def test_translate_gi_to_tax_id(taxa_db_simple):
tup = ['query', 'gi|4|else', 90., 80, 60, 2, 30, 80,
1100, 1150, 1e-7, 64.5, []]
blast1 = metagenomics.BlastRecord(*tup)
tup[1] = 5
expected = metagenomics.BlastRecord(*tup)
assert metagenomics.translate_gi_to_tax_id(taxa_db_simple, blast1) == expected
def test_paired_query_id():
tup = ['query', 'gi|10|else', 90., 80, 60, 2, 30, 80,
1100, 1150, 1e-7, 64.5, []]
blast1 = metagenomics.BlastRecord(*tup)
assert metagenomics.paired_query_id(blast1) == blast1
new_tup = copy.copy(tup)
new_tup[0] = 'query/1'
new_blast1 = metagenomics.BlastRecord(*new_tup)
assert metagenomics.paired_query_id(new_blast1) == blast1
new_tup = copy.copy(tup)
new_tup[0] = 'query/2'
new_blast1 = metagenomics.BlastRecord(*new_tup)
assert metagenomics.paired_query_id(new_blast1) == blast1
new_tup = copy.copy(tup)
new_tup[0] = 'query/3'
new_blast1 = metagenomics.BlastRecord(*new_tup)
assert metagenomics.paired_query_id(new_blast1) == new_blast1
