Python total_area_per_neurite Examples

Programming Language: Python

Namespace/Package Name: neurom.fst._neuritefunc

Method/Function: total_area_per_neurite

Examples at hotexamples.com: 2

Python total_area_per_neurite - 2 examples found. These are the top rated real world Python examples of neurom.fst._neuritefunc.total_area_per_neurite extracted from open source projects. You can rate examples to help us improve the quality of examples.

Example #1

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File: test_neuritefunc.py Project: nagyistge/NeuroM

def test_total_area_per_neurite():
    def surface(r0, r1, h):
        return pi * (r0 + r1) * sqrt((r0 - r1)**2 + h**2)

    basal_area = surface(1, 1, 5) + surface(1, 0, 5) + surface(1, 0, 6)
    ret = _nf.total_area_per_neurite(SIMPLE, neurite_type=nm.BASAL_DENDRITE)
    nt.assert_almost_equal(ret[0], basal_area)

    axon_area = surface(1, 1, 4) + surface(1, 0, 5) + surface(1, 0, 6)
    ret = _nf.total_area_per_neurite(SIMPLE, neurite_type=nm.AXON)
    nt.assert_almost_equal(ret[0], axon_area)

    ret = _nf.total_area_per_neurite(SIMPLE)
    nt.ok_(np.allclose(ret, [basal_area, axon_area]))

Example #2

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File: test_neuritefunc.py Project: BlueBrain/NeuroM

def test_total_area_per_neurite():
    def surface(r0, r1, h):
        return pi * (r0 + r1) * sqrt((r0 - r1) ** 2 + h ** 2)

    basal_area = surface(1, 1, 5) + surface(1, 0, 5) + surface(1, 0, 6)
    ret = _nf.total_area_per_neurite(SIMPLE,
            neurite_type=nm.BASAL_DENDRITE)
    nt.assert_almost_equal(ret[0], basal_area)

    axon_area = surface(1, 1, 4) + surface(1, 0, 5) + surface(1, 0, 6)
    ret = _nf.total_area_per_neurite(SIMPLE, neurite_type=nm.AXON)
    nt.assert_almost_equal(ret[0], axon_area)

    ret = _nf.total_area_per_neurite(SIMPLE)
    nt.ok_(np.allclose(ret, [basal_area, axon_area]))