def test_filter_fields(mds_all):
mds = mds_all
temperature_ramp.run(mds)
db = Broker(mds, fs=None)
hdr = db[-1]
unwanted_fields = ['point_det']
out = nexus.filter_fields(hdr, unwanted_fields)
#original list is ('point_det', 'boolean_det', 'ccd_det_info', 'Tsam'),
# only ('boolean_det', 'ccd_det_info', 'Tsam') left after filtering out
assert len(out)==3
def test_hdf5_export_single():
"""
Test the hdf5 export with a single header and
verify the output is correct
"""
temperature_ramp.run()
hdr = db[-1]
fname = tempfile.NamedTemporaryFile()
hdf5.export(hdr, fname.name)
shallow_header_verify(fname.name, hdr)
def test_filter_fields(mds_all):
mds = mds_all
temperature_ramp.run(mds)
db = Broker(mds, fs=None)
hdr = db[-1]
unwanted_fields = ['point_det']
out = hdf5.filter_fields(hdr, unwanted_fields)
#original list is ('point_det', 'boolean_det', 'ccd_det_info', 'Tsam'),
# only ('boolean_det', 'ccd_det_info', 'Tsam') left after filtering out
assert len(out)==3
def test_hdf5_export_single():
"""
Test the hdf5 export with a single header and
verify the output is correct
"""
temperature_ramp.run()
hdr = db[-1]
fname = tempfile.NamedTemporaryFile()
hdf5.export(hdr, fname.name)
shallow_header_verify(fname.name, hdr)
def test_hdf5_export_with_fields_single(mds_all):
"""
Test the hdf5 export with a single header and
verify the output is correct; fields kwd is used.
"""
mds = mds_all
temperature_ramp.run(mds)
db = Broker(mds, fs=None)
hdr = db[-1]
fname = tempfile.NamedTemporaryFile()
hdf5.export(hdr, fname.name, mds, fields=['point_dev'])
shallow_header_verify(fname.name, hdr, mds, fields=['point_dev'])
def test_hdf5_export_single_stream_name(mds_all):
"""
Test the hdf5 export with a single header and
verify the output is correct. No uid is used.
"""
mds = mds_all
temperature_ramp.run(mds)
db = Broker(mds, fs=None)
hdr = db[-1]
fname = tempfile.NamedTemporaryFile()
hdf5.export(hdr, fname.name, mds, stream_name='primary')
shallow_header_verify(fname.name, hdr, mds, stream_name='primary')
def test_hdf5_export_list():
"""
Test the hdf5 export with a list of headers and
verify the output is correct
"""
temperature_ramp.run()
temperature_ramp.run()
hdrs = db[-2:]
fname = tempfile.NamedTemporaryFile()
# test exporting a list of headers
hdf5.export(hdrs, fname.name)
for hdr in hdrs:
shallow_header_verify(fname.name, hdr)
def test_nexus_export_single_no_uid(mds_all):
"""
Test the NeXus HDF5 export with a single header and
verify the output is correct. No uid is used.
"""
mds = mds_all
temperature_ramp.run(mds)
db = Broker(mds, fs=None)
hdr = db[-1]
fname = tempfile.NamedTemporaryFile()
nexus.export(hdr, fname.name, mds, use_uid=False)
shallow_header_verify(fname.name, hdr, mds, use_uid=False)
validate_basic_NeXus_structure(fname.name)
def setup():
mds_setup()
global blc_uid, run_start_uid, document_insertion_time
document_insertion_time = ttime.time()
temperature_ramp.run()
blc_uid = mdsc.insert_beamline_config({}, time=document_insertion_time)
run_start_uid = mdsc.insert_run_start(scan_id=3022013,
beamline_id='testbed',
beamline_config=blc_uid,
owner='tester',
group='awesome-devs',
project='Nikea',
time=document_insertion_time)
def test_hdf5_export_list():
"""
Test the hdf5 export with a list of headers and
verify the output is correct
"""
temperature_ramp.run()
temperature_ramp.run()
hdrs = db[-2:]
fname = tempfile.NamedTemporaryFile()
# test exporting a list of headers
hdf5.export(hdrs, fname.name)
for hdr in hdrs:
shallow_header_verify(fname.name, hdr)
def filled_mds(mds_all_mod):
mdsc = mds_all_mod
temperature_ramp.run(mdsc)
run_start_uid = mdsc.insert_run_start(scan_id=3022013,
beamline_id='testbed',
owner='tester',
group='awesome-devs',
project='Nikea',
time=time.time(),
uid=str(uuid.uuid4()))
rs = mdsc.run_start_given_uid(run_start_uid)
return mdsc, run_start_uid, rs
def setup():
mds_setup()
global run_start_uid, document_insertion_time
document_insertion_time = ttime.time()
temperature_ramp.run()
run_start_uid = mdsc.insert_run_start(scan_id=3022013,
beamline_id='testbed',
owner='tester',
group='awesome-devs',
project='Nikea',
time=document_insertion_time,
uid=str(uuid.uuid4()))
def setup_module(module):
mds_setup()
global run_start_uid, document_insertion_time
document_insertion_time = ttime.time()
temperature_ramp.run()
run_start_uid = mdsc.insert_run_start(scan_id=3022013,
beamline_id='testbed',
owner='tester',
group='awesome-devs',
project='Nikea',
time=document_insertion_time,
uid=str(uuid.uuid4()))
def test_hdf5_export_list(mds_all):
"""
Test the hdf5 export with a list of headers and
verify the output is correct
"""
mds = mds_all
temperature_ramp.run(mds)
temperature_ramp.run(mds)
db = Broker(mds, fs=None)
hdrs = db[-2:]
fname = tempfile.NamedTemporaryFile()
# test exporting a list of headers
hdf5.export(hdrs, fname.name, mds)
for hdr in hdrs:
shallow_header_verify(fname.name, hdr, mds)
def test_nexus_export_list(mds_all):
"""
Test the NeXus HDF5 export with a list of headers and
verify the output is correct
"""
mds = mds_all
temperature_ramp.run(mds)
temperature_ramp.run(mds)
db = Broker(mds, fs=None)
hdrs = db[-2:]
fname = tempfile.NamedTemporaryFile()
# test exporting a list of headers
nexus.export(hdrs, fname.name, mds)
for hdr in hdrs:
shallow_header_verify(fname.name, hdr, mds)
validate_basic_NeXus_structure(fname.name)
def test_temperature_ramp(mds_all):
temperature_ramp.run(mds_all)
def test_temperature_ramp():
temperature_ramp.run()
def _failing_sleepy_ramp_helper(delay_time):
# any non-zero values should work
temperature_ramp.run(sleep=delay_time)
def test_temperature_ramp():
temperature_ramp.run()
def test_temperature_ramp(mds_all):
temperature_ramp.run(mds_all)
