output = output_test_fixtures.pop('output')
_strip_units(params)
output = output.magnitude / 1000
check_correct_output(self.func, params, output)
def test_V_0_larger_V_th_raise_exception(self, std_params):
_strip_units(std_params)
check_V_0_larger_V_th_raise_exception(self.func, std_params)
# only run code if users are sure they want to do it
if '--force' in args.keys():
fixture_path = 'unit/data/'
module = args['<module>']
config_path = 'unit/config/' + module + '/'
param_files = os.listdir(config_path)
regimes = [file.replace('.yaml', '') for file in param_files]
regime_params = [load_val_unit_dict_from_yaml(config_path + file)
for file in param_files]
for dict in regime_params:
_to_si_units(dict)
_strip_units(dict)
if module == 'firing_rates':
create_and_save_fixtures(lmt.lif.delta._firing_rate,
regime_params, regimes,
fixture_path + 'lif_delta_firing_rate.h5')
create_and_save_fixtures(lmt.lif.exp._firing_rate_taylor,
regime_params, regimes,
fixture_path
+ 'lif_exp_firing_rate_taylor.h5')
create_and_save_fixtures(lmt.lif.exp._firing_rate_shift,
regime_params, regimes,
fixture_path
+ 'lif_exp_firing_rate_shift.h5')
elif module == 'inputs':
create_and_save_fixtures(lmt.lif._static._mean_input,