def draw_boxxyerrorbar(axis, plot, alpha=0.25, draw_labels = False):
"""
Gnuplot-like errorbars
"""
axis.update_limits(plot, padding = 0.05)
from matplotlib.collections import PatchCollection
r = boxxyerrorbar(plot.xmin, plot.xmax, plot.ymin, plot.ymax)
pc = PatchCollection(r, facecolor=plot.color,
edgecolor='None', alpha=alpha)
if not plot.color: # maybe the plot did not contain a color, let's give it some color!
if isinstance(pc, (tuple, list)):
color = pc[0].get_facecolor()
else:
color = pc.get_facecolor()
# Update the plot color
plot.set_plot_parameters(color = color)
if draw_labels:
axis.draw_labels(plot)
axis.add_collection(pc)
def tod3D(tod,
dets=None,
time_resolution=2.,
prange=[None, None],
sky_coords=False,
pointingpar=None,
anim_time=10.,
display='show',
filename=None,
**kwargs):
"""3D visualization of a TOD: animation of the 2D focal plane through the TOD
Arguments:
----------
- tod: TOD object to visualize
Optional:
---------
- dets: list of detectors to plot (default will use tod.det_uid)
- time_resolution: Tod will be downsample to reach a time resolution
as close as possible to the input using a power of
2 resampling (every 2**n samples).
Default is 2s
- prange: scale
- sky_coords: if True, project the focal plane on the sky and show the TOD animation in RA, DEC (must provide pointingpar)
- pointingpar: focal plane model, eg. {'source': 'fp_file',
'filename': '.../RelativeOffsets/template_ar2_150529s.txt'}
- anim_time: total time of the animated TOD in seconds
- display: 'show' or 'save'
- filename: only if display=='save', by default: todname.gif
- other args to define the animation (interval, repeat, repeat_delay...)
"""
if dets is None:
dets = tod.det_uid
# Re-sampling
tres = (tod.ctime[-1] - tod.ctime[0]) / tod.nsamps
r = time_resolution / tres
Nresamp = 2**np.ceil(np.log2(r))
tod_ds = tod.copy(resample=Nresamp)
print("Downsampled tod has %i samples, with time resolution of %.2fs" %
(tod_ds.nsamps,
(tod_ds.ctime[-1] - tod_ds.ctime[0]) / tod_ds.nsamps))
# Get focal plane infos
if sky_coords:
x, y = get_sky_coords(tod_ds, pointingpar)
x = x[dets]
y = y[dets]
x *= 180. / np.pi
y *= 180. / np.pi
if x.max() - x.min() > 180.: x[x < 0] += 360.
if y.max() - y.min() > 180.: y[y < 0] += 360.
else:
x = tod.info.array_data['sky_x'][dets]
y = tod.info.array_data['sky_y'][dets]
polfamily = tod.info.array_data['pol_family'][dets]
# Get limits fot the plot
if sky_coords:
x_lim = (x.min(), x.max())
y_lim = (y.min(), y.max())
else:
x_lim, y_lim = get_array_plot_lims(tod.info.array, tod.info.season)
pmin, pmax = prange
if pmin == None:
pmin = tod.data[dets].min()
if pmax == None:
pmax = tod.data[dets].max()
plt.ioff()
# Create animation
fig = plt.figure(figsize=(7, 8))
ax1 = fig.add_axes([0.1, 0.2, 0.8, 0.7])
if sky_coords:
ax1.tick_params(bottom='off',
top='on',
right='off',
left='on',
labelbottom='off',
labelleft='on',
labeltop='on',
which='both')
else:
ax1.tick_params(bottom='off',
top='off',
right='off',
left='off',
labelbottom='off',
labelleft='off',
which='both')
ax2 = fig.add_axes([0.1, 0.1, 0.8, 0.1])
ax2.plot(tod_ds.ctime - tod_ds.ctime[0],
tod_ds.data[dets].T,
'b',
alpha=0.1)
ax1.set_xlim(x_lim)
ax1.set_ylim(y_lim)
ax2.set_xlim((0, tod_ds.ctime[-1] - tod_ds.ctime[0]))
ax2.set_ylim((pmin, pmax))
ax2.set_yticks((pmin, 0, pmax))
if sky_coords:
ax1.set_xlabel('RA (degrees)')
ax1.set_ylabel('DEC (degrees)')
ax2.set_xlabel('Time [s]')
ax2.set_ylabel('pW')
plt.figtext(0.5,
0.95,
'%s' % tod_ds.info.basename,
ha='center',
va='center',
fontsize='xx-large')
if not sky_coords:
plot_wafer_names(ax1, tod_ds.info.array)
line = ax2.axvline(0, color='r')
color = get_color(tod_ds.data[dets, 0], pmax=pmax, pmin=pmin)
colors = [
get_color(tod_ds.data[dets, i], pmax=pmax, pmin=pmin)
for i in range(tod_ds.nsamps)
]
if sky_coords:
# pos = x[:,0], y[:,0]
patchlists = [
PatchCollection(
get_patches((x[:, i], y[:, i]), colors[i], polfamily))
for i in range(tod_ds.nsamps)
]
ax1.add_collection(patchlists[0])
else:
pos = x, y
patchlist = PatchCollection(get_patches(pos, colors[0], polfamily))
print(patchlist.get_facecolor())
# p = patchlist[0]
# ax1.add_patch(p)
ax1.add_collection(patchlist)
def animate(i):
if sky_coords:
patchlist = patchlists[i]
color = colors[i]
patchlist.set_facecolors(color)
patchlist.set_edgecolors(color)
ax1.collections.pop()
ax1.add_collection(patchlist)
else:
patchlist = ax1.collections[0]
color = colors[i]
patchlist.set_facecolors(color)
patchlist.set_edgecolors(color)
line.set_xdata(tod_ds.ctime[i] - tod_ds.ctime[0])
return line
interval = float(anim_time) / tod_ds.nsamps * 1000
ani = animation.FuncAnimation(fig,
animate,
np.arange(tod_ds.nsamps),
interval=interval,
**kwargs)
if display == 'show':
plt.ion()
plt.show()
plt.draw()
elif display == 'save':
if filename is None:
filename = '%s.gif' % tod_ds.info.basename
Writer = animation.writers['imagemagick_file']
writer = Writer(fps=1 / interval * 1000)
ani.save(filename, writer=writer)
plt.close()
