def summarise_all(cls):
from morphforge.stdimports import PostSynapticTemplateLibrary, CellLibrary, ChannelLibrary, MorphologyLibrary
types = mrd.SectionNewPage(
"Available class types",
cls.summarise_channeltypes(),
cls.summarise_currentclamptypes(),
cls.summarise_voltageclamptypes(),
cls.summarise_presynaptictriggertypes(),
cls.summarise_postsynaptictemplatetypes(),
cls.summarise_tracemethods(),
)
libraries = mrd.SectionNewPage(
"Library Contents",
ChannelLibrary.summary_table(),
MorphologyLibrary.summary_table(),
PostSynapticTemplateLibrary.summary_table(),
CellLibrary.summary_table(),
)
return mrd.SectionNewPage("Morphforge Configuration", types, libraries)
# A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
# HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
# LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
# DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
# THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
# ----------------------------------------------------------------------
""" Summarise the cells and channels that are registered to an environment
"""
import mredoc
from morphforge.stdimports import PluginMgr, CellLibrary, ChannelLibrary, MorphologyLibrary
import morphforgecontrib.stdimports as mfc
from modelling import *
fname = '~/Desktop/morphforge_channels.pdf'
mredoc.Section('Summary',
CellLibrary.summary_table(),
ChannelLibrary.summary_table(),
MorphologyLibrary.summary_table(),
).to_pdf(fname)
print 'Cell & Channel summary stored at: %s'%fname