Example #1
0
def calcAllSurfErrZ(ii,options,args):
    #Go through all of the bins
    if options.sample.lower() == 'g':
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    savefile.close()
    if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                    k=(options.sample.lower() == 'k')) /8.) > -0.5:
        return numpy.zeros((101,4))
    if _NOTDONEYET:
        spl= options.restart.split('.')
    else:
        spl= args[0].split('.')
    newname= ''
    for jj in range(len(spl)-1):
        newname+= spl[jj]
        if not jj == len(spl)-2: newname+= '.'
    newname+= '_%i.' % ii
    newname+= spl[-1]
    #zs,mean_surfz, cov, std_surfz= calcSurfRdCorrZ(newname,vo=options.fixvc/_REFV0,
    zs,mean_surfz, std_surfz= calcSurfErrZ(newname,vo=options.fixvc/_REFV0,
                                              zh=options.fixzh,
                                  dlnvcdlnr=options.dlnvcdlnr)
    if zs is None: return numpy.zeros((101,4))
    out= numpy.zeros((len(zs),4))
    out[:,0]= zs
    out[:,1]= mean_surfz
    out[:,2]= std_surfz/mean_surfz
    out[:,3]= std_surfz
    return out
Example #2
0
def plotprops(options,args):
    #Go through all of the bins
    if options.sample.lower() == 'g':
        npops= 62
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        npops= 30
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    ndatas= pickle.load(savefile)
    savefile.close()
    for ii in range(npops):
        bovy_plot.bovy_print()
        bovy_plot.bovy_text(r'$[\mathrm{Fe/H}] = %.2f$' % (fehs[ii])
                            +'\n'
                            r'$[\alpha/\mathrm{Fe}] = %.3f$' % (afes[ii])
                            +'\n'
                            r'$N_{\mathrm{data}} = %i$' % (ndatas[ii])
                            +'\n'
                            r'$\ln h_R / 8\,\mathrm{kpc} = %.1f$' % (numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii])/8.)) 
                            +'\n'
                            +r'$\ln \sigma_R / 220\,\mathrm{km\,s}^{-1} = %.1f$' % (numpy.log(monoAbundanceMW.sigmar(fehs[ii],afes[ii])/220.))
                            +'\n'
                            +r'$\ln \sigma_Z / 220\,\mathrm{km\,s}^{-1} = %.1f$' % (numpy.log(monoAbundanceMW.sigmaz(fehs[ii],afes[ii])/220.)),
                            top_left=True,size=16.)
        #Plotname
        spl= options.outfilename.split('.')
        newname= ''
        for jj in range(len(spl)-1):
            newname+= spl[jj]
            if not jj == len(spl)-2: newname+= '.'
        newname+= '_%i.' % ii
        newname+= spl[-1]
        bovy_plot.bovy_end_print(newname)
Example #3
0
def calcAllDerivProps(ii,options,args):
    #Go through all of the bins
    if options.sample.lower() == 'g':
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    savefile.close()
    if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                    k=(options.sample.lower() == 'k')) /8.) > -0.5:
        return None
    if _NOTDONEYET:
        spl= options.restart.split('.')
    else:
        spl= args[0].split('.')
    newname= ''
    for jj in range(len(spl)-1):
        newname+= spl[jj]
        if not jj == len(spl)-2: newname+= '.'
    newname+= '_%i.' % ii
    newname+= spl[-1]
    derivProps= calcDerivProps(newname,vo=options.fixvc/_REFV0,zh=options.fixzh,
                               dlnvcdlnr=options.dlnvcdlnr)
    return derivProps
Example #4
0
def generateHTML(options,args):
    outfile= open(options.outfilename,'w')
    outfile.write('<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">\n')
    outfile.write('<html xmlns="http://www.w3.org/1999/xhtml">\n')
    outfile.write('<head>\n')
    outfile.write('<meta http-equiv="content-type" content="text/html; charset=utf-8" />\n')
    outfile.write('<title>Fit results for %s dwarfs</title>\n' % (options.sample.upper()))
    outfile.write('<meta name="description" content="Fit results for %s dwarfs" />\n' % (options.sample.upper()))
    outfile.write('</head>')
    outfile.write('<body>')
    if options.sample.lower() == 'g':
        npops= 62
    elif options.sample.lower() == 'k':
        npops= 54
    if options.sample.lower() == 'g':
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    npops= len(fehs)
    savefile.close()
    if False:
        types= ['rdfh','rdfhrdvt','rdhr','rdsz',
                'rdpout','rddvt','srsz','pout','dvt',
                'loglhist','props','rdfhrdf','rdfhrdvtrdf']
    if False:
        types= ['rdfh','rdhr','rdhrc','rdsz',
                'rdpout','rdpoutc','fhpoutc','rddvt','srsz','srszc','pout',
                'loglhist','props']
    types= ['rdfh','rdhr','rdhrc','rdsz',
            'hszsz','hszszc','pout',#'hrreal',
            'loglhist','derived','props']
    ntypes= len(types)
    for ii in range(npops):
        if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                        k=(options.sample.lower() == 'k'))/8.) > -0.5:
            continue
        outfile.write('<p style="font-size:xx-large;">%i</p>\n' % ii)
        line= ''
        for jj in range(ntypes):
            line+= '<img src="%s" alt="" width="300" /> ' % (os.path.join(options.figdir,options.basename+'_%s_%i.png' % (types[jj],ii)))
        outfile.write(line+'<br>\n')
        outfile.write('<hr size="3" color="black">\n')
    outfile.write('</body>\n')
    outfile.write('</html>\n')
    outfile.close()
Example #5
0
def calcAllPDFs(ii,options,args):
    #Go through all of the bins
    if options.sample.lower() == 'g':
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    savefile.close()
    if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                    k=(options.sample.lower() == 'k')) /8.) > -0.5 \
                or (options.sample.lower() == 'g' and ii < 6) \
                or (options.sample.lower() == 'k' and ii < 7):
        return numpy.zeros((options.nrds,options.nfhs))
    if _NOTDONEYET:
        spl= options.restart.split('.')
    else:
        spl= args[0].split('.')
    newname= ''
    for jj in range(len(spl)-1):
        newname+= spl[jj]
        if not jj == len(spl)-2: newname+= '.'
    newname+= '_%i.' % ii
    newname+= spl[-1]
    savefile= open(newname,'rb')
    try:
        if not _NOTDONEYET:
            params= pickle.load(savefile)
            mlogl= pickle.load(savefile)
        logl= pickle.load(savefile)
    except:
        return None
    finally:
        savefile.close()
    if _NOTDONEYET:
        logl[(logl == 0.)]= -numpy.finfo(numpy.dtype(numpy.float64)).max
    logl[numpy.isnan(logl)]= -numpy.finfo(numpy.dtype(numpy.float64)).max
    marglogl= numpy.zeros((logl.shape[0],logl.shape[3]))
    for jj in range(marglogl.shape[0]):
        for kk in range(marglogl.shape[1]):
            marglogl[jj,kk]= misc.logsumexp(logl[jj,0,0,kk,:,:,:,0].flatten())
    if marglogl[-1,-1] < -10000000000000.:
        return numpy.zeros((options.nrds,options.nfhs))
    else:
        return marglogl
Example #6
0
def plot1d(options,args):
    """Make a plot of a quantity's best-fit vs. FeH and aFe"""
    if options.sample.lower() == 'g':
        npops= 62
    elif options.sample.lower() == 'k':
        npops= 54
    if options.sample.lower() == 'g':
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    savefile.close()
    #First calculate the derivative properties
    if not options.multi is None:
        derivProps= multi.parallel_map((lambda x: calcAllDerivProps(x,options,args)),
                                  range(npops),
                                  numcores=numpy.amin([options.multi,
                                                       npops,
                                                       multiprocessing.cpu_count()]))
    else:
        derivProps= []
        for ii in range(npops):
            derivProps.append(calcAllDerivProps(ii,options,args))
    #Load into plotthis
    plotthis= numpy.zeros(npops)+numpy.nan
    for ii in range(npops):
        if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                         k=(options.sample.lower() == 'k')) /8.) > -0.5 \
                or (options.sample.lower() == 'g' and ii < 6) \
                or (options.sample.lower() == 'k' and ii < 7):
            continue
        plotthis[ii]= derivProps[ii][options.subtype.lower()]
    #Now plot
    bovy_plot.bovy_print()
    monoAbundanceMW.plotPixelFunc(fehs,afes,plotthis,
                                  zlabel=labels[options.subtype.lower()])
    bovy_plot.bovy_end_print(options.outfilename)
    return None        
Example #7
0
colormap = matplotlib.cm.jet

def _squeeze(o,omin,omax):
    return (o-omin)/(omax-omin)

d = pickle.load(open('01024/g1536.01024.z0agedecomp.dat'))
hz = d['hz']*1000
hzerr = d['hzerr']*1000
rexp = d['rexp'][(d['hzerr'] < 99)]
rexperr = d['rexperr'][(d['hzerr'] < 99)]
mass = d['mass'][(d['hzerr'] < 99)]

#Bovy stuff
bovyhz,bovyhzerr=zip(*[mam.hz(u[0],u[1],err=True) for u in zip(mam.fehs(),mam.afes())])
bovyrexp,bovyrexperr=zip(*[mam.hr(u[0],u[1],err=True) for u in zip(mam.fehs(),mam.afes())])
bovymass=np.array([mam.abundanceDist(u[0],u[1]) for u in zip(mam.fehs(),mam.afes())])

maxhr = 5
maxhz = 2000
bovyplotrexp = np.copy(bovyrexp)
bighr = bovyrexp > maxhr
bovyplotrexp[bighr] = maxhr-0.3

ax = plt.subplot(1,1,1)

ages = [i['mean'] for i in d['age']]
sizes = 10*(d['mass']/4e8)
print sizes
scat = plt.scatter(d['rexp'],hz,c=ages,s=sizes,edgecolors='none')
plt.xlim(1,6.5)
Example #8
0
def plotRdfh(options,args):
    #Go through all of the bins
    if options.sample.lower() == 'g':
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    npops= len(fehs)
    savefile.close()
    for ii in range(npops):
        if _NOTDONEYET:
            spl= options.restart.split('.')
        else:
            spl= args[0].split('.')
        newname= ''
        for jj in range(len(spl)-1):
            newname+= spl[jj]
            if not jj == len(spl)-2: newname+= '.'
        newname+= '_%i.' % ii
        newname+= spl[-1]
        savefile= open(newname,'rb')
        try:
            if not _NOTDONEYET:
                params= pickle.load(savefile)
                mlogl= pickle.load(savefile)
            logl= pickle.load(savefile)
        except:
            continue
        finally:
            savefile.close()
        if _NOTDONEYET:
            logl[(logl == 0.)]= -numpy.finfo(numpy.dtype(numpy.float64)).max
        if options.restrictdvt:
            logl= logl[:,:,:,:,:,:,:,1:4,:,:,:]
        if options.restrictdf:
            hrs= numpy.log(numpy.linspace(1.5,5.,logl.shape[4])/_REFR0)
            srs= numpy.log(numpy.linspace(25.,70.,logl.shape[5])/_REFV0)
            szs= numpy.log(numpy.linspace(15.,60.,logl.shape[6])/_REFV0)
            lnhrin, lnsrin, lnszin= approxFitResult(fehs[ii],afes[ii])
            hrindx= numpy.argmin((hrs-lnhrin)**2.)
            srindx= numpy.argmin((srs-lnsrin)**2.)
            szindx= numpy.argmin((szs-lnszin)**2.)
            minhrindx= hrindx-1
            maxhrindx= hrindx+1
            if minhrindx < 0: 
                minhrindx+= 1
                maxhrindx+= 1
            elif maxhrindx >= logl.shape[4]: 
                minhrindx-= 1
                maxhrindx-= 1
            minsrindx= srindx-1
            maxsrindx= srindx+1
            if minsrindx < 0: 
                minsrindx+= 1
                maxsrindx+= 1
            elif maxsrindx >= logl.shape[5]: 
                minsrindx-= 1
                maxsrindx-= 1
            minszindx= szindx-1
            maxszindx= szindx+1
            if minszindx < 0: 
                minszindx+= 1
                maxszindx+= 1
            elif maxszindx >= logl.shape[6]: 
                minszindx-= 1
                maxszindx-= 1
            logl= logl[:,:,:,:,minhrindx:maxhrindx+1,minsrindx:maxsrindx+1,
                               minszindx:maxszindx+1,:,:,:,:]
        marglogl= numpy.zeros((logl.shape[0],logl.shape[3]))
        marglogldvt0= numpy.zeros((logl.shape[0],logl.shape[3]))
        condfh= numpy.zeros((logl.shape[3]))
        condlogp= numpy.zeros(logl.shape[0])
        condfhdvt0= numpy.zeros((logl.shape[3]))
        condlogpdvt0= numpy.zeros(logl.shape[0])
        if ii == 0:
            allmarglogl= numpy.zeros((logl.shape[0],logl.shape[3],npops))
        for jj in range(marglogl.shape[0]):
            for kk in range(marglogl.shape[1]):
                indx= True-numpy.isnan(logl[jj,0,0,kk,:,:,:,:,:,:,:].flatten())
                indxdvt0= True-numpy.isnan(logl[jj,0,0,kk,:,:,:,2,:,:,:].flatten())
                if numpy.sum(indx) > 0:
                    marglogl[jj,kk]= misc.logsumexp(logl[jj,0,0,kk,:,:,:,:,:,:,:].flatten()[indx])
                else:
                    marglogl[jj,kk]= -numpy.finfo(numpy.dtype(numpy.float64)).max
                if numpy.sum(indxdvt0) > 0:
                    marglogldvt0[jj,kk]= misc.logsumexp(logl[jj,0,0,kk,:,:,:,2,:,:,:].flatten()[indxdvt0])
                else:
                    marglogldvt0[jj,kk]= -numpy.finfo(numpy.dtype(numpy.float64)).max
            condlogp[jj]= misc.logsumexp(marglogl[jj,:])
            condlogl= marglogl[jj,:]-misc.logsumexp(marglogl[jj,:])
            condfh[jj]= numpy.sum(numpy.exp(condlogl)*numpy.linspace(0.,1.,logl.shape[3]))/numpy.sum(numpy.exp(condlogl))
            condlogpdvt0[jj]= misc.logsumexp(marglogldvt0[jj,:])
            condlogldvt0= marglogldvt0[jj,:]-misc.logsumexp(marglogldvt0[jj,:])
            condfhdvt0[jj]= numpy.sum(numpy.exp(condlogldvt0)*numpy.linspace(0.,1.,logl.shape[3]))/numpy.sum(numpy.exp(condlogldvt0))
        if monoAbundanceMW.hr(fehs[ii],afes[ii]) < 3.5 \
                and numpy.amax(logl) < 0.: #latter removes ridiculous bins
            allmarglogl[:,:,ii]= marglogl
        #Normalize
        alogl= marglogl-numpy.amax(marglogl)
        bovy_plot.bovy_print()
        bovy_plot.bovy_dens2d(numpy.exp(alogl).T,
                              origin='lower',cmap='gist_yarg',
                              interpolation='nearest',
                              xrange=[1.5,4.5],yrange=[0.,1.],
                              xlabel=r'$R_d$',ylabel=r'$f_h$')
        s= 2.*condlogp
        s-= numpy.amax(s)
        s+= 16.
        s*= 3.
        bovy_plot.bovy_plot(numpy.linspace(1.5,4.5,logl.shape[0]),
                            condfh,color='0.75',ls='-',
                            overplot=True,zorder=2)
        bovy_plot.bovy_plot(numpy.linspace(1.5,4.5,logl.shape[0]),
                            condfh,color='0.75',marker='o',
                            s=s,scatter=True,overplot=True,zorder=10)
        maxindx= numpy.argmax(s)
        bovy_plot.bovy_plot(numpy.linspace(1.5,4.5,logl.shape[0])[maxindx],
                            condfh[maxindx],color='blue',marker='o',
                            ls='none',
                            ms=8.,mec='none',
                            overplot=True,zorder=13)
        #dvt0
        s= 2.*condlogpdvt0
        s-= numpy.amax(s)
        s+= 16.
        s*= 3.
        if not options.restrictdvt:
            bovy_plot.bovy_plot(numpy.linspace(1.5,4.5,logl.shape[0]),
                                condfhdvt0,color='0.25',ls='-',
                                overplot=True,zorder=1)
            bovy_plot.bovy_plot(numpy.linspace(1.5,4.5,logl.shape[0]),
                                condfhdvt0,color='0.25',marker='o',
                                s=s,scatter=True,overplot=True,zorder=11)
            maxindx= numpy.argmax(s)
            bovy_plot.bovy_plot(numpy.linspace(1.5,4.5,logl.shape[0])[maxindx],
                                condfhdvt0[maxindx],color='red',marker='o',
                                ls='none',
                                ms=8.,mec='none',
                                overplot=True,zorder=12)
        #Plotname
        spl= options.outfilename.split('.')
        newname= ''
        for jj in range(len(spl)-1):
            newname+= spl[jj]
            if not jj == len(spl)-2: newname+= '.'
        newname+= '_%i.' % ii
        newname+= spl[-1]
        if options.restrictdf and not options.restrictdvt:
            bovy_plot.bovy_text(r'$\mathrm{Restricted\ DF\ parameters}$',
                                top_right=True,size=14.)
        elif options.restrictdvt and not options.restrictdf:
            bovy_plot.bovy_text(r'$\mathrm{Restricted}\ \Delta \bar{V}_T\ \mathrm{range}$',
                                top_right=True,size=14.)
        elif options.restrictdvt and options.restrictdf:
            bovy_plot.bovy_text(r'$\mathrm{Restricted\ DF\ parameters}$'
                                +'\n'
                                +r'$\mathrm{Restricted}\ \Delta \bar{V}_T\ \mathrm{range}$',
                                top_right=True,size=14.)
        bovy_plot.bovy_end_print(newname)
    #Now plot combined
    alogl= numpy.sum(allmarglogl,axis=2)\
        -numpy.amax(numpy.sum(allmarglogl,axis=2))
    bovy_plot.bovy_print()
    bovy_plot.bovy_dens2d(numpy.exp(alogl).T,
                              origin='lower',cmap='gist_yarg',
                              interpolation='nearest',
                              xrange=[1.5,4.5],yrange=[0.,1.],
                              xlabel=r'$R_d$',ylabel=r'$f_h$')
    bovy_plot.bovy_end_print(options.outfilename)
Example #9
0
def plot2d(options,args):
    """Make a plot of a quantity's best-fit vs. FeH and aFe"""
    if options.sample.lower() == 'g':
        npops= 62
    elif options.sample.lower() == 'k':
        npops= 54
    if options.sample.lower() == 'g':
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    savefile.close()
    #First calculate the derivative properties
    if not options.multi is None:
        derivProps= multi.parallel_map((lambda x: calcAllDerivProps(x,options,args)),
                                  range(npops),
                                  numcores=numpy.amin([options.multi,
                                                       npops,
                                                       multiprocessing.cpu_count()]))
    else:
        derivProps= []
        for ii in range(npops):
            derivProps.append(calcAllDerivProps(ii,options,args))
    xprop= options.subtype.split(',')[0]
    yprop= options.subtype.split(',')[1]
    if xprop == 'fracfaint' or yprop == 'fracfaint':
        #Read the data
        print "Reading the data ..."
        raw= read_rawdata(options)
        #Bin the data
        binned= pixelAfeFeh(raw,dfeh=0.1,dafe=0.05)
        for ii in range(npops):
            if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                            k=(options.sample.lower() == 'k')) /8.) > -0.5 \
                                            or (options.sample.lower() == 'g' and (ii == 50 or ii == 57)) \
                                            or (options.sample.lower() == 'k' and ii < 7):
                                            continue
            data= binned(fehs[ii],afes[ii])
            indx= (data.dered_r > 17.8)
            derivProps[ii]['fracfaint']= numpy.sum(indx)/float(len(indx))
            derivProps[ii]['fracfaint_err']= 0.
    if xprop == 'nfaint' or yprop == 'nfaint':
        #Read the data
        print "Reading the data ..."
        raw= read_rawdata(options)
        #Bin the data
        binned= pixelAfeFeh(raw,dfeh=0.1,dafe=0.05)
        for ii in range(npops):
            if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                            k=(options.sample.lower() == 'k')) /8.) > -0.5 \
                                            or (options.sample.lower() == 'g' and ii < 6) \
                                            or (options.sample.lower() == 'k' and ii < 7):
                                            continue
            data= binned(fehs[ii],afes[ii])
            indx= (data.dered_r > 17.8)
            derivProps[ii]['nfaint']= numpy.sum(indx)
            derivProps[ii]['nfaint_err']= 0.
    if xprop == 'hz' or yprop == 'hz':
        for ii in range(npops):
            if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                            k=(options.sample.lower() == 'k')) /8.) > -0.5 \
                                            or (options.sample.lower() == 'g' and ii < 6) \
                                            or (options.sample.lower() == 'k' and ii < 7):
                                            continue
            hz, hzerr= monoAbundanceMW.hz(fehs[ii],afes[ii],
                                          k=(options.sample.lower() == 'k'),
                                          err=True)
            derivProps[ii]['hz']= hz
            derivProps[ii]['hz_err']= hzerr    
    if xprop == 'hr' or yprop == 'hr':
        for ii in range(npops):
            if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                            k=(options.sample.lower() == 'k')) /8.) > -0.5 \
                                            or (options.sample.lower() == 'g' and ii < 6) \
                                            or (options.sample.lower() == 'k' and ii < 7):
                                            continue
            hr, hrerr= monoAbundanceMW.hr(fehs[ii],afes[ii],
                                          k=(options.sample.lower() == 'k'),
                                          err=True)
            derivProps[ii]['hr']= hr
            derivProps[ii]['hr_err']= hrerr    
    #Load into plotthis
    plotthis_x= numpy.zeros(npops)+numpy.nan
    plotthis_y= numpy.zeros(npops)+numpy.nan
    plotthis_x_err= numpy.zeros(npops)+numpy.nan
    plotthis_y_err= numpy.zeros(npops)+numpy.nan
    for ii in range(npops):
        if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                         k=(options.sample.lower() == 'k')) /8.) > -0.5 \
                or (options.sample.lower() == 'g' and ii < 6) \
                or (options.sample.lower() == 'k' and ii < 7):
            continue
        plotthis_x[ii]= derivProps[ii][xprop]
        plotthis_y[ii]= derivProps[ii][yprop]
        plotthis_x_err[ii]= derivProps[ii][xprop+'_err']
        plotthis_y_err[ii]= derivProps[ii][yprop+'_err']
    #Now plot
    bovy_plot.bovy_print(fig_width=6.)
    bovy_plot.bovy_plot(plotthis_x,plotthis_y,
                        s=25.,c=afes,
                        cmap='jet',
                        xlabel=labels[xprop],ylabel=labels[yprop],
                        clabel=r'$[\alpha/\mathrm{Fe}]$',
                        xrange=ranges[xprop],yrange=ranges[yprop],
                        vmin=0.,vmax=0.5,
                        scatter=True,edgecolors='none',
                        colorbar=True)
    colormap = cm.jet
    for ii in range(npops):
        if numpy.isnan(plotthis_x[ii]): continue
        pyplot.errorbar(plotthis_x[ii],
                        plotthis_y[ii],
                        xerr=plotthis_x_err[ii],
                        yerr=plotthis_y_err[ii],
                        color=colormap(_squeeze(afes[ii],
                                                numpy.amax([numpy.amin(afes)]),
                                                            numpy.amin([numpy.amax(afes)]))),
                        elinewidth=1.,capsize=3,zorder=0)  
    bovy_plot.bovy_end_print(options.outfilename)
    return None        
Example #10
0
def plotbestz(options,args):
    """Make a plot of a quantity's best-fit vs. FeH and aFe"""
    if options.sample.lower() == 'g':
        npops= 62
    elif options.sample.lower() == 'k':
        npops= 54
    if options.sample.lower() == 'g':
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    savefile.close()
    #First calculate the derivative properties
    if not options.multi is None:
        derivProps= multi.parallel_map((lambda x: calcAllSurfErrZ(x,options,args)),
                                  range(npops),
                                  numcores=numpy.amin([options.multi,
                                                       npops,
                                                       multiprocessing.cpu_count()]))
    else:
        derivProps= []
        for ii in range(npops):
            derivProps.append(calcAllSurfErrZ(ii,options,args))
    #Load into plotthis
    plotthis= numpy.zeros(npops)+numpy.nan
    plotthis_y= numpy.zeros(npops)+numpy.nan
    plotthis_y_err= numpy.zeros(npops)+numpy.nan
    for ii in range(npops):
        if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                         k=(options.sample.lower() == 'k')) /8.) > -0.5 \
                or (options.sample.lower() == 'g' and ii < 6) \
                or (options.sample.lower() == 'k' and ii < 7):
            continue
        #Determine best-r
        #indx= numpy.argmin(derivProps[ii][:,2]/numpy.fabs(derivProps[ii][:,1]))
        indx= numpy.argmin(numpy.fabs(derivProps[ii][:,2]))
        plotthis[ii]= derivProps[ii][indx,0]
        plotthis_y[ii]= derivProps[ii][indx,1]
        plotthis_y_err[ii]= derivProps[ii][indx,3]
    #Now plot
    bovy_plot.bovy_print()
    print plotthis, plotthis_y
    bovy_plot.bovy_plot(plotthis,plotthis_y,'ko',
                        xlabel=r'$Z\ (\mathrm{kpc})$',
                        ylabel=r'$\Sigma(R_0,|Z|)\ (M_\odot\,\mathrm{pc}^{-2})$',
                        xrange=[0.,5.],
                        yrange=[10.,1050.],#,numpy.nanmin(plotthis_y)-10.,
#                                numpy.nanmax(plotthis_y)+10.],
                        semilogy=True)
    pyplot.errorbar(plotthis,
                    plotthis_y,
                    yerr=plotthis_y_err,
                    elinewidth=1.,capsize=3,zorder=0,
                    color='k',linestyle='none')  
    #trs= numpy.linspace(4.3,9.,1001)
    #pyplot.plot(trs,72.*numpy.exp(-(trs-8.)/3.),'k--')
    #pyplot.plot(trs,72.*numpy.exp(-(trs-8.)/2.),'k-.')
    #pyplot.plot(trs,72.*numpy.exp(-(trs-8.)/4.),'k:')
    bovy_plot.bovy_end_print(options.outfilename.replace('.png','_zvssurf.png'))
    return None        
Example #11
0
def plotbestr(options,args):
    """Make a plot of a quantity's best-fit vs. FeH and aFe"""
    if options.sample.lower() == 'g':
        npops= 62
    elif options.sample.lower() == 'k':
        npops= 54
    if options.sample.lower() == 'g':
        savefile= open('binmapping_g.sav','rb')
    elif options.sample.lower() == 'k':
        savefile= open('binmapping_k.sav','rb')
    fehs= pickle.load(savefile)
    afes= pickle.load(savefile)
    savefile.close()
    #First calculate the derivative properties
    if not options.multi is None:
        derivProps= multi.parallel_map((lambda x: calcAllSurfErr(x,options,args)),
                                  range(npops),
                                  numcores=numpy.amin([options.multi,
                                                       npops,
                                                       multiprocessing.cpu_count()]))
    else:
        derivProps= []
        for ii in range(npops):
            derivProps.append(calcAllSurfErr(ii,options,args))
    #If a second argument is given, this gives a set of rs at which also to calculate the surface density
    if len(args) > 1:
        if os.path.exists(args[1]):
            surffile= open(args[1],'rb')
            altsurfrs= pickle.load(surffile)
            surffile.close()
            calcExtra= True
        else:
            raise IOError("extra savefilename with surface-densities has to exist when it is specified")
    else:
        calcExtra= False
    if not calcExtra: #Fiducial, for which we also calculate everything at the mean radius of each MAP
        #Load g orbits
        orbitsfile= 'gOrbitsNew.sav'
        savefile= open(orbitsfile,'rb')
        orbits= pickle.load(savefile)
        savefile.close()
        #Cut to S/N, logg, and EBV
        indx= (orbits.sna > 15.)*(orbits.logga > 4.2)*(orbits.ebv < 0.3)
        orbits= orbits[indx]
        #Load the orbits into the pixel structure
        pix= pixelAfeFeh(orbits,dfeh=0.1,dafe=0.05)
        #Now calculate meanr
        rmean= numpy.zeros(npops)
        for ii in range(npops):
            data= pix(fehs[ii],afes[ii])
            vals= data.densrmean*8.
            if False:#True:
                rmean[ii]= numpy.mean(vals)
            else:
                rmean[ii]= numpy.median(vals)
    #Load into plotthis
    plotthis= numpy.zeros(npops)+numpy.nan
    plotthis_y= numpy.zeros(npops)+numpy.nan
    plotthis_y_err= numpy.zeros(npops)+numpy.nan
    plotthiskz_y= numpy.zeros(npops)+numpy.nan
    plotthiskz_y_err= numpy.zeros(npops)+numpy.nan
    altplotthis= numpy.zeros(npops)+numpy.nan
    altplotthis_y= numpy.zeros(npops)+numpy.nan
    altplotthis_y_err= numpy.zeros(npops)+numpy.nan
    altplotthiskz_y= numpy.zeros(npops)+numpy.nan
    altplotthiskz_y_err= numpy.zeros(npops)+numpy.nan
    for ii in range(npops):
        if numpy.log(monoAbundanceMW.hr(fehs[ii],afes[ii],
                                         k=(options.sample.lower() == 'k')) /8.) > -0.5 \
                or (options.sample.lower() == 'g' and (ii < 0 or ii == 50)) \
                or (options.sample.lower() == 'k' and ii < 7):
            continue
        #Determine best-r
        #indx= numpy.argmin(derivProps[ii][:,2]/numpy.fabs(derivProps[ii][:,1]))
        indx= numpy.argmin(numpy.fabs(derivProps[ii][:,2]))
        if indx == 0: indx= int(numpy.floor(numpy.random.uniform()*10))
        plotthis[ii]= derivProps[ii][indx,0]
        plotthis_y[ii]= derivProps[ii][indx,1]
        plotthis_y_err[ii]= derivProps[ii][indx,3]
        plotthiskz_y[ii]= derivProps[ii][indx,4]
        plotthiskz_y_err[ii]= derivProps[ii][indx,5]
        if calcExtra:
            indx= numpy.argmin(numpy.fabs(derivProps[ii][:,0]-altsurfrs[ii]))
            altplotthis[ii]= derivProps[ii][indx,0]
            altplotthis_y[ii]= derivProps[ii][indx,1]
            altplotthis_y_err[ii]= derivProps[ii][indx,3]           
            altplotthiskz_y[ii]= derivProps[ii][indx,4]
            altplotthiskz_y_err[ii]= derivProps[ii][indx,5]           
        else:
            indx= numpy.argmin(numpy.fabs(derivProps[ii][:,0]-rmean[ii]))
            altplotthis[ii]= derivProps[ii][indx,0]
            altplotthis_y[ii]= derivProps[ii][indx,1]
            altplotthis_y_err[ii]= derivProps[ii][indx,3]           
            altplotthiskz_y[ii]= derivProps[ii][indx,4]
            altplotthiskz_y_err[ii]= derivProps[ii][indx,5]           
    #Now plot
    bovy_plot.bovy_print()
    monoAbundanceMW.plotPixelFunc(fehs,afes,plotthis,
                                  zlabel=r'$R_\Sigma\ (\mathrm{kpc})$')
    bovy_plot.bovy_end_print(options.outfilename)
    bovy_plot.bovy_print()
    print plotthis, plotthis_y
    bovy_plot.bovy_plot(plotthis,plotthis_y,'ko',
                        xlabel=r'$R\ (\mathrm{kpc})$',
                        ylabel=r'$\Sigma(R,|Z| \leq 1.1\,\mathrm{kpc})\ (M_\odot\,\mathrm{pc}^{-2})$',
                        xrange=[4.,10.],
                        yrange=[10,1050.],#,numpy.nanmin(plotthis_y)-10.,
#                                numpy.nanmax(plotthis_y)+10.],
                        semilogy=True)
    pyplot.errorbar(plotthis,
                    plotthis_y,
                    yerr=plotthis_y_err,
                    elinewidth=1.,capsize=3,zorder=0,
                    color='k',linestyle='none')  
    trs= numpy.linspace(4.3,9.,1001)
    pyplot.plot(trs,72.*numpy.exp(-(trs-8.)/3.),'k--')
    pyplot.plot(trs,72.*numpy.exp(-(trs-8.)/2.),'k-.')
    pyplot.plot(trs,72.*numpy.exp(-(trs-8.)/4.),'k:')
    #Fit exponential
    #indx= (plotthis < 8.)
    #plotthis= plotthis[indx]
    #plotthis_y= plotthis_y[indx]
    #plotthis_y_err= plotthis_y_err[indx]
    exp_params= optimize.fmin_powell(expcurve,
                                     numpy.log(numpy.array([72.,2.5])),
                                     args=(plotthis,plotthis_y,plotthis_y_err))
    pyplot.plot(trs,numpy.exp(exp_params[0]-(trs-8.)/numpy.exp(exp_params[1])),
                'k-',lw=2.)
    print numpy.exp(exp_params) 
    bovy_plot.bovy_end_print(options.outfilename.replace('.png','_rvssurf.png'))
    #Save
    if calcExtra:
        save_pickles(options.outfilename.replace('.png','_rvssurf.sav'),
                     plotthis,plotthis_y,plotthis_y_err,
                     plotthiskz_y,plotthiskz_y_err,
                     altplotthis,altplotthis_y,altplotthis_y_err,
                     altplotthiskz_y,altplotthiskz_y_err)
    else:
        save_pickles(options.outfilename.replace('.png','_rvssurf.sav'),
                     plotthis,plotthis_y,plotthis_y_err,
                     plotthiskz_y,plotthiskz_y_err,
                     altplotthis,altplotthis_y,altplotthis_y_err,
                     altplotthiskz_y,altplotthiskz_y_err)
    return None        
Example #12
0
def plot_DFsingles(options,args):
    raw= read_rawdata(options)
    #Bin the data
    binned= pixelAfeFeh(raw,dfeh=options.dfeh,dafe=options.dafe)
    if options.tighten:
        tightbinned= pixelAfeFeh(raw,dfeh=options.dfeh,dafe=options.dafe,
                                 fehmin=-1.6,fehmax=0.5,afemin=-0.05,
                                 afemax=0.55)
    else:
        tightbinned= binned
    #Map the bins with ndata > minndata in 1D
    fehs, afes= [], []
    counter= 0
    abindx= numpy.zeros((len(binned.fehedges)-1,len(binned.afeedges)-1),
                        dtype='int')
    for ii in range(len(binned.fehedges)-1):
        for jj in range(len(binned.afeedges)-1):
            data= binned(binned.feh(ii),binned.afe(jj))
            if len(data) < options.minndata:
                continue
            #print binned.feh(ii), binned.afe(jj), len(data)
            fehs.append(binned.feh(ii))
            afes.append(binned.afe(jj))
            abindx[ii,jj]= counter
            counter+= 1
    nabundancebins= len(fehs)
    fehs= numpy.array(fehs)
    afes= numpy.array(afes)
    #Load each solutions
    sols= []
    savename= args[0]
    initname= options.init
    for ii in range(nabundancebins):
        spl= savename.split('.')
        newname= ''
        for jj in range(len(spl)-1):
            newname+= spl[jj]
            if not jj == len(spl)-2: newname+= '.'
        newname+= '_%i.' % ii
        newname+= spl[-1]
        savefilename= newname
        #Read savefile
        try:
            savefile= open(savefilename,'rb')
        except IOError:
            print "WARNING: MISSING ABUNDANCE BIN"
            sols.append(None)
        else:
            sols.append(pickle.load(savefile))
            savefile.close()
        #Load samples as well
        if options.mcsample:
            #Do the same for init
            spl= initname.split('.')
            newname= ''
            for jj in range(len(spl)-1):
                newname+= spl[jj]
                if not jj == len(spl)-2: newname+= '.'
            newname+= '_%i.' % ii
            newname+= spl[-1]
            options.init= newname
    mapfehs= monoAbundanceMW.fehs()
    mapafes= monoAbundanceMW.afes()
    #Now plot
    #Run through the pixels and gather
    if options.type.lower() == 'afe' or options.type.lower() == 'feh' \
            or options.type.lower() == 'fehafe' \
            or options.type.lower() == 'afefeh':
        plotthis= []
        errors= []
    else:
        plotthis= numpy.zeros((tightbinned.npixfeh(),tightbinned.npixafe()))
    for ii in range(tightbinned.npixfeh()):
        for jj in range(tightbinned.npixafe()):
            data= binned(tightbinned.feh(ii),tightbinned.afe(jj))
            if len(data) < options.minndata:
                if options.type.lower() == 'afe' or options.type.lower() == 'feh' or options.type.lower() == 'fehafe' \
                        or options.type.lower() == 'afefeh':
                    continue
                else:
                    plotthis[ii,jj]= numpy.nan
                    continue
            #Find abundance indx
            fehindx= binned.fehindx(tightbinned.feh(ii))#Map onto regular binning
            afeindx= binned.afeindx(tightbinned.afe(jj))
            solindx= abindx[fehindx,afeindx]
            monoabindx= numpy.argmin((tightbinned.feh(ii)-mapfehs)**2./0.01 \
                                         +(tightbinned.afe(jj)-mapafes)**2./0.0025)
            if sols[solindx] is None:
                if options.type.lower() == 'afe' or options.type.lower() == 'feh' or options.type.lower() == 'fehafe' \
                        or options.type.lower() == 'afefeh':
                    continue
                else:
                    plotthis[ii,jj]= numpy.nan
                    continue
            if options.type.lower() == 'q':
                s= get_potparams(sols[solindx],options,1)
                plotthis[ii,jj]= s[0]
                if not options.flatten is None:
                    plotthis[ii,jj]/= options.flatten
            elif options.type.lower() == 'vc':
                if options.fixvo:
                    plotthis[ii,jj]= 1.
                else:
                    s= get_potparams(sols[solindx],options,1)
                    plotthis[ii,jj]= s[1]
            elif options.type.lower() == 'rd':
                s= get_potparams(sols[solindx],options,1)
                plotthis[ii,jj]= numpy.exp(s[0])
            elif options.type.lower() == 'zh':
                s= get_potparams(sols[solindx],options,1)
                plotthis[ii,jj]= numpy.exp(s[2-(1-(options.fixvo is None))])
            elif options.type.lower() == 'ndata':
                plotthis[ii,jj]= len(data)
            elif options.type.lower() == 'hr':
                s= get_dfparams(sols[solindx],0,options)
                plotthis[ii,jj]= s[0]*_REFR0
                if options.relative:
                    thishr= monoAbundanceMW.hr(mapfehs[monoabindx],mapafes[monoabindx])
                    plotthis[ii,jj]/= thishr
            elif options.type.lower() == 'sz':
                s= get_dfparams(sols[solindx],0,options)
                plotthis[ii,jj]= s[2]*_REFV0
                if options.relative:
                    thissz= monoAbundanceMW.sigmaz(mapfehs[monoabindx],mapafes[monoabindx])
                    plotthis[ii,jj]/= thissz
            elif options.type.lower() == 'sr':
                s= get_dfparams(sols[solindx],0,options)
                plotthis[ii,jj]= s[1]*_REFV0
                if options.relative:
                    thissr= monoAbundanceMW.sigmaz(mapfehs[monoabindx],mapafes[monoabindx])*2.
                    plotthis[ii,jj]/= thissr
            elif options.type.lower() == 'srsz':
                #Setup everything
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                aA= setup_aA(pot,options)               
                dfparams= get_dfparams(sols[solindx],0,options,log=False)
                if options.dfmodel.lower() == 'qdf':
                    #Normalize
                    hr= dfparams[0]/ro
                    sr= dfparams[1]/vo
                    sz= dfparams[2]/vo
                    hsr= dfparams[3]/ro
                    hsz= dfparams[4]/ro
                    #Setup
                    qdf= quasiisothermaldf(hr,sr,sz,hsr,hsz,pot=pot,
                                           aA=aA,cutcounter=True)              
                plotthis[ii,jj]= numpy.sqrt(qdf.sigmaR2(1.,1./_REFR0/ro,
                                                        ngl=options.ngl,gl=True)\
                                                /qdf.sigmaz2(1.,1./_REFR0/ro,
                                                            ngl=options.ngl,gl=True))
            elif options.type.lower() == 'outfrac':
                s= get_dfparams(sols[solindx],0,options)
                plotthis[ii,jj]= s[5]
            elif options.type.lower() == 'rhodm':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                if 'mwpotential' in options.potential.lower():
                    plotthis[ii,jj]= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                elif options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                    plotthis[ii,jj]= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                elif options.potential.lower() == 'mpdiskflplhalofixplfixbulgeflat':
                    plotthis[ii,jj]= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
            elif options.type.lower() == 'rhoo':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                plotthis[ii,jj]= potential.evaluateDensities(1.,0.,pot)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
            elif options.type.lower() == 'surfz':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                plotthis[ii,jj]= 2.*integrate.quad((lambda zz: potential.evaluateDensities(1.,zz,pot)),0.,options.height/_REFR0/ro)[0]*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*_REFR0*ro
            elif options.type.lower() == 'surfzdisk':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                if 'mpdisk' in options.potential.lower() or 'mwpotential' in options.potential.lower():
                    plotthis[ii,jj]= 2.*integrate.quad((lambda zz: potential.evaluateDensities(1.,zz,pot[0])),0.,options.height/_REFR0/ro)[0]*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*_REFR0*ro
            elif options.type.lower() == 'kz':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                plotthis[ii,jj]= numpy.fabs(potential.evaluatezforces(1.,options.height/ro/_REFR0,pot)/2./numpy.pi/4.302*_REFV0**2.*vo**2./_REFR0/ro)
            elif options.type.lower() == 'plhalo':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                if options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                    plotthis[ii,jj]= pot[1].alpha
            elif options.type.lower() == 'qhalo':
                #Setup potential
                s= get_potparams(sols[solindx],options,1)
                if options.potential.lower() == 'mpdiskflplhalofixplfixbulgeflat':
                    plotthis[ii,jj]= s[4]
            elif options.type.lower() == 'dlnvcdlnr':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                plotthis[ii,jj]= potential.dvcircdR(pot,1.)
            elif options.type.lower() == 'fd':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                if 'mwpotential' in options.potential.lower():
                    plotthis[ii,jj]= (pot[0].vcirc(1.))**2.
            elif options.type.lower() == 'fh':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                if 'mwpotential' in options.potential.lower():
                    plotthis[ii,jj]= (pot[1].vcirc(1.))**2.
            elif options.type.lower() == 'fb':
                #Setup potential
                pot= setup_potential(sols[solindx],options,1)
                vo= get_vo(sols[solindx],options,1)
                ro= get_ro(sols[solindx],options)
                if 'mwpotential' in options.potential.lower():
                    plotthis[ii,jj]= (pot[2].vcirc(1.))**2.
            elif options.type.lower() == 'afe' or options.type.lower() == 'feh' or options.type.lower() == 'fehafe' \
                    or options.type.lower() == 'afefeh':
                thisplot=[tightbinned.feh(ii),
                          tightbinned.afe(jj),
                          len(data)]
                if options.subtype.lower() == 'qvc':
                    s= get_potparams(sols[solindx],options,1)
                    thisq= s[0]
                    if not options.flatten is None:
                        thisq/= options.flatten
                    thisvc= s[1]
                    thisplot.extend([thisq,thisvc])
                elif options.subtype.lower() == 'rdzh':
                    s= get_potparams(sols[solindx],options,1)
                    thisrd= numpy.exp(s[0])
                    thiszh= numpy.exp(s[2-(1-(options.fixvo is None))])
                    thisplot.extend([thisrd,thiszh])
                elif options.subtype.lower() == 'zhvc':
                    s= get_potparams(sols[solindx],options,1)
                    thiszh= numpy.exp(s[2-(1-(options.fixvo is None))])
                    thisvc= s[1]*_REFV0
                    thisplot.extend([thiszh,thisvc])
                elif options.subtype.lower() == 'dlnvcdlnrvc':
                    s= get_potparams(sols[solindx],options,1)
                    thisslope= s[3-(1-(options.fixvo is None))]/30.
                    thisvc= s[1]*_REFV0
                    thisplot.extend([thisslope,thisvc])
                elif options.subtype.lower() == 'rdvc':
                    s= get_potparams(sols[solindx],options,1)
                    thisrd= numpy.exp(s[0])
                    thisvc= s[1]*_REFV0
                    thisplot.extend([thisrd,thisvc])
                elif options.subtype.lower() == 'rdplhalo':
                    s= get_potparams(sols[solindx],options,1)
                    thisrd= numpy.exp(s[0])
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    if options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisplhalo= pot[1].alpha
                    thisplot.extend([thisrd,thisplhalo])
                elif options.subtype.lower() == 'dlnvcdlnrplhalo':
                    s= get_potparams(sols[solindx],options,1)
                    thisslope= s[3-(1-(options.fixvo is None))]/30.
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    if options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisplhalo= pot[1].alpha
                    thisplot.extend([thisslope,thisplhalo])
                elif options.subtype.lower() == 'dlnvcdlnrzh':
                    s= get_potparams(sols[solindx],options,1)
                    thisslope= s[3-(1-(options.fixvo is None))]/30.
                    thiszh= numpy.exp(s[2-(1-(options.fixvo is None))])
                    thisplot.extend([thisslope,thiszh])
                elif options.subtype.lower() == 'vc14plhalo':
                    s= get_potparams(sols[solindx],options,1)
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    if options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisplhalo= pot[1].alpha
                    thisvc14= potential.vcirc(pot,14./_REFR0/ro)*_REFV0*vo
                    thisplot.extend([thisplhalo,thisvc14])
                elif options.subtype.lower() == 'plhalovc':
                    s= get_potparams(sols[solindx],options,1)
                    thisvc= s[1]*_REFV0
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    if options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisplhalo= pot[1].alpha
                    thisplot.extend([thisplhalo,thisvc])
                elif options.subtype.lower() == 'zhplhalo':
                    s= get_potparams(sols[solindx],options,1)
                    thiszh= numpy.exp(s[2-(1-(options.fixvo is None))])
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    if options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisplhalo= pot[1].alpha
                    thisplot.extend([thiszh,thisplhalo])
                elif options.subtype.lower() == 'rhodmzh':
                    s= get_potparams(sols[solindx],options,1)
                    thisrd= numpy.exp(s[0])
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    thiszh= numpy.exp(s[2-(1-(options.fixvo is None))])
                    if 'mwpotential' in options.potential.lower():
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    elif options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    thisplot.extend([thisrhodm,thiszh])
                elif options.subtype.lower() == 'rhodmsurfz':
                    s= get_potparams(sols[solindx],options,1)
                    thisrd= numpy.exp(s[0])
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    thissurfz= 2.*integrate.quad((lambda zz: potential.evaluateDensities(1.,zz,pot)),0.,options.height/_REFR0/ro)[0]*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*_REFR0*ro
                    if 'mwpotential' in options.potential.lower():
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    elif options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    thisplot.extend([thisrhodm,thissurfz])
                elif options.subtype.lower() == 'surfzzh':
                    s= get_potparams(sols[solindx],options,1)
                    thisrd= numpy.exp(s[0])
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    thiszh= numpy.exp(s[2-(1-(options.fixvo is None))])
                    thissurfz= 2.*integrate.quad((lambda zz: potential.evaluateDensities(1.,zz,pot)),0.,options.height/_REFR0/ro)[0]*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*_REFR0*ro
                    thisplot.extend([thissurfz,thiszh])
                elif options.subtype.lower() == 'rhoozh':
                    s= get_potparams(sols[solindx],options,1)
                    thisrd= numpy.exp(s[0])
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    thiszh= numpy.exp(s[2-(1-(options.fixvo is None))])
                    thisrhoo= potential.evaluateDensities(1.,0.,pot)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    thisplot.extend([thisrhoo,thiszh])
                elif options.subtype.lower() == 'rhodmvc':
                    s= get_potparams(sols[solindx],options,1)
                    thisvc= s[1]*_REFV0
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    if 'mwpotential' in options.potential.lower():
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    elif options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    thisplot.extend([thisrhodm,thisvc])
                elif options.subtype.lower() == 'rhodmrd':
                    s= get_potparams(sols[solindx],options,1)
                    thisrd= numpy.exp(s[0])
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    thisrdh= numpy.exp(s[0])
                    if 'mwpotential' in options.potential.lower():
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    elif options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    thisplot.extend([thisrhodm,thisrd])
                elif options.subtype.lower() == 'rhodmplhalo':
                    s= get_potparams(sols[solindx],options,1)
                    thisrd= numpy.exp(s[0])
                    #Setup potential
                    pot= setup_potential(sols[solindx],options,1)
                    vo= get_vo(sols[solindx],options,1)
                    ro= get_ro(sols[solindx],options)
                    if options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisplhalo= pot[1].alpha
                    if 'mwpotential' in options.potential.lower():
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    elif options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                        thisrhodm= pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
                    thisplot.extend([thisrhodm,thisplhalo])
                plotthis.append(thisplot)
    #Set up plot
    if options.type.lower() == 'q':
        if not options.flatten is None:
            vmin, vmax= 0.9, 1.1
            zlabel=r'$\mathrm{flattening}\ q / %.1f$' % options.flatten
        elif 'real' in options.outfilename.lower():
            vmin, vmax= 0.9, 1.1
            medianq= numpy.median(plotthis[numpy.isfinite(plotthis)])
            plotthis/= medianq
            zlabel=r'$\mathrm{flattening}\ q / %.2f$' % medianq
        else:
            vmin, vmax= 0.5, 1.2
            zlabel=r'$\mathrm{flattening}\ q$'
    elif options.type.lower() == 'vc':
        vmin, vmax= 0.95, 1.05
        zlabel=r'$V_c / %i\ \mathrm{km\,s}^{-1}$' % int(_REFV0)
        if 'real' in options.outfilename.lower():
           medianvc= numpy.median(plotthis[numpy.isfinite(plotthis)])
           plotthis/= medianvc
           zlabel=r'$V_c / %i\ \mathrm{km\,s}^{-1}$' % int(_REFV0*medianvc)
    elif options.type.lower() == 'rhodm':
        vmin, vmax= 0.00, 0.02
        zlabel=r'$\rho_{\mathrm{DM}}(R_0,0)\ [M_\odot\,\mathrm{pc}^{-3}]$'
    elif options.type.lower() == 'rhoo':
        vmin, vmax= 0.00, 0.2
        zlabel=r'$\rho(R_0,0)\ [M_\odot\,\mathrm{pc}^{-3}]$'
    elif options.type.lower() == 'surfz':
        vmin, vmax= 50.,120.
        zlabel=r'$\Sigma(%.1f\,\mathrm{kpc};R_0)\ [M_\odot\,\mathrm{pc}^{-2}]$' % options.height
    elif options.type.lower() == 'surfzdisk':
        vmin, vmax= 20.,90.
        zlabel=r'$\Sigma_{\mathrm{disk}}(%.1f\,\mathrm{kpc};R_0)\ [M_\odot\,\mathrm{pc}^{-2}]$' % options.height
    elif options.type.lower() == 'kz':
        vmin, vmax= 50.,120.
        zlabel=r'$K_Z(%.1f\,\mathrm{kpc};R_0)\ [M_\odot\,\mathrm{pc}^{-2}]$' % options.height
    elif options.type.lower() == 'dlnvcdlnr':
        vmin, vmax= -0.3,0.2
        zlabel=r'$\frac{\mathrm{d} \ln V_c}{\mathrm{d} \ln R}$'
    elif options.type.lower() == 'fd':
        vmin, vmax= 0.00, 1.
        zlabel=r'$V_{c,\mathrm{disk}} / V_c\,(R_0)$'
    elif options.type.lower() == 'fh':
        vmin, vmax= 0.00, 1.
        zlabel=r'$V_{c,\mathrm{halo}} / V_c\,(R_0)$'
    elif options.type.lower() == 'fb':
        vmin, vmax= 0.00, .1
        zlabel=r'$V_{c,\mathrm{halo}} / V_c\,(R_0)$'
    elif options.type.lower() == 'rd':
        vmin, vmax= 0.2, 0.6
        zlabel=r'$R_d / R_0$'
    elif options.type.lower() == 'zh':
        vmin, vmax= 0.0125, 0.075
        zlabel=r'$z_h / R_0$'
    elif options.type.lower() == 'plhalo':
        vmin, vmax= 0.0, 2.
        zlabel=r'$\alpha\ \mathrm{in}\ \rho_{\mathrm{halo}} \propto 1/r^\alpha$'
    elif options.type.lower() == 'qhalo':
        vmin, vmax= 0.4, 1.15
        zlabel=r'$q_\Phi^{\mathrm{halo}}$'
    elif options.type.lower() == 'ndata':
        vmin, vmax= numpy.nanmin(plotthis), numpy.nanmax(plotthis)
        zlabel=r'$N_\mathrm{data}$'
    elif options.type == 'hr':
        if options.relative:
            vmin, vmax= 0.8, 1.2
            zlabel=r'$\mathrm{input / output\ radial\ scale\ length}$'
        else:
            vmin, vmax= 1.35,4.5
            zlabel=r'$\mathrm{model\ radial\ scale\ length\ [kpc]}$'
    elif options.type == 'sz':
        if options.relative:
            vmin, vmax= 0.8, 1.2
            zlabel= r'$\mathrm{input / output\ model}\ \sigma_z$'
        else:
            vmin, vmax= 10.,60.
            zlabel= r'$\mathrm{model}\ \sigma_z\ [\mathrm{km\ s}^{-1}]$'
    elif options.type == 'sr':
        if options.relative:
            vmin, vmax= 0.8, 1.2
            zlabel= r'$\mathrm{input/output\ model}\ \sigma_R$'
        else:
            vmin, vmax= 10.,60.
            zlabel= r'$\mathrm{model}\ \sigma_R\ [\mathrm{km\ s}^{-1}]$'
    elif options.type == 'srsz':
        vmin, vmax= 0.5,2.
        zlabel= r'$\sigma_R/\sigma_z\ (R_0,1\,\mathrm{kpc})$'
    elif options.type == 'outfrac':
        vmin, vmax= 0., 1.
        zlabel= r'$\mathrm{relative\ number\ of\ outliers}$'
    elif options.type == 'afe':
        vmin, vmax= 0.0,.5
        zlabel=r'$[\alpha/\mathrm{Fe}]$'
    elif options.type == 'feh':
        vmin, vmax= -1.6,0.4
        zlabel=r'$[\mathrm{Fe/H}]$'
    elif options.type == 'fehafe':
        vmin, vmax= -.7,.7
        zlabel=r'$[\mathrm{Fe/H}]-[\mathrm{Fe/H}]_{1/2}([\alpha/\mathrm{Fe}])$'
    elif options.type == 'afefeh':
        vmin, vmax= -.15,.15
        zlabel=r'$[\alpha/\mathrm{Fe}]-[\alpha/\mathrm{Fe}]_{1/2}([\mathrm{Fe/H}])$'
    if options.tighten:
        xrange=[-1.6,0.5]
        yrange=[-0.05,0.55]
    else:
        xrange=[-2.,0.5]
        yrange=[-0.2,0.6]
    #Now plot
    if options.type.lower() == 'afe' or options.type.lower() == 'feh' \
            or options.type.lower() == 'fehafe':
        #Gather everything
        afe, feh, ndata, x, y= [], [], [], [], []
        for ii in range(len(plotthis)):
            afe.append(plotthis[ii][1])
            feh.append(plotthis[ii][0])
            ndata.append(plotthis[ii][2])
            x.append(plotthis[ii][3])
            y.append(plotthis[ii][4])
        afe= numpy.array(afe)
        feh= numpy.array(feh)
        ndata= numpy.array(ndata)
        x= numpy.array(x)
        y= numpy.array(y)
        #Process ndata
        ndata= ndata**.5
        ndata= ndata/numpy.median(ndata)*35.
        if options.type.lower() == 'afe':
            plotc= afe
        elif options.type.lower() == 'feh':
            plotc= feh
        elif options.type.lower() == 'afefeh':
            #Go through the bins to determine whether feh is high or low for this alpha
            plotc= numpy.zeros(len(afe))
            for ii in range(tightbinned.npixfeh()):
                fehbin= ii
                data= tightbinned.data[(tightbinned.data.feh > tightbinned.fehedges[fehbin])\
                                           *(tightbinned.data.feh <= tightbinned.fehedges[fehbin+1])]
                medianafe= numpy.median(data.afe)
                for jj in range(len(afe)):
                    if feh[jj] == tightbinned.feh(ii):
                        plotc[jj]= afe[jj]-medianafe
        else:
            #Go through the bins to determine whether feh is high or low for this alpha
            plotc= numpy.zeros(len(feh))
            for ii in range(tightbinned.npixafe()):
                afebin= ii
                data= tightbinned.data[(tightbinned.data.afe > tightbinned.afeedges[afebin])\
                                           *(tightbinned.data.afe <= tightbinned.afeedges[afebin+1])]
                medianfeh= numpy.median(data.feh)
                for jj in range(len(feh)):
                    if afe[jj] == tightbinned.afe(ii):
                        plotc[jj]= feh[jj]-medianfeh
        onedhists=False
        if options.subtype.lower() == 'qvc':
            if not options.flatten is None:
                xrange= [0.9,1.1]
                xlabel=r'$\mathrm{flattening}\ q / %.1f$' % options.flatten
            elif 'real' in options.outfilename.lower():
                xrange= [0.9,1.1]
                medianq= numpy.median(x[numpy.isfinite(x)])
                x/= medianq
                xlabel=r'$\mathrm{flattening}\ q / %.2f$' % medianq
            else:
                xrange= [0.5, 1.2]
                xlabel=r'$\mathrm{flattening}\ q$'
            yrange= [0.95, 1.05]
            ylabel=r'$V_c / %i\ \mathrm{km\,s}^{-1}$' % int(_REFV0)
            if 'real' in options.outfilename.lower():
                medianvc= numpy.median(y[numpy.isfinite(y)])
                y/= medianvc
                ylabel=r'$V_c / %i\ \mathrm{km\,s}^{-1}$' % int(_REFV0*medianvc)
        elif options.subtype.lower() == 'rdzh':
            yrange= [0.0125,0.1]
            xrange= [0.2,0.8]
            xlabel=r'$R_d / R_0$'
            ylabel=r'$z_h / R_0$'
        elif options.subtype.lower() == 'rdplhalo':
            yrange= [0.,2.]
            xrange= [0.2,0.8]
            xlabel=r'$R_d / R_0$'
            ylabel=r'$\alpha\ \mathrm{in}\ \rho_{\mathrm{halo}} \propto 1/r^\alpha$'
        elif options.subtype.lower() == 'vc14plhalo':
            yrange= [210.,280.]
            xrange= [0.,2.]
            xlabel=r'$\alpha\ \mathrm{in}\ \rho_{\mathrm{halo}} \propto 1/r^\alpha$'
            ylabel=r'$V_c (R=14\,\mathrm{kpc})\ [\mathrm{km\,s}^{-1}$]'
        elif options.subtype.lower() == 'zhplhalo':
            yrange= [0.,2.]
            xrange= [0.0125,0.1]

            ylabel=r'$\alpha\ \mathrm{in}\ \rho_{\mathrm{halo}} \propto 1/r^\alpha$'
            xlabel=r'$z_h / R_0$'
        elif options.subtype.lower() == 'rhodmplhalo':
            xrange= [0.,0.02]
            yrange= [0.,2.]
            ylabel=r'$\alpha\ \mathrm{in}\ \rho_{\mathrm{halo}} \propto 1/r^\alpha$'
            xlabel=r'$\rho_{\mathrm{DM}}(R_0,0)\ [M_\odot\,\mathrm{pc}^{-3}]$'
        elif options.subtype.lower() == 'rhodmzh':
            yrange= [0.0125,0.1]
            xrange= [0.,0.02]
            ylabel=r'$z_h / R_0$'
            xlabel=r'$\rho_{\mathrm{DM}}(R_0,0)\ [M_\odot\,\mathrm{pc}^{-3}]$'
        elif options.subtype.lower() == 'rhoozh':
            yrange= [0.0125,0.1]
            xrange= [0.,0.2]
            ylabel=r'$z_h / R_0$'
            xlabel=r'$\rho(R_0,0)\ [M_\odot\,\mathrm{pc}^{-3}]$'
        elif options.subtype.lower() == 'surfzzh':
            yrange= [0.0125,0.1]
            xrange= [50.+20.*(options.height-1.1),120.+20.*(options.height-1.1)]
            ylabel=r'$z_h / R_0$'
            xlabel=r'$\Sigma(%.1f\,\mathrm{kpc};R_0)\ [M_\odot\,\mathrm{pc}^{-2}]$' % options.height
        elif options.subtype.lower() == 'rhodmsurfz':
            yrange= [50.+20.*(options.height-1.1),120.+20.*(options.height-1.1)]
            xrange= [0.,0.02]
            ylabel=r'$\Sigma(%.1f\,\mathrm{kpc};R_0)\ [M_\odot\,\mathrm{pc}^{-2}]$' % options.height
            xlabel=r'$\rho_{\mathrm{DM}}(R_0,0)\ [M_\odot\,\mathrm{pc}^{-3}]$'
        elif options.subtype.lower() == 'rhodmrd':
            yrange= [0.2,0.8]
            xrange= [0.,0.02]
            ylabel=r'$R_d / R_0$'
            xlabel=r'$\rho_{\mathrm{DM}}(R_0,0)\ [M_\odot\,\mathrm{pc}^{-3}]$'
        elif options.subtype.lower() == 'rdvc':
            yrange= [210.,250.]
            xrange= [0.2,0.8]
            xlabel=r'$R_d / R_0$'
            ylabel=r'$V_c\ [\mathrm{km\,s}^{-1}]$'
        elif options.subtype.lower() == 'zhvc':
            yrange= [210.,250.]
            xrange= [0.0125,0.1]
            xlabel=r'$z_h / R_0$'
            ylabel=r'$V_c\ [\mathrm{km\,s}^{-1}]$'
        elif options.subtype.lower() == 'dlnvcdlnrvc':
            yrange= [210.,250.]
            xrange= [-0.2,0.07]
            xlabel=r'$\mathrm{d}\ln V_c / \mathrm{d}\ln R\, (R_0)$'
            ylabel=r'$V_c\ [\mathrm{km\,s}^{-1}]$'
            onedhists=True
        elif options.subtype.lower() == 'dlnvcdlnrplhalo':
            yrange= [0.,2.]
            ylabel=r'$\alpha\ \mathrm{in}\ \rho_{\mathrm{halo}} \propto 1/r^\alpha$'
            xrange= [-0.2,0.07]
            xlabel=r'$\mathrm{d}\ln V_c / \mathrm{d}\ln R\, (R_0)$'
        elif options.subtype.lower() == 'dlnvcdlnrzh':
            yrange= [0.0125,0.1]
            ylabel=r'$z_h / R_0$'
            xrange= [-0.2,0.07]
            xlabel=r'$\mathrm{d}\ln V_c / \mathrm{d}\ln R\, (R_0)$'
        elif options.subtype.lower() == 'rhodmvc':
            yrange= [210.,250.]
            xrange= [0.,0.02]
            ylabel=r'$V_c\ [\mathrm{km\,s}^{-1}]$'
            xlabel=r'$\rho_{\mathrm{DM}}(R_0,0)\ [M_\odot\,\mathrm{pc}^{-3}]$'
        elif options.subtype.lower() == 'plhalovc':
            yrange= [210.,250.]
            xrange= [0.,2.]
            xlabel=r'$\alpha\ \mathrm{in}\ \rho_{\mathrm{halo}} \propto 1/r^\alpha$'
            ylabel=r'$V_c\ [\mathrm{km\,s}^{-1}$]'
        bovy_plot.bovy_print(fig_height=3.87,fig_width=5.)
        ax= bovy_plot.bovy_plot(x,y,
                            s=ndata,c=plotc,
                            cmap='jet',
                            xlabel=xlabel,ylabel=ylabel,
                            clabel=zlabel,
                            xrange=xrange,yrange=yrange,
                            vmin=vmin,vmax=vmax,
                            scatter=True,edgecolors='none',
                            colorbar=True-onedhists,
                            onedhists=onedhists,
                            onedhistxnormed=onedhists,
                            onedhistynormed=onedhists,
                            bins=15)
        if onedhists:
            axS, axx, axy= ax
        if options.subtype.lower() == 'dlnvcdlnrvc':
            #Plot prior on one-d axes
            sb= numpy.linspace(-0.2,0.0399,1001)
            fsb= numpy.exp(numpy.log((0.04-sb)/0.04)-(0.04-sb)/0.04)
            fsb/= numpy.sum(fsb)*(sb[1]-sb[0])
            axx.plot(sb,fsb,'-',color='0.65')
            tvc= numpy.linspace(150.,350.,1001)
            fvc= numpy.exp(-(tvc-225.)**2./2./15.**2.)
            fvc/= numpy.sum(fvc)*(tvc[1]-tvc[0])
            axy.plot(fvc,tvc,'-',color='0.65')
    else:
        bovy_plot.bovy_print()
        bovy_plot.bovy_dens2d(plotthis.T,origin='lower',cmap='jet',
                              interpolation='nearest',
                              xlabel=r'$[\mathrm{Fe/H}]$',
                              ylabel=r'$[\alpha/\mathrm{Fe}]$',
                              zlabel=zlabel,
                              xrange=xrange,yrange=yrange,
                              vmin=vmin,vmax=vmax,
                              contours=False,
                              colorbar=True,shrink=0.78)
        if options.type.lower() == 'q' or options.type.lower() == 'vc' \
                or options.relative or options.type.lower() == 'rd' \
                or options.type.lower() == 'fd' \
                or options.type.lower() == 'fh' \
                or options.type.lower() == 'fb' \
                or options.type.lower() == 'plhalo' \
                or options.type.lower() == 'surfz' \
                or options.type.lower() == 'surfzdisk' \
                or options.type.lower() == 'rhoo' \
                or options.type.lower() == 'qhalo' \
                or options.type.lower() == 'kz':
            bovy_plot.bovy_text(r'$\mathrm{median} = %.2f \pm %.2f$' % (numpy.median(plotthis[numpy.isfinite(plotthis)]),
                                                                        1.4826*numpy.median(numpy.fabs(plotthis[numpy.isfinite(plotthis)]-numpy.median(plotthis[numpy.isfinite(plotthis)])))),
                                bottom_left=True,size=14.)
        if options.type.lower() == 'zh' or options.type.lower() == 'rhodm':
            bovy_plot.bovy_text(r'$\mathrm{median} = %.4f \pm %.4f$' % (numpy.median(plotthis[numpy.isfinite(plotthis)]),
                                                                        1.4826*numpy.median(numpy.fabs(plotthis[numpy.isfinite(plotthis)]-numpy.median(plotthis[numpy.isfinite(plotthis)])))),
                                bottom_left=True,size=14.)
    bovy_plot.bovy_end_print(options.outfilename)
    return None
Example #13
0
def plotActionData(options,args):
    #Read the data
    print "Reading the data ..."
    raw= read_rawdata(options)
    #Setup error mc integration
    options.nmcerr= 1#in case this isn't set correctly
    raw, errstuff= setup_err_mc(raw,options)
    #Bin the data
    binned= pixelAfeFeh(raw,dfeh=options.dfeh,dafe=options.dafe)
    #Map the bins with ndata > minndata in 1D
    fehs, afes= [], []
    for ii in range(len(binned.fehedges)-1):
        for jj in range(len(binned.afeedges)-1):
            data= binned(binned.feh(ii),binned.afe(jj))
            if len(data) < options.minndata:
                continue
            #print binned.feh(ii), binned.afe(jj), len(data)
            fehs.append(binned.feh(ii))
            afes.append(binned.afe(jj))
    nabundancebins= len(fehs)
    fehs= numpy.array(fehs)
    afes= numpy.array(afes)
    #print numpy.argmin((fehs+0.25)**2.+(afes-0.175)**2.)
    #Setup potential
    params= numpy.array([-1.33663190049,0.998420232634,-3.49031638164,0.31949840593,-1.63965169376])
    try:
        pot= setup_potential(params,options,0)#Assume that the potential parameters come from a file with a single set of df parameters first
    except RuntimeError: #if this set of parameters gives a nonsense potential
        raise
    ro= 1.
    vo= params[1]
    aA= setup_aA(pot,options)
    jr, lz, jz= [], [], []
    #Get data ready
    params= [None,None,None,None,None,None,params[0],params[1],params[2],params[3],params[4]]
    for indx in range(len(fehs)):
        if numpy.log(monoAbundanceMW.hr(fehs[indx],afes[indx],k=(options.sample.lower() == 'k'))/8.) > -0.5 :
            continue
        R,vR,vT,z,vz,e,ee,eee= prepare_coordinates(params,indx,fehs,afes,binned,
                                          errstuff,
                                          options,1)
        tjr, tlz, tjz= aA(R.flatten(),vR.flatten(),vT.flatten(),z.flatten(),vz.flatten())
        jr.extend(list(tjr))
        lz.extend(list(tlz))
        jz.extend(list(tjz))
    #Now plot
    jr= numpy.array(jr).flatten()*ro*vo*_REFR0*_REFV0
    lz= numpy.array(lz).flatten()*ro*vo*_REFR0*_REFV0
    jz= numpy.array(jz).flatten()*ro*vo*_REFR0*_REFV0
    bovy_plot.bovy_print()
    levels= special.erf(numpy.sqrt(0.5)*numpy.arange(1,3))
    levels= list(levels)
    levels.append(1.01)
    print len(jr)
    if options.type.lower() == 'lzjr':
        axScatter, axHistx,axHisty= bovy_plot.scatterplot(lz/220.,jr/220.,',',
                              xlabel=r'$L_z\ (220\,\mathrm{km\,s}^{-1}\,\mathrm{kpc})$',
                              ylabel=r'$J_R\ (220\,\mathrm{km\,s}^{-1}\,\mathrm{kpc})$',
                              xrange=[0.,3600./220.],
                              yrange=[0.,500./220.],
                              onedhists=True,
                              bins=41,
                              levels=levels,retAxes=True)
        axScatter.set_xlim(0.,3600./220.)
        axScatter.set_ylim(0.,500./220.)
        axScatter.set_xlabel(r'$L_z\ (220\,\mathrm{km\,s}^{-1}\,\mathrm{kpc})$')
        axScatter.set_ylabel(r'$J_R\ (220\,\mathrm{km\,s}^{-1}\,\mathrm{kpc})$')
        axHistx.set_xlim( axScatter.get_xlim() )
        axHisty.set_ylim( axScatter.get_ylim() )
        #Calculate locus of 6 kpc pericenter
        nlzs= 1001
        plzs= numpy.linspace(0.,6./8.,nlzs)
        pjrs= numpy.zeros(nlzs)
        for ii in range(nlzs):
            pjrs[ii]= aA(6./8.,0.,plzs[ii]/6.*8.,0.,0.)[0]*ro*vo*_REFR0*_REFV0
        bovy_plot.bovy_plot(plzs*ro*vo*_REFR0*_REFV0/220.,
                            pjrs/220.,'k--',overplot=True)
        plzs= numpy.linspace(11./8.,2.,nlzs)
        pjrs= numpy.zeros(nlzs)
        for ii in range(nlzs):
            pjrs[ii]= aA(11./8.,0.,plzs[ii]/11.*8.,0.,0.)[0]*ro*vo*_REFR0*_REFV0
        bovy_plot.bovy_plot(plzs*ro*vo*_REFR0*_REFV0/220.,
                            pjrs/220.,'k--',overplot=True)
    elif options.type.lower() == 'jrjz':
        axScatter, axHistx, axHisty= bovy_plot.scatterplot(jr/220.,jz/220.,color='k',marker=',',ls='none',
                              xlabel=r'$J_R\ (220\,\mathrm{km\,s}^{-1}\,\mathrm{kpc})$',
                              ylabel=r'$J_Z\ (220\,\mathrm{km\,s}^{-1}\,\mathrm{kpc})$',
                              xrange=[0.,500./220.],
                              yrange=[0.,250./220.],
                              bins=41,
                              onedhists=True,
                              levels=levels,
                                                           retAxes=True)
        axScatter.set_xlim(0.,500./220.)
        axScatter.set_ylim(0.,250./220.)
        axScatter.set_ylabel(r'$J_Z\ (220\,\mathrm{km\,s}^{-1}\,\mathrm{kpc})$')
        axScatter.set_xlabel(r'$J_R\ (220\,\mathrm{km\,s}^{-1}\,\mathrm{kpc})$')
        axHistx.set_xlim( axScatter.get_xlim() )
        axHisty.set_ylim( axScatter.get_ylim() )
    #if options.sample == 'g':
    #    bovy_plot.bovy_text(r'$\mathrm{G\!-\!type\ dwarfs}$',top_right=True,size=16.)
    #elif options.sample == 'k':
    #    bovy_plot.bovy_text(r'$\mathrm{K\!-\!type\ dwarfs}$',top_right=True,size=16.)
    bovy_plot.bovy_end_print(options.outfilename)
    return None
Example #14
0
def calcDFResults(options,args,boot=True,nomedian=False):
    if len(args) == 2 and options.sample == 'gk':
        toptions= copy.copy(options)
        toptions.sample= 'g'
        toptions.select= 'all'
        outg= calcDFResults(toptions,[args[0]],boot=boot,nomedian=True)
        toptions.sample= 'k'
        toptions.select= 'program'
        outk= calcDFResults(toptions,[args[1]],boot=boot,nomedian=True)
        #Combine
        out= {}
        for k in outg.keys():
            valg= outg[k]
            valk= outk[k]
            val= numpy.zeros(len(valg)+len(valk))
            val[0:len(valg)]= valg
            val[len(valg):len(valg)+len(valk)]= valk
            out[k]= val
        if nomedian: return out
        else: return add_median(out,boot=boot)
    raw= read_rawdata(options)
    #Bin the data
    binned= pixelAfeFeh(raw,dfeh=options.dfeh,dafe=options.dafe)
    tightbinned= binned
    #Map the bins with ndata > minndata in 1D
    fehs, afes= [], []
    counter= 0
    abindx= numpy.zeros((len(binned.fehedges)-1,len(binned.afeedges)-1),
                        dtype='int')
    for ii in range(len(binned.fehedges)-1):
        for jj in range(len(binned.afeedges)-1):
            data= binned(binned.feh(ii),binned.afe(jj))
            if len(data) < options.minndata:
                continue
            #print binned.feh(ii), binned.afe(jj), len(data)
            fehs.append(binned.feh(ii))
            afes.append(binned.afe(jj))
            abindx[ii,jj]= counter
            counter+= 1
    nabundancebins= len(fehs)
    fehs= numpy.array(fehs)
    afes= numpy.array(afes)
    #Load each of the solutions
    sols= []
    chi2s= []
    savename= args[0]
    initname= options.init
    for ii in range(nabundancebins):
        spl= savename.split('.')
        newname= ''
        for jj in range(len(spl)-1):
            newname+= spl[jj]
            if not jj == len(spl)-2: newname+= '.'
        newname+= '_%i.' % ii
        newname+= spl[-1]
        savefilename= newname
        #Read savefile
        try:
            savefile= open(savefilename,'rb')
        except IOError:
            print "WARNING: MISSING ABUNDANCE BIN"
            sols.append(None)
            chi2s.append(None)
        else:
            sols.append(pickle.load(savefile))
            chi2s.append(pickle.load(savefile))
            savefile.close()
        #Load samples as well
        if options.mcsample:
            #Do the same for init
            spl= initname.split('.')
            newname= ''
            for jj in range(len(spl)-1):
                newname+= spl[jj]
                if not jj == len(spl)-2: newname+= '.'
            newname+= '_%i.' % ii
            newname+= spl[-1]
            options.init= newname
    mapfehs= monoAbundanceMW.fehs()
    mapafes= monoAbundanceMW.afes()
    #Now plot
    #Run through the pixels and gather
    fehs= []
    afes= []
    ndatas= []
    zmedians= []
    #Basic parameters
    hrs= []
    srs= []
    szs= []
    hsrs= []
    hszs= []
    outfracs= []
    rds= []
    rdexps= []
    vcs= []
    zhs= []
    zhexps= []
    dlnvcdlnrs= []
    plhalos= []
    rorss= []
    dvts= []
    #derived parameters
    surfzs= []
    surfz800s= []
    surfzdisks= []
    massdisks= []
    rhoos= []
    rhooalts= []
    rhodms= []
    vcdvcros= []
    vcdvcs= []
    vescs= []
    mloglikemins= []
    for ii in range(tightbinned.npixfeh()):
        for jj in range(tightbinned.npixafe()):
            data= binned(tightbinned.feh(ii),tightbinned.afe(jj))
            if len(data) < options.minndata:
                continue
            #Find abundance indx
            fehindx= binned.fehindx(tightbinned.feh(ii))#Map onto regular binning
            afeindx= binned.afeindx(tightbinned.afe(jj))
            solindx= abindx[fehindx,afeindx]
            monoabindx= numpy.argmin((tightbinned.feh(ii)-mapfehs)**2./0.01 \
                                         +(tightbinned.afe(jj)-mapafes)**2./0.0025)
            if sols[solindx] is None:
                continue
            try:
                pot= setup_potential(sols[solindx],options,1,interpDens=True,
                                     interpdvcircdr=True,returnrawpot=True)
            except RuntimeError:
                print "A bin has an unphysical potential ..."
                continue
#            if 'dpdisk' in options.potential.lower():
#                try:
#                    rawpot= setup_potential(sols[solindx],options,1,
#                                            returnrawpot=True)
#                except RuntimeError:
#                    print "A bin has an unphysical potential ..."
#                    continue
            fehs.append(tightbinned.feh(ii))
            afes.append(tightbinned.afe(jj))
            zmedians.append(numpy.median(numpy.fabs(data.zc+_ZSUN)))
            #vc
            s= get_potparams(sols[solindx],options,1)
            ro= get_ro(sols[solindx],options)
            if options.fixvo:
                vcs.append(options.fixvo*_REFV0)
            else:
                vcs.append(s[1]*_REFV0)
            #rd
            rds.append(numpy.exp(s[0]))
            #zh
            zhs.append(numpy.exp(s[2-(1-(options.fixvo is None))]))
            #rdexp & zhexp
            if options.sample == 'g': tz= 1.1/_REFR0/ro
            elif options.sample == 'k': tz= 0.84/_REFR0/ro
            if 'mpdisk' in options.potential.lower() or 'mwpotential' in options.potential.lower():
                mp= potential.MiyamotoNagaiPotential(a=rds[-1],b=zhs[-1])
                #rdexp
                f= mp.dens(1.,0.125)
                dr= 10.**-3.
                df= (mp.dens(1.+dr/2.,0.125)-mp.dens(1.-dr/2.,0.125))/dr
                rdexps.append(-f/df)
                #zhexp
                f= mp.dens(1.,tz)
                dz= 10.**-3.
                df= (mp.dens(1.,tz+dz/2.)-mp.dens(1.,tz-dz/2.))/dz
                zhexps.append(-f/df)
            elif 'dpdisk' in options.potential.lower():
                rdexps.append(numpy.exp(s[0]))
                zhexps.append(numpy.exp(s[2-(1-(options.fixvo is None))]))
            #ndata
            ndatas.append(len(data))
            #hr
            dfparams= get_dfparams(sols[solindx],0,options)
            if options.relative:
                thishr= monoAbundanceMW.hr(mapfehs[monoabindx],mapafes[monoabindx])
                hrs.append(dfparams[0]*_REFR0/thishr)
            else:
                hrs.append(dfparams[0]*_REFR0)
            #sz
            if options.relative:
                thissz= monoAbundanceMW.sigmaz(mapfehs[monoabindx],mapafes[monoabindx])
                szs.append(dfparams[2]*_REFV0/thissz)
            else:
                szs.append(dfparams[2]*_REFV0)
            #sr
            if options.relative:
                thissr= monoAbundanceMW.sigmaz(mapfehs[monoabindx],mapafes[monoabindx])*2.#BOVY: UPDATE
                srs.append(dfparams[1]*_REFV0/thissr)
            else:
                srs.append(dfparams[1]*_REFV0)
            #hsr
            hsrs.append(dfparams[3]*_REFR0)
            #hsz
            hszs.append(dfparams[4]*_REFR0)
            #outfrac
            outfracs.append(dfparams[5])
            #rhodm
            #Setup potential
            vo= get_vo(sols[solindx],options,1)
            if 'mwpotential' in options.potential.lower():
                rhodms.append(pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.)
            elif options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                rhodms.append(pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.)
            elif options.potential.lower() == 'mpdiskflplhalofixplfixbulgeflat':
                rhodms.append(pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.)
            elif options.potential.lower() == 'dpdiskplhalofixbulgeflat' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgas' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgasalt' \
                    or options.potential.lower() == 'dpdiskflplhalofixbulgeflatwgas':
                rhodms.append(pot[1].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.)
            #rhoo
            rhoos.append(potential.evaluateDensities(1.,0.,pot)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.)
            #surfz
            surfzs.append(2.*integrate.quad((lambda zz: potential.evaluateDensities(1.,zz,pot)),0.,options.height/_REFR0/ro)[0]*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*_REFR0*ro)
            #surfz800
            surfz800s.append(2.*integrate.quad((lambda zz: potential.evaluateDensities(1.,zz,pot)),0.,0.8/_REFR0/ro)[0]*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*_REFR0*ro)
            #surzdisk
            if 'mpdisk' in options.potential.lower() or 'mwpotential' in options.potential.lower():
                surfzdisks.append(2.*integrate.quad((lambda zz: potential.evaluateDensities(1.,zz,pot[0])),0.,options.height/_REFR0/ro)[0]*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*_REFR0*ro)
                surfzdiskzm= 2.*integrate.quad((lambda zz: potential.evaluateDensities(1.,zz,pot[0])),0.,tz)[0]*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*_REFR0*ro
            elif 'dpdisk' in options.potential.lower():
                surfzdisks.append(2.*pot[0].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.*zhexps[-1]*ro*_REFR0*1000.)
            #rhooalt
            if options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                rhooalts.append(rhoos[-1]-pot[0].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.+surfzdiskzm/2./zhexps[-1]/ro/_REFR0/1000./(1.-numpy.exp(-tz/zhexps[-1])))
            elif options.potential.lower() == 'dpdiskplhalofixbulgeflat' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgas' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgasalt' \
                    or options.potential.lower() == 'dpdiskflplhalofixbulgeflatwgas':
                rhooalts.append(rhoos[-1])
            #massdisk
            if options.potential.lower() == 'dpdiskplhalofixbulgeflat' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgas' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgasalt' \
                    or options.potential.lower() == 'dpdiskflplhalofixbulgeflatwgas':
                rhod= pot[0].dens(1.,0.)*_REFV0**2.*vo**2./_REFR0**2./ro**2./4.302*10.**-3.
            else:
                rhod= surfzdiskzm/2./zhexps[-1]/ro/_REFR0/1000./(1.-numpy.exp(-tz/zhexps[-1]))
            massdisks.append(rhod*2.*zhexps[-1]*numpy.exp(1./rdexps[-1])*rdexps[-1]**2.*2.*numpy.pi*(ro*_REFR0)**3./10.)
            #plhalo
            if options.potential.lower() == 'mpdiskplhalofixbulgeflat':
                plhalos.append(pot[1].alpha)
                plhalos.append((1.-pot[1].alpha)/(pot[1].alpha-3.))
            elif options.potential.lower() == 'dpdiskplhalofixbulgeflat' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgas' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgasalt' \
                    or options.potential.lower() == 'dpdiskflplhalofixbulgeflatwgas':
                plhalos.append(pot[1].alpha)
                rorss.append((1.-pot[1].alpha)/(pot[1].alpha-3.))
            #dlnvcdlnr
            if options.potential.lower() == 'dpdiskplhalofixbulgeflat' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgas' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgasalt' \
                    or options.potential.lower() == 'dpdiskflplhalofixbulgeflatwgas':
                dlnvcdlnrs.append(potential.dvcircdR(pot,1.))
            else:
                dlnvcdlnrs.append(potential.dvcircdR(pot,1.))
            #vcdvc
            if options.potential.lower() == 'dpdiskplhalofixbulgeflat' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgas' \
                    or options.potential.lower() == 'dpdiskplhalofixbulgeflatwgasalt' \
                    or options.potential.lower() == 'dpdiskflplhalofixbulgeflatwgas':
                vcdvcros.append(pot[0].vcirc(1.)/potential.vcirc(pot,1.))
                vcdvcs.append(pot[0].vcirc(2.2*rdexps[-1])/potential.vcirc(pot,2.2*rdexps[-1]))
            else:
                vcdvcros.append(pot[0].vcirc(1.)/potential.vcirc(pot,1.))
                vcdvcs.append(pot[0].vcirc(2.2*rdexps[-1])/potential.vcirc(pot,2.2*rdexps[-1]))
            #mloglike
            mloglikemins.append(chi2s[solindx])
            #escape velocity
            vescs.append(potential.vesc(pot,1.)*_REFV0)
            if options.fitdvt:
                dvts.append(sols[solindx][0])
    #Gather
    fehs= numpy.array(fehs)
    afes= numpy.array(afes)
    zmedians= numpy.array(zmedians)
    ndatas= numpy.array(ndatas)
    #Basic parameters
    hrs= numpy.array(hrs)
    srs= numpy.array(srs)
    szs= numpy.array(szs)
    hsrs= numpy.array(hsrs)
    hszs= numpy.array(hszs)
    outfracs= numpy.array(outfracs)
    vcs= numpy.array(vcs)
    rds= numpy.array(rds)
    zhs= numpy.array(zhs)
    rdexps= numpy.array(rdexps)
    zhexps= numpy.array(zhexps)
    dlnvcdlnrs= numpy.array(dlnvcdlnrs)
    plhalos= numpy.array(plhalos)
    rorss= numpy.array(rorss)
    if options.fitdvt:
        dvts= numpy.array(dvts)
    #derived parameters
    surfzs= numpy.array(surfzs)
    surfz800s= numpy.array(surfz800s)
    surfzdisks= numpy.array(surfzdisks)
    massdisks= numpy.array(massdisks)
    rhoos= numpy.array(rhoos)
    rhooalts= numpy.array(rhooalts)
    rhodms= numpy.array(rhodms)
    vcdvcros= numpy.array(vcdvcros)
    vcdvcs= numpy.array(vcdvcs)
    rexps= numpy.sqrt(2.)*(rds+zhs)/2.2
    mloglikemins= numpy.array(mloglikemins)
    vescs= numpy.array(vescs)
    #Load into dictionary
    out= {}
    out['feh']= fehs
    out['afe']= afes
    out['zmedian']= zmedians
    out['ndata']= ndatas
    out['hr']= hrs
    out['sr']= srs
    out['sz']= szs
    out['hsr']= hsrs
    out['hsz']= hszs
    out['outfrac']= outfracs
    out['vc']= vcs
    out['rd']= rds
    out['zh']= zhs
    out['rdexp']= rdexps
    out['zhexp']= zhexps
    out['dlnvcdlnr']= dlnvcdlnrs
    out['plhalo']= plhalos
    out['rors']= rorss
    out['surfz']= surfzs
    out['surfz800']= surfz800s
    out['surfzdisk']= surfzdisks
    out['massdisk']= massdisks
    out['rhoo']= rhoos
    out['rhooalt']= rhooalts
    out['rhodm']= rhodms
    out['vcdvc']= vcdvcs
    out['vcdvcro']= vcdvcros
    out['rexp']= rexps
    out['mloglikemin']= mloglikemins
    out['vesc']= vescs
    if options.fitdvt:
        out['dvt']= dvts
    if nomedian: return out
    else: return add_median(out,boot=boot)