def connectBioModel(self):
connecttoBioModel = BioModelsClientWidget()
if connecttoBioModel.exec_():
pass
filepath = connecttoBioModel.filePath
if filepath:
head, fileName = os.path.split(filepath)
modelName = os.path.splitext(fileName)[0]
pwe = moose.getCwe()
ret = mload.loadFile(str(filepath), '/model/%s' % (modelName), merge=False)
self.objectEditSlot('/',False)
pluginLookup = '%s/%s' % (ret['modeltype'], ret['subtype'])
try:
pluginName = subtype_plugin_map['%s/%s' % (ret['modeltype'], ret['subtype'])]
except KeyError:
pluginName = 'default'
self._loadedModels.append([ret['model'].path,pluginName])
if len(self._loadedModels)>5:
self._loadedModels.pop(0)
if not moose.exists(ret['model'].path+'/info'):
moose.Annotator(ret['model'].path+'/info')
modelAnno = moose.Annotator(ret['model'].path+'/info')
if ret['subtype']:
modelAnno.modeltype = ret['subtype']
else:
modelAnno.modeltype = ret['modeltype']
modelAnno.dirpath = str(dialog.directory().absolutePath())
self.loadedModelsAction(ret['model'].path,pluginName)
self.setPlugin(pluginName, ret['model'].path)
def run_genesis_script(self, filepath, solver):
if self.popup:
self.popup.hide()
abspath = os.path.abspath(filepath)
directory, modulename = os.path.split(abspath)
modelName = os.path.splitext(modulename)[0]
ret = mload.loadFile(str(abspath),'%s' %(modelName),solver,merge=False)
self.setPlugin("kkit", ret["model"].path)
self.setCurrentView("run")
widget = self.plugin.view.getSchedulingDockWidget().widget()
widget.runSimulation()
def checkPlugin(self,dialog):
fileNames = dialog.selectedFiles()
for fileName in fileNames:
modelName = dialog.getTargetPath()
if '/' in modelName:
raise mexception.ElementNameError('Model name cannot contain `/`')
ret = mload.loadFile(str(fileName),'%s' %(modelName),merge=False)
#ret = mload.loadFile(str(fileName), '/model/%s' % (modelName), merge=False)
#This will clear out object editor's objectpath and make it invisible
self.objectEditSlot('/',False)
#if subtype is None, in case of cspace then pluginLookup = /cspace/None
# which will not call kkit plugin so cleaning to /cspace
pluginLookup = '%s/%s' % (ret['modeltype'], ret['subtype'])
try:
pluginName = subtype_plugin_map['%s/%s' % (ret['modeltype'], ret['subtype'])]
except KeyError:
pluginName = 'default'
print(('Loaded model', ret['model'].path))
return ret,pluginName
