class sUnits(Schema):
length_units = units.getUnits('length')
length = fields.String(validate=validate.OneOf(length_units))
length_micro_units = units.getUnits('length_micro')
length_micro = fields.String(validate=validate.OneOf(length_units))
length_mili_units = units.getUnits('length_mili')
length_mili = fields.String(validate=validate.OneOf(length_units))
length_kilo_units = units.getUnits('length_kilo')
length_kilo = fields.String(validate=validate.OneOf(length_units))
area_units = units.getUnits('area')
area = fields.String(validate=validate.OneOf(area_units))
angle_units = units.getUnits('angle')
angle = fields.String(validate=validate.OneOf(angle_units))
mass_units = units.getUnits('mass')
mass = fields.String(validate=validate.OneOf(mass_units))
time_units = units.getUnits('time')
time = fields.String(validate=validate.OneOf(time_units))
speed_units = units.getUnits('speed')
speed = fields.String(validate=validate.OneOf(speed_units))
acceleration_units = units.getUnits('acceleration')
acceleration = fields.String(validate=validate.OneOf(acceleration_units))
force_units = units.getUnits('force')
force = fields.String(validate=validate.OneOf(force_units))
energy_units = units.getUnits('energy')
energy = fields.String(validate=validate.OneOf(energy_units))
power_units = units.getUnits('power')
power = fields.String(validate=validate.OneOf(power_units))
pressure_units = units.getUnits('pressure')
pressure = fields.String(validate=validate.OneOf(pressure_units))
temperature_units = units.getUnits('temperature')
temperature = fields.String(validate=validate.OneOf(temperature_units))
massflow_units = units.getUnits('massflow')
massflow = fields.String(validate=validate.OneOf(massflow_units))
flow_units = units.getUnits('flow')
flow = fields.String(validate=validate.OneOf(flow_units))
density_units = units.getUnits('density')
density = fields.String(validate=validate.OneOf(density_units))
molecularMass_units = units.getUnits('molecularMass')
molecularMass = fields.String(validate=validate.OneOf(molecularMass_units))
specificVolume_units = units.getUnits('specificVolume')
specificVolume = fields.String(
validate=validate.OneOf(specificVolume_units))
specificEnergy_units = units.getUnits('specificEnergy')
specificEnergy = fields.String(
validate=validate.OneOf(specificEnergy_units))
specificEnergyMolar_units = units.getUnits('specificEnergyMolar')
specificEnergyMolar = fields.String(
validate=validate.OneOf(specificEnergyMolar_units))
specificHeat_units = units.getUnits('specificHeat')
specificHeat = fields.String(validate=validate.OneOf(specificHeat_units))
specificHeatMolar_units = units.getUnits('specificHeatMolar')
specificHeatMolar = fields.String(
validate=validate.OneOf(specificHeatMolar_units))
thermalConductivity_units = units.getUnits('thermalConductivity')
thermalConductivity = fields.String(
validate=validate.OneOf(thermalConductivity_units))
dynViscosity_units = units.getUnits('dynViscosity')
dynViscosity = fields.String(validate=validate.OneOf(dynViscosity_units))
kinViscosity_units = units.getUnits('kinViscosity')
kinViscosity = fields.String(validate=validate.OneOf(kinViscosity_units))
class Meta:
ordered = True
class RoleSchema(Schema):
name = fields.String()
code = fields.String()
source = fields.String(validate=validate.OneOf(["event", "category"]))
class RecipeChangeStatusSchema(SQLAlchemyAutoSchema):
status = fields.Str(required=True,
validate=validate.OneOf(Recipe.STATUSES))
"""Setup the connections plugin."""
if not protocol_registry:
protocol_registry = await context.inject(ProtocolRegistry)
protocol_registry.register_message_types(MESSAGE_TYPES)
BaseConnectionSchema = Schema.from_dict({
'label':
fields.Str(required=True),
'my_did':
fields.Str(required=True),
'connection_id':
fields.Str(required=True),
'state':
fields.Str(validate=validate.OneOf(['pending', 'active', 'error']),
required=True),
'their_did':
fields.Str(required=False), # May be missing if pending
'role':
fields.Str(required=False),
'raw_repr':
fields.Dict(required=False)
})
Connection, ConnectionSchema = generate_model_schema(
name='Connection',
handler='acapy_plugin_toolbox.util.PassHandler',
msg_type=CONNECTION,
schema=BaseConnectionSchema)
class ConnRecordSchema(BaseRecordSchema):
"""Schema to allow serialization/deserialization of connection records."""
class Meta:
"""ConnRecordSchema metadata."""
model_class = ConnRecord
connection_id = fields.Str(
required=False, description="Connection identifier", example=UUIDFour.EXAMPLE
)
my_did = fields.Str(
required=False, description="Our DID for connection", **INDY_DID
)
their_did = fields.Str(
required=False, description="Their DID for connection", **INDY_DID
)
their_label = fields.Str(
required=False, description="Their label for connection", example="Bob"
)
their_role = fields.Str(
required=False,
description="Their role in the connection protocol",
validate=validate.OneOf(
[label for role in ConnRecord.Role for label in role.value]
),
example=ConnRecord.Role.REQUESTER.rfc23,
)
rfc23_state = fields.Str(
dump_only=True,
description="State per RFC 23",
example="invitation-sent",
)
inbound_connection_id = fields.Str(
required=False,
description="Inbound routing connection id to use",
example=UUIDFour.EXAMPLE,
)
invitation_key = fields.Str(
required=False, description="Public key for connection", **INDY_RAW_PUBLIC_KEY
)
invitation_msg_id = fields.Str(
required=False,
description="ID of out-of-band invitation message",
example=UUIDFour.EXAMPLE,
)
request_id = fields.Str(
required=False,
description="Connection request identifier",
example=UUIDFour.EXAMPLE,
)
routing_state = fields.Str(
required=False,
description="Routing state of connection",
validate=validate.OneOf(
[
getattr(ConnRecord, m)
for m in vars(ConnRecord)
if m.startswith("ROUTING_STATE_")
]
),
example=ConnRecord.ROUTING_STATE_ACTIVE,
)
accept = fields.Str(
required=False,
description="Connection acceptance: manual or auto",
example=ConnRecord.ACCEPT_AUTO,
validate=validate.OneOf(
[
getattr(ConnRecord, a)
for a in vars(ConnRecord)
if a.startswith("ACCEPT_")
]
),
)
error_msg = fields.Str(
required=False,
description="Error message",
example="No DIDDoc provided; cannot connect to public DID",
)
invitation_mode = fields.Str(
required=False,
description="Invitation mode",
example=ConnRecord.INVITATION_MODE_ONCE,
validate=validate.OneOf(
[
getattr(ConnRecord, i)
for i in vars(ConnRecord)
if i.startswith("INVITATION_MODE_")
]
),
)
alias = fields.Str(
required=False,
description="Optional alias to apply to connection for later use",
example="Bob, providing quotes",
)
their_public_did = fields.Str(
required=False,
description="Other agent's public DID for connection",
example="2cpBmR3FqGKWi5EyUbpRY8",
)
class TestSchema(Schema):
foo = fields.Integer(
validate=validate.OneOf(mapping.values(), labels=mapping.keys()))
class ChartDataExtrasSchema(Schema):
time_range_endpoints = fields.List(
fields.String(
validate=validate.OneOf(choices=("INCLUSIVE", "EXCLUSIVE")),
description="A list with two values, stating if start/end should be "
"inclusive/exclusive.",
)
)
relative_start = fields.String(
description="Start time for relative time deltas. "
'Default: `config["DEFAULT_RELATIVE_START_TIME"]`',
validate=validate.OneOf(choices=("today", "now")),
)
relative_end = fields.String(
description="End time for relative time deltas. "
'Default: `config["DEFAULT_RELATIVE_START_TIME"]`',
validate=validate.OneOf(choices=("today", "now")),
)
where = fields.String(
description="WHERE clause to be added to queries using AND operator.",
)
having = fields.String(
description="HAVING clause to be added to aggregate queries using "
"AND operator.",
)
having_druid = fields.List(
fields.Nested(ChartDataFilterSchema),
description="HAVING filters to be added to legacy Druid datasource queries.",
)
time_grain_sqla = fields.String(
description="To what level of granularity should the temporal column be "
"aggregated. Supports "
"[ISO 8601](https://en.wikipedia.org/wiki/ISO_8601#Durations) durations.",
validate=validate.OneOf(
choices=(
"PT1S",
"PT1M",
"PT5M",
"PT10M",
"PT15M",
"PT0.5H",
"PT1H",
"P1D",
"P1W",
"P1M",
"P0.25Y",
"P1Y",
"1969-12-28T00:00:00Z/P1W", # Week starting Sunday
"1969-12-29T00:00:00Z/P1W", # Week starting Monday
"P1W/1970-01-03T00:00:00Z", # Week ending Saturday
"P1W/1970-01-04T00:00:00Z", # Week ending Sunday
),
),
example="P1D",
allow_none=True,
)
druid_time_origin = fields.String(
description="Starting point for time grain counting on legacy Druid "
"datasources. Used to change e.g. Monday/Sunday first-day-of-week.",
allow_none=True,
)
class ReportSchedulePutSchema(Schema):
type = fields.String(
description=type_description,
required=False,
validate=validate.OneOf(choices=tuple(key.value
for key in ReportScheduleType)),
)
name = fields.String(description=name_description,
required=False,
validate=[Length(1, 150)])
description = fields.String(
description=description_description,
allow_none=True,
required=False,
example="Daily sales dashboard to marketing",
)
context_markdown = fields.String(description=context_markdown_description,
allow_none=True,
required=False)
active = fields.Boolean(required=False)
crontab = fields.String(
description=crontab_description,
validate=[validate_crontab, Length(1, 1000)],
required=False,
)
timezone = fields.String(
description=timezone_description,
default="UTC",
validate=validate.OneOf(choices=tuple(all_timezones)),
)
sql = fields.String(
description=sql_description,
example="SELECT value FROM time_series_table",
required=False,
allow_none=True,
)
chart = fields.Integer(required=False, allow_none=True)
creation_method = EnumField(
ReportCreationMethodType,
by_value=True,
allow_none=True,
description=creation_method_description,
)
dashboard = fields.Integer(required=False, allow_none=True)
database = fields.Integer(required=False)
owners = fields.List(fields.Integer(description=owners_description),
required=False)
validator_type = fields.String(
description=validator_type_description,
validate=validate.OneOf(choices=tuple(
key.value for key in ReportScheduleValidatorType)),
allow_none=True,
required=False,
)
validator_config_json = fields.Nested(ValidatorConfigJSONSchema,
required=False)
log_retention = fields.Integer(
description=log_retention_description,
example=90,
required=False,
validate=[Range(min=1, error=_("Value must be greater than 0"))],
)
grace_period = fields.Integer(
description=grace_period_description,
example=60 * 60 * 4,
required=False,
validate=[Range(min=1, error=_("Value must be greater than 0"))],
)
working_timeout = fields.Integer(
description=working_timeout_description,
example=60 * 60 * 1,
allow_none=True,
required=False,
validate=[Range(min=1, error=_("Value must be greater than 0"))],
)
recipients = fields.List(fields.Nested(ReportRecipientSchema),
required=False)
report_format = fields.String(
default=ReportDataFormat.VISUALIZATION,
validate=validate.OneOf(choices=tuple(key.value
for key in ReportDataFormat)),
)
force_screenshot = fields.Boolean(default=False)
class PersonOrOrganizationSchema(Schema):
"""Person or Organization schema."""
NAMES = [
"organizational",
"personal"
]
type = SanitizedUnicode(
required=True,
validate=validate.OneOf(
choices=NAMES,
error=_(f'Invalid value. Choose one of {NAMES}.')
),
error_messages={
# [] needed to mirror error message above
"required": [_(f'Invalid value. Choose one of {NAMES}.')]
}
)
name = SanitizedUnicode()
given_name = SanitizedUnicode()
family_name = SanitizedUnicode()
identifiers = IdentifierSet(
fields.Nested(partial(
IdentifierSchema,
# It is intended to allow org schemes to be sent as personal
# and viceversa. This is a trade off learnt from running
# Zenodo in production.
allowed_schemes=["orcid", "isni", "gnd", "ror"]
))
)
@validates_schema
def validate_names(self, data, **kwargs):
"""Validate names based on type."""
if data['type'] == "personal":
if not data.get('family_name'):
messages = [_("Family name must be filled.")]
raise ValidationError({
"family_name": messages
})
elif data['type'] == "organizational":
if not data.get('name'):
messages = [_('Name cannot be blank.')]
raise ValidationError({"name": messages})
@post_load
def update_names(self, data, **kwargs):
"""Update names for organization / person.
Fill name from given_name and family_name if person.
Remove given_name and family_name if organization.
"""
if data["type"] == "personal":
names = [data.get("family_name"), data.get("given_name")]
data["name"] = ", ".join([n for n in names if n])
elif data['type'] == "organizational":
if 'family_name' in data:
del data['family_name']
if 'given_name' in data:
del data['given_name']
return data
class ValidatorConfigJSONSchema(Schema):
op = fields.String( # pylint: disable=invalid-name
description=validator_config_json_op_description,
validate=validate.OneOf(choices=["<", "<=", ">", ">=", "==", "!="]),
)
threshold = fields.Float()
class ReportSchedulePostSchema(Schema):
type = fields.String(
description=type_description,
allow_none=False,
required=True,
validate=validate.OneOf(choices=tuple(key.value
for key in ReportScheduleType)),
)
name = fields.String(
description=name_description,
allow_none=False,
required=True,
validate=[Length(1, 150)],
example="Daily dashboard email",
)
description = fields.String(
description=description_description,
allow_none=True,
required=False,
example="Daily sales dashboard to marketing",
)
context_markdown = fields.String(description=context_markdown_description,
allow_none=True,
required=False)
active = fields.Boolean()
crontab = fields.String(
description=crontab_description,
validate=[validate_crontab, Length(1, 1000)],
example="*/5 * * * *",
allow_none=False,
required=True,
)
timezone = fields.String(
description=timezone_description,
default="UTC",
validate=validate.OneOf(choices=tuple(all_timezones)),
)
sql = fields.String(description=sql_description,
example="SELECT value FROM time_series_table")
chart = fields.Integer(required=False, allow_none=True)
creation_method = EnumField(
ReportCreationMethodType,
by_value=True,
required=False,
description=creation_method_description,
)
dashboard = fields.Integer(required=False, allow_none=True)
database = fields.Integer(required=False)
owners = fields.List(fields.Integer(description=owners_description))
validator_type = fields.String(
description=validator_type_description,
validate=validate.OneOf(choices=tuple(
key.value for key in ReportScheduleValidatorType)),
)
validator_config_json = fields.Nested(ValidatorConfigJSONSchema)
log_retention = fields.Integer(
description=log_retention_description,
example=90,
validate=[Range(min=1, error=_("Value must be greater than 0"))],
)
grace_period = fields.Integer(
description=grace_period_description,
example=60 * 60 * 4,
default=60 * 60 * 4,
validate=[Range(min=1, error=_("Value must be greater than 0"))],
)
working_timeout = fields.Integer(
description=working_timeout_description,
example=60 * 60 * 1,
default=60 * 60 * 1,
validate=[Range(min=1, error=_("Value must be greater than 0"))],
)
recipients = fields.List(fields.Nested(ReportRecipientSchema))
report_format = fields.String(
default=ReportDataFormat.VISUALIZATION,
validate=validate.OneOf(choices=tuple(key.value
for key in ReportDataFormat)),
)
force_screenshot = fields.Boolean(default=False)
@validates_schema
def validate_report_references( # pylint: disable=unused-argument,no-self-use
self, data: Dict[str, Any], **kwargs: Any) -> None:
if data["type"] == ReportScheduleType.REPORT:
if "database" in data:
raise ValidationError({
"database":
["Database reference is not allowed on a report"]
})
class AnnotationLayerSchema(Schema):
annotationType = fields.String(
description="Type of annotation layer",
validate=validate.OneOf(choices=[ann.value for ann in AnnotationType]),
)
color = fields.String(
description="Layer color",
allow_none=True,
)
descriptionColumns = fields.List(
fields.String(),
description="Columns to use as the description. If none are provided, "
"all will be shown.",
)
hideLine = fields.Boolean(
description="Should line be hidden. Only applies to line annotations",
allow_none=True,
)
intervalEndColumn = fields.String(
description=(
"Column containing end of interval. Only applies to interval layers"
),
allow_none=True,
)
name = fields.String(description="Name of layer", required=True)
opacity = fields.String(
description="Opacity of layer",
validate=validate.OneOf(
choices=("", "opacityLow", "opacityMedium", "opacityHigh"),
),
allow_none=True,
required=False,
)
overrides = fields.Dict(
keys=fields.String(
desciption="Name of property to be overridden",
validate=validate.OneOf(
choices=("granularity", "time_grain_sqla", "time_range", "time_shift"),
),
),
values=fields.Raw(allow_none=True),
description="which properties should be overridable",
allow_none=True,
)
show = fields.Boolean(description="Should the layer be shown", required=True)
showLabel = fields.Boolean(
description="Should the label always be shown",
allow_none=True,
)
showMarkers = fields.Boolean(
description="Should markers be shown. Only applies to line annotations.",
required=True,
)
sourceType = fields.String(
description="Type of source for annotation data",
validate=validate.OneOf(
choices=(
"",
"line",
"NATIVE",
"table",
)
),
)
style = fields.String(
description="Line style. Only applies to time-series annotations",
validate=validate.OneOf(
choices=(
"dashed",
"dotted",
"solid",
"longDashed",
)
),
)
timeColumn = fields.String(
description="Column with event date or interval start date",
allow_none=True,
)
titleColumn = fields.String(
description="Column with title",
allow_none=True,
)
width = fields.Float(
description="Width of annotation line",
validate=[
Range(
min=0,
min_inclusive=True,
error=_("`width` must be greater or equal to 0"),
)
],
)
value = fields.Raw(
description="For formula annotations, this contains the formula. "
"For other types, this is the primary key of the source object.",
required=True,
)
class ChartDataBoxplotOptionsSchema(ChartDataPostProcessingOperationOptionsSchema):
"""
Boxplot operation config.
"""
groupby = fields.List(
fields.String(
description="Columns by which to group the query.",
),
allow_none=True,
)
metrics = fields.List(
fields.Raw(),
description="Aggregate expressions. Metrics can be passed as both "
"references to datasource metrics (strings), or ad-hoc metrics"
"which are defined only within the query object. See "
"`ChartDataAdhocMetricSchema` for the structure of ad-hoc metrics. "
"When metrics is undefined or null, the query is executed without a groupby. "
"However, when metrics is an array (length >= 0), a groupby clause is added to "
"the query.",
allow_none=True,
)
whisker_type = fields.String(
description="Whisker type. Any numpy function will work.",
validate=validate.OneOf(
choices=([val.value for val in PostProcessingBoxplotWhiskerType])
),
required=True,
example="tukey",
)
percentiles = fields.Tuple(
(
fields.Float(
description="Lower percentile",
validate=[
Range(
min=0,
max=100,
min_inclusive=False,
max_inclusive=False,
error=_(
"lower percentile must be greater than 0 and less "
"than 100. Must be lower than upper percentile."
),
),
],
),
fields.Float(
description="Upper percentile",
validate=[
Range(
min=0,
max=100,
min_inclusive=False,
max_inclusive=False,
error=_(
"upper percentile must be greater than 0 and less "
"than 100. Must be higher than lower percentile."
),
),
],
),
),
description="Upper and lower percentiles for percentile whisker type.",
example=[1, 99],
)
class ChartDataResponseResult(Schema):
annotation_data = fields.List(
fields.Dict(
keys=fields.String(description="Annotation layer name"),
values=fields.String(),
),
description="All requested annotation data",
allow_none=True,
)
cache_key = fields.String(
description="Unique cache key for query object",
required=True,
allow_none=True,
)
cached_dttm = fields.String(
description="Cache timestamp",
required=True,
allow_none=True,
)
cache_timeout = fields.Integer(
description="Cache timeout in following order: custom timeout, datasource "
"timeout, default config timeout.",
required=True,
allow_none=True,
)
error = fields.String(
description="Error",
allow_none=True,
)
is_cached = fields.Boolean(
description="Is the result cached",
required=True,
allow_none=None,
)
query = fields.String(
description="The executed query statement",
required=True,
allow_none=False,
)
status = fields.String(
description="Status of the query",
validate=validate.OneOf(
choices=(
"stopped",
"failed",
"pending",
"running",
"scheduled",
"success",
"timed_out",
)
),
allow_none=False,
)
stacktrace = fields.String(
desciption="Stacktrace if there was an error",
allow_none=True,
)
rowcount = fields.Integer(
description="Amount of rows in result set",
allow_none=False,
)
data = fields.List(fields.Dict(), description="A list with results")
colnames = fields.List(fields.String(), description="A list of column names")
coltypes = fields.List(
fields.Integer(), description="A list of generic data types of each column"
)
applied_filters = fields.List(
fields.Dict(), description="A list with applied filters"
)
rejected_filters = fields.List(
fields.Dict(), description="A list with rejected filters"
)
from_dttm = fields.Integer(
desciption="Start timestamp of time range", required=False, allow_none=True
)
to_dttm = fields.Integer(
desciption="End timestamp of time range", required=False, allow_none=True
)
)
MEDIATION_ID_SCHEMA = fields.UUID(
description="Mediation record identifier",
example=UUIDFour.EXAMPLE,
)
MEDIATION_STATE_SCHEMA = fields.Str(
description="Mediation state (optional)",
required=False,
validate=validate.OneOf(
[
getattr(MediationRecord, m)
for m in vars(MediationRecord)
if m.startswith("STATE_")
]
),
example=MediationRecord.STATE_GRANTED,
)
MEDIATOR_TERMS_SCHEMA = fields.List(
fields.Str(
description=(
"Indicate terms to which the mediator requires the recipient to agree"
)
),
required=False,
description="List of mediator rules for recipient",
class ChartDataRollingOptionsSchema(ChartDataPostProcessingOperationOptionsSchema):
"""
Rolling operation config.
"""
columns = (
fields.Dict(
description="columns on which to perform rolling, mapping source column to "
"target column. For instance, `{'y': 'y'}` will replace the "
"column `y` with the rolling value in `y`, while `{'y': 'y2'}` "
"will add a column `y2` based on rolling values calculated "
"from `y`, leaving the original column `y` unchanged.",
example={"weekly_rolling_sales": "sales"},
),
)
rolling_type = fields.String(
description="Type of rolling window. Any numpy function will work.",
validate=validate.OneOf(
choices=(
"average",
"argmin",
"argmax",
"cumsum",
"cumprod",
"max",
"mean",
"median",
"nansum",
"nanmin",
"nanmax",
"nanmean",
"nanmedian",
"min",
"percentile",
"prod",
"product",
"std",
"sum",
"var",
)
),
required=True,
example="percentile",
)
window = fields.Integer(
description="Size of the rolling window in days.", required=True, example=7,
)
rolling_type_options = fields.Dict(
desctiption="Optional options to pass to rolling method. Needed for "
"e.g. quantile operation.",
example={},
)
center = fields.Boolean(
description="Should the label be at the center of the window. Default: `false`",
example=False,
)
win_type = fields.String(
description="Type of window function. See "
"[SciPy window functions](https://docs.scipy.org/doc/scipy/reference"
"/signal.windows.html#module-scipy.signal.windows) "
"for more details. Some window functions require passing "
"additional parameters to `rolling_type_options`. For instance, "
"to use `gaussian`, the parameter `std` needs to be provided.",
validate=validate.OneOf(
choices=(
"boxcar",
"triang",
"blackman",
"hamming",
"bartlett",
"parzen",
"bohman",
"blackmanharris",
"nuttall",
"barthann",
"kaiser",
"gaussian",
"general_gaussian",
"slepian",
"exponential",
)
),
)
min_periods = fields.Integer(
description="The minimum amount of periods required for a row to be included "
"in the result set.",
example=7,
)
DELETE_CONNECTION: 'acapy_plugin_toolbox.connections'
'.DeleteConnection',
CONNECTION_ACK: 'acapy_plugin_toolbox.connections'
'.ConnectionAck',
UPDATE_CONNECTION: 'acapy_plugin_toolbox.connections'
'.UpdateConnection',
}
ConnectionGetList, ConnectionGetListSchema = generate_model_schema(
name='ConnectionGetList',
handler='acapy_plugin_toolbox.connections.ConnectionGetListHandler',
msg_type=CONNECTION_GET_LIST,
schema={
'initiator':
fields.Str(
validate=validate.OneOf(['self', 'external']),
required=False,
),
'invitation_key':
fields.Str(required=False),
'my_did':
fields.Str(required=False),
'state':
fields.Str(validate=validate.OneOf([
'init', 'invitation', 'request', 'response', 'active', 'error',
'inactive'
]),
required=False),
'their_did':
fields.Str(required=False),
'their_role':
class ExperimentSchema(Schema):
_version_ = fields.Constant(extrap.__version__, data_key=extrap.__title__)
scaling = fields.Str(required=False, allow_none=True, validate=validate.OneOf(['strong', 'weak']))
parameters = fields.List(fields.Nested(ParameterSchema))
measurements = TupleKeyDict(keys=(fields.Nested(CallpathSchema), fields.Nested(MetricSchema)),
values=fields.List(fields.Nested(MeasurementSchema, exclude=('callpath', 'metric'))))
modelers = fields.List(fields.Nested(ModelGeneratorSchema), missing=[], required=False)
def set_progress_bar(self, pbar):
self.context['progress_bar'] = pbar
@pre_load
def add_progress(self, data, **kwargs):
file_version = data.get(extrap.__title__)
if file_version:
prog_version = Version(extrap.__version__)
file_version = Version(file_version)
if prog_version < file_version:
if prog_version.major != file_version.major or prog_version.minor != file_version.minor:
warnings.warn(
f"The loaded experiment was created with a newer version ({file_version}) of Extra-P. "
f"This Extra-P version ({prog_version}) might not work correctly with this experiment.")
else:
logging.info(
f"The loaded experiment was created with a newer version ({file_version}) of Extra-P. ")
if 'progress_bar' in self.context:
pbar = self.context['progress_bar']
models = 0
ms = data.get('measurements')
if ms:
for cp in ms.values():
for m in cp.values():
models += 1
pbar.total += len(m)
pbar.total += models
ms = data.get('modelers')
if ms:
pbar.total += len(ms)
pbar.total += len(ms) * models
pbar.update(0)
return data
def create_object(self):
return Experiment()
def postprocess_object(self, obj: Experiment):
if 'progress_bar' in self.context:
pbar = self.context['progress_bar']
else:
pbar = DUMMY_PROGRESS
for (callpath, metric), measurement in obj.measurements.items():
obj.add_callpath(callpath)
obj.add_metric(metric)
for m in measurement:
obj.add_coordinate(m.coordinate)
m.callpath = callpath
m.metric = metric
pbar.update()
obj.call_tree = io_helper.create_call_tree(obj.callpaths)
for modeler in obj.modelers:
modeler.experiment = obj
for key, model in modeler.models.items():
model.measurements = obj.measurements[key]
pbar.update()
return obj