Python NIFTI_interface.load_segmentation Examples

Example #1

 def test_IOI_NIFTI_loading(self):
     interface = NIFTI_interface(pattern="nifti")
     sample_list = interface.initialize(self.tmp_data.name)
     img = interface.load_image(sample_list[0])
     seg = interface.load_segmentation(sample_list[0])
     details = interface.load_details(sample_list[0])
     self.assertTrue(np.array_equal(img, self.img))
     self.assertTrue(np.array_equal(seg, self.seg))

Example #2

File: test_iointerfaces.py Project: sosaz009/MIScnn

 def test_IOI_NIFTI_loading(self):
     interface = NIFTI_interface(pattern="nifti")
     sample_list = interface.initialize(self.tmp_data.name)
     img, extended = interface.load_image(sample_list[0])
     # Create a Sample object
     sample = MIScnn_sample.Sample(sample_list[0], img, interface.channels, interface.classes, extended)
     seg = interface.load_segmentation(sample_list[0])
     
     self.assertTrue(np.array_equal(img, self.img))
     self.assertTrue(np.array_equal(seg, self.seg))