Python _get_mgz_header Examples

Example #1

File: test_source_space.py Project: teonbrooks/mne-python

def test_mgz_header():
    """Test MGZ header reading."""
    header = _get_mgz_header(fname_mri)
    mri_hdr = _get_mri_header(fname_mri)
    assert_allclose(mri_hdr.get_data_shape(), header['dims'])
    assert_allclose(mri_hdr.get_vox2ras_tkr(), header['vox2ras_tkr'])
    assert_allclose(mri_hdr.get_ras2vox(), header['ras2vox'])

Example #2

File: test_source_space.py Project: lengyelgabor/mne-python

def test_mgz_header():
    import nibabel as nib
    header = _get_mgz_header(fname_mri)
    mri_hdr = nib.load(fname_mri).get_header()
    assert_allclose(mri_hdr.get_data_shape(), header['dims'])
    assert_allclose(mri_hdr.get_vox2ras_tkr(), header['vox2ras_tkr'])
    assert_allclose(mri_hdr.get_ras2vox(), header['ras2vox'])

Example #3

File: test_source_space.py Project: yukids123/mne-python

def test_mgz_header():
    """Test MGZ header reading."""
    header = _get_mgz_header(fname_mri)
    mri_hdr = _get_mri_header(fname_mri)
    assert_allclose(mri_hdr.get_data_shape(), header['dims'])
    assert_allclose(mri_hdr.get_vox2ras_tkr(), header['vox2ras_tkr'])
    assert_allclose(mri_hdr.get_ras2vox(), header['ras2vox'])

Example #4

File: test_source_space.py Project: jaeilepp/eggie

def test_mgz_header():
    import nibabel as nib
    header = _get_mgz_header(fname_mri)
    mri_hdr = nib.load(fname_mri).get_header()
    assert_allclose(mri_hdr.get_data_shape(), header['dims'])
    assert_allclose(mri_hdr.get_vox2ras_tkr(), header['vox2ras_tkr'])
    assert_allclose(mri_hdr.get_ras2vox(), header['ras2vox'])

Example #5

File: test_source_space.py Project: yuvfried/mne-python

def test_mgz_header():
    """Test MGZ header reading."""
    import nibabel
    header = _get_mgz_header(fname_mri)
    mri_hdr = nibabel.load(fname_mri).header
    assert_allclose(mri_hdr.get_data_shape(), header['dims'])
    assert_allclose(mri_hdr.get_vox2ras_tkr(), header['vox2ras_tkr'])
    assert_allclose(mri_hdr.get_ras2vox(), np.linalg.inv(header['vox2ras']))