def conda_and_pip_install(self, create=True):
"""Return Dockerfile instructions to create conda environment with
desired version of Python and desired conda and pip packages.
"""
conda_cmd = "conda create" if create else "conda install"
cmd = "{} -y -q --name {}".format(conda_cmd, self.env_name)
if self.conda_opts:
cmd = "{} {}".format(cmd, self.conda_opts)
if self.conda_install:
if isinstance(self.conda_install, str):
self.conda_install = self.conda_install.split()
pkgs = _indent_pkgs(len(cmd.split('\n')[-1]), self.conda_install)
cmd += pkgs
# cmd += "\n\t{}".format(self.conda_install)
cmd += "\n&& sync && conda clean -tipsy && sync"
if not self.conda_install and not create:
cmd = ""
if self.pip_install:
if self.conda_install or create:
cmd += "\n&& "
cmd += self._pip_install()
if self.activate:
cmd += self._get_source_activate_cmd()
cmd = indent("RUN", cmd)
self.created_envs.append(self.env_name)
return cmd
def _pip_install(self):
"""Return Dockerfile instruction to install desired pip packages."""
if isinstance(self.pip_install, str):
self.pip_install = self.pip_install.split()
cmd = ('/bin/bash -c "source activate {}'
'\n && pip install -q --no-cache-dir').format(self.env_name)
if self.pip_opts:
cmd = "{} {}".format(cmd, self.pip_opts)
pkgs = _indent_pkgs(len(cmd.split('\n')[-1]), self.pip_install)
return '{}{}"\n&& sync'.format(cmd, pkgs)
def conda_and_pip_install(self, create=True):
"""Return Dockerfile instructions to create conda environment with
desired version of Python and desired conda and pip packages.
"""
conda_cmd = "conda create" if create else "conda install"
cmd = "{} -y -q --name {}".format(conda_cmd, self.env_name)
if self.conda_opts:
cmd = "{} {}".format(cmd, self.conda_opts)
if self.conda_install:
if isinstance(self.conda_install, str):
self.conda_install = self.conda_install.split()
pkgs = _indent_pkgs(len(cmd.split('\n')[-1]), self.conda_install)
cmd += pkgs
# cmd += "\n\t{}".format(self.conda_install)
cmd += "\n&& sync && conda clean -tipsy && sync"
if not self.conda_install and not create:
cmd = ""
if self.pip_install:
if self.conda_install or create:
cmd += "\n&& "
cmd += self._pip_install()
cmd = indent("RUN", cmd)
self.created_envs.append(self.env_name)
if self.add_to_path:
bin_path = posixpath.join(Miniconda.INSTALL_PATH, 'envs',
self.env_name, 'bin')
env_cmd = "ENV PATH={}:$PATH".format(bin_path)
return "\n".join((cmd, env_cmd))
return cmd