def mooseWriteSBML(modelpath, filepath, sceneitems={}):
"""Writes loaded model under modelpath to a file in SBML format.
(helper function for writeSBML).
"""
global sbmlImport_, sbmlError_
if not sbmlImport_:
raise ImportError("SBML support could not be loaded because of '%s'" %
sbmlError_)
return _writeSBML.mooseWriteSBML(modelpath, filepath, sceneitems)
def mooseWriteSBML(modelpath, filepath, sceneitems={}):
"""Writes loaded model under modelpath to a file in SBML format.
keyword arguments:\n
modelpath -- model path in moose e.g /model/mymodel \n
filepath -- Path of output file. \n
sceneitems -- dictlist (UserWarning: user need not worry about this) \n
layout position is saved in Annotation field of all the moose Object (pool,Reaction,enzyme)\n
If this function is called from \n
-- GUI, the layout position of moose object is passed \n
-- command line, \n
---if genesis/kkit model is loaded then layout position is taken from the file \n
--- else, auto-coordinates is used for layout position and passed
"""
if sbmlImport_:
return _writeSBML.mooseWriteSBML(modelpath, filepath, sceneitems)
else:
print( sbmlError_ )
return False
def mooseWriteSBML(modelpath, filepath, sceneitems={}):
"""Writes loaded model under modelpath to a file in SBML format.
keyword arguments:\n
modelpath -- model path in moose e.g /model/mymodel \n
filepath -- Path of output file. \n
sceneitems -- dictlist (UserWarning: user need not worry about this) \n
layout position is saved in Annotation field of all the moose Object (pool,Reaction,enzyme)\n
If this function is called from \n
-- GUI, the layout position of moose object is passed \n
-- command line, \n
---if genesis/kkit model is loaded then layout position is taken from the file \n
--- else, auto-coordinates is used for layout position and passed
"""
if sbmlImport_:
return _writeSBML.mooseWriteSBML(modelpath, filepath, sceneitems)
else:
print( sbmlError_ )
return False
def mooseWriteSBML(modelpath, filepath, sceneitems={}):
"""mooseWriteSBML: Writes loaded model under modelpath to a file in SBML format.
Parameters
----------
modelpath : str
model path in moose e.g /model/mymodel \n
filepath : str
Path of output file. \n
sceneitems : dict
UserWarning: user need not worry about this layout position is saved in
Annotation field of all the moose Object (pool,Reaction,enzyme).
If this function is called from
* GUI - the layout position of moose object is passed
* command line - NA
* if genesis/kkit model is loaded then layout position is taken from the file
* otherwise auto-coordinates is used for layout position.
"""
if sbmlImport_:
return _writeSBML.mooseWriteSBML(modelpath, filepath, sceneitems)
else:
logger_.error(sbmlError_)
return False
def mooseWriteSBML(modelpath, filepath, sceneitems={}):
"""mooseWriteSBML: Writes loaded model under modelpath to a file in SBML format.
Parameters
----------
modelpath : str
model path in moose e.g /model/mymodel \n
filepath : str
Path of output file. \n
sceneitems : dict
UserWarning: user need not worry about this layout position is saved in
Annotation field of all the moose Object (pool,Reaction,enzyme).
If this function is called from
* GUI - the layout position of moose object is passed
* command line - NA
* if genesis/kkit model is loaded then layout position is taken from the file
* otherwise auto-coordinates is used for layout position.
"""
if sbmlImport_:
return _writeSBML.mooseWriteSBML(modelpath, filepath, sceneitems)
else:
print( sbmlError_ )
return False