#
# Developed for the LSST Data Management System.
# This product includes software developed by the LSST Project
# (https://www.lsst.org).
# See the COPYRIGHT file at the top-level directory of this distribution
# for details of code ownership.
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
from lsst.utils.deprecated import deprecate_pybind11
from .convolveImage import convolve
__all__ = [] # import this module only for its side effects
convolve = deprecate_pybind11(
convolve,
reason=
'Overloads that do *not* use a ``ConvolutionControl`` are deprecated. '
'To be removed after 20.0.0.')
Parameters
----------
summaryStats : `lsst.afw.image.ExposureSummaryStats`
"""
self.setComponent(self.KEY_SUMMARY_STATS, summaryStats)
def hasSummaryStats(self):
"""Check if exposureInfo has a summary statistics component.
Returns
-------
hasSummaryStats : `bool`
True if exposureInfo has a summary statistics component.
"""
return self.hasComponent(self.KEY_SUMMARY_STATS)
ExposureInfo.hasFilterLabel = deprecate_pybind11(
ExposureInfo.hasFilterLabel,
reason="Replaced by hasFilter. Will be removed after v24.",
version="v24.0")
ExposureInfo.getFilterLabel = deprecate_pybind11(
ExposureInfo.getFilterLabel,
reason="Replaced by getFilter. Will be removed after v24.",
version="v24.0")
ExposureInfo.setFilterLabel = deprecate_pybind11(
ExposureInfo.setFilterLabel,
reason="Replaced by setFilter. Will be removed after v24.",
version="v24.0")
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
from lsst.utils import continueClass
from lsst.utils.deprecated import deprecate_pybind11
from .background import Background, BackgroundMI
__all__ = [] # import this module only for its side effects
@continueClass # noqa: F811
class Background:
def __reduce__(self):
"""Pickling"""
return self.__class__, (self.getImageBBox(), self.getStatsImage())
BackgroundMI.getPixel = deprecate_pybind11(
BackgroundMI.getPixel,
reason='Use `getImageF` instead. To be removed after 20.0.0.')
padding=padding)
readFitsWithOptions = classmethod(imageReadFitsWithOptions)
writeFitsWithOptions = exposureWriteFitsWithOptions
Exposure.register(np.int32, ExposureI)
Exposure.register(np.float32, ExposureF)
Exposure.register(np.float64, ExposureD)
Exposure.register(np.uint16, ExposureU)
Exposure.register(np.uint64, ExposureL)
Exposure.alias("I", ExposureI)
Exposure.alias("F", ExposureF)
Exposure.alias("D", ExposureD)
Exposure.alias("U", ExposureU)
Exposure.alias("L", ExposureL)
for cls in set(Exposure.values()):
supportSlicing(cls)
disableImageArithmetic(cls)
cls.getFilterLabel = deprecate_pybind11(
cls.getFilterLabel,
reason="Replaced by getFilter. Will be removed after v24.",
version="v24.0")
cls.setFilterLabel = deprecate_pybind11(
cls.setFilterLabel,
reason="Replaced by setFilter. Will be removed after v24.",
version="v24.0")
# Can't attach deprecation warning to filterLabel property.
# This file is part of afw.
#
# Developed for the LSST Data Management System.
# This product includes software developed by the LSST Project
# (https://www.lsst.org).
# See the COPYRIGHT file at the top-level directory of this distribution
# for details of code ownership.
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
__all__ = [] # import this module only for its side effects
from lsst.utils.deprecated import deprecate_pybind11
from .readMetadata import readMetadata
readMetadata = deprecate_pybind11(
readMetadata,
reason="Use `afw.fits.readMetadata` instead. To be removed after 20.0.0.")
# This file is part of afw.
#
# Developed for the LSST Data Management System.
# This product includes software developed by the LSST Project
# (https://www.lsst.org).
# See the COPYRIGHT file at the top-level directory of this distribution
# for details of code ownership.
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
# This file exists only to support deprecation, and can be removed on DM-27811.
from lsst.utils.deprecated import deprecate_pybind11
from ._imageLib import ExposureFitsReader
ExposureFitsReader.readFilterLabel = deprecate_pybind11(
ExposureFitsReader.readFilterLabel,
reason="Replaced by readFilter. Will be removed after v24.",
version="v24.0")
Notes
-----
This pure python implementation exists as a historical artifact
related to SWIG limitations. It might be practical to wrap the
overloaded C++ functions with pybind11, but there didn't seem much
point.
"""
schema = Schema()
outKey1 = schema.addField("first", type=np.int64,
doc="ID for first source record in match.")
outKey2 = schema.addField("second", type=np.int64,
doc="ID for second source record in match.")
keyD = schema.addField("distance", type=np.float64,
doc="Distance between matches sources.")
result = BaseCatalog(schema)
result.table.preallocate(len(matches))
for match in matches:
record = result.addNew()
record.set(outKey1, match.first.getId())
record.set(outKey2, match.second.getId())
record.set(keyD, match.distance)
return result
matchXy = deprecate_pybind11(
matchXy,
reason="Overloads that don't use `MatchControl` are deprecated. To be removed after 20.0.0.")
matchRaDec = deprecate_pybind11(
matchRaDec,
reason="Overloads that don't use `MatchControl` are deprecated. To be removed after 20.0.0.")
def __reduce__(self):
"""Pickling"""
return self.__class__, (self.getImageBBox(), self.getStatsImage())
_getImageF = Background.getImageF
def getImageF(self, *args, **kwargs):
# This method called hundreds of times; warn only for invalid use
if not args and not kwargs:
warnings.warn(
'Call to deprecated method getImageF(). (Zero-argument overload is deprecated; '
'use one that takes an ``interpStyle`` instead. To be removed after 20.0.0.)',
FutureWarning,
stacklevel=2)
return self._getImageF(*args, **kwargs)
BackgroundControl.getInterpStyle = deprecate_pybind11(
BackgroundControl.getInterpStyle,
reason=
'Replaced by passing style to `Background.getImageF`. To be removed after 20.0.0.'
)
BackgroundControl.setInterpStyle = deprecate_pybind11(
BackgroundControl.setInterpStyle,
reason=
'Replaced by passing style to `Background.getImageF`. To be removed after 20.0.0.'
)
BackgroundMI.getPixel = deprecate_pybind11(
BackgroundMI.getPixel,
reason='Use `getImageF` instead. To be removed after 20.0.0.')
return string.format(self.image.array, self.mask.array,
self.mask.getMaskPlaneDict(), self.variance.array,
self.getBBox())
def __repr__(self):
return "{}.{}=({})".format(self.__module__, self.__class__.__name__,
str(self))
readFitsWithOptions = classmethod(imageReadFitsWithOptions)
writeFitsWithOptions = exposureWriteFitsWithOptions
MaskedImage.register(np.int32, MaskedImageI)
MaskedImage.register(np.float32, MaskedImageF)
MaskedImage.register(np.float64, MaskedImageD)
MaskedImage.register(np.uint16, MaskedImageU)
MaskedImage.register(np.uint64, MaskedImageL)
MaskedImage.alias("I", MaskedImageI)
MaskedImage.alias("F", MaskedImageF)
MaskedImage.alias("D", MaskedImageD)
MaskedImage.alias("U", MaskedImageU)
MaskedImage.alias("L", MaskedImageL)
for cls in set(MaskedImage.values()):
supportSlicing(cls)
disableImageArithmetic(cls)
cls.__ilshift__ = deprecate_pybind11(
cls.__ilshift__,
reason="Use `assign` instead. To be removed after 20.0.0.")
children : iterable of `~lsst.afw.table.SourceRecord`
Children sources.
"""
if not self.isSorted(SourceTable.getParentKey()):
raise AssertionError(
"The table is not sorted by parent, so cannot getChildren")
s = self.equal_range(parent, SourceTable.getParentKey())
if args:
return (self[s], ) + tuple(arg[s] for arg in args)
else:
return self[s]
SourceTable.getCentroidDefinition = deprecate_pybind11(
SourceTable.getCentroidDefinition,
reason=
'Use `getSchema().getAliasMap().get("slot_Centroid")` instead. To be removed after 20.0.0.'
)
SourceTable.hasCentroidSlot = deprecate_pybind11(
SourceTable.hasCentroidSlot,
reason=
'Use `getCentroidSlot().isValid()` instead. To be removed after 20.0.0.')
SourceTable.getCentroidKey = deprecate_pybind11(
SourceTable.getCentroidKey,
reason=
'Use `getCentroidSlot().getMeasKey()` instead. To be removed after 20.0.0.'
)
SourceTable.getCentroidErrKey = deprecate_pybind11(
SourceTable.getCentroidErrKey,
reason=
'Use `getCentroidSlot().getErrKey()` instead. To be removed after 20.0.0.')
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
from lsst.utils.deprecated import deprecate_pybind11
from lsst.utils import continueClass
from ._imageLib import ExposureInfo
__all__ = [] # import this module only for its side effects
ExposureInfo.getFilter = deprecate_pybind11(
ExposureInfo.getFilter,
reason="Replaced by getFilterLabel. Will be removed after v22.",
version="v22.0")
ExposureInfo.setFilter = deprecate_pybind11(
ExposureInfo.setFilter,
reason="Replaced by setFilterLabel. Will be removed after v22.",
version="v22.0")
@continueClass
class ExposureInfo: # noqa: F811
KEY_SUMMARY_STATS = 'SUMMARY_STATS'
def getSummaryStats(self):
"""Get exposure summary statistics component.
# (https://www.lsst.org).
# See the COPYRIGHT file at the top-level directory of this distribution
# for details of code ownership.
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
from lsst.utils.deprecated import deprecate_pybind11
from .kernel import Kernel
__all__ = [] # import this module only for its side effects
Kernel.getCtrX = deprecate_pybind11(
Kernel.getCtrX, reason='Use `getCtr` instead. To be removed after 20.0.0.')
Kernel.getCtrY = deprecate_pybind11(
Kernel.getCtrY, reason='Use `getCtr` instead. To be removed after 20.0.0.')
Kernel.setCtrX = deprecate_pybind11(
Kernel.setCtrX, reason='Use `setCtr` instead. To be removed after 20.0.0.')
Kernel.setCtrY = deprecate_pybind11(
Kernel.setCtrY, reason='Use `setCtr` instead. To be removed after 20.0.0.')
# (https://www.lsst.org).
# See the COPYRIGHT file at the top-level directory of this distribution
# for details of code ownership.
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
"""This file only exists to deprecate the Filter and FilterProperty classes.
"""
from lsst.utils.deprecated import deprecate_pybind11
from ._imageLib import VisitInfo
__all__ = []
VisitInfo.getExposureId = deprecate_pybind11(
VisitInfo.getExposureId,
reason=
"Replaced by VisitInfo.id for full focal plane identifiers and by ExposureInfo.id for "
"detector-level identifiers. Will be removed after v25.",
version="v24.0")
