def test_remove(test_chanjodb, case_id):
# GIVEN a database with a sample (group) loaded
assert coverage.is_loaded(case_id) is True
# WHEN removing the group of samples
coverage.remove(test_chanjodb, group_id=case_id)
# THEN the samples are not loaded anymore
assert coverage.is_loaded(case_id) is False
def test_parse_payload(analysis_payload, config, case_id):
"""Process payload for coverage."""
# GIVEN an empty chanjo database
assert coverage.is_loaded(case_id) is False
# WHEN processing an `ANALYSIS_DONE` payload
coverage.parse_payload(db=None, payload=analysis_payload, config=config)
# THEN the sample is loaded
assert coverage.is_loaded(case_id) is True
def test_existing_is_loaded(test_chanjodb, case_id):
# GIVEN a populated database
# WHEN checking if the loaded group of samples are loaded
was_loaded = coverage.is_loaded(group_id=case_id)
# THEN is should indicate that the samples are already loaded
assert was_loaded is True
def test_is_loaded(chanjo_db, case_id):
# GIVEN an empty database
# WHEN checking if any group of samples are loaded
was_loaded = coverage.is_loaded(group_id=case_id)
# THEN it should indicate they aren't loaded
assert was_loaded is False