Python plot_neuron3d Examples

Example #1

File: test_view.py Project: BlueBrain/NeuroM

def test_neuron3d():
    with get_fig_3d() as (fig, ax):
        view.plot_neuron3d(ax, fst_neuron)
        nt.ok_(ax.get_title() == fst_neuron.name)
        np.testing.assert_allclose(ax.xy_dataLim.get_points(),
                                   [[-40.32853516, -57.600172],
                                    [64.74726272, 48.51626225], ])
        np.testing.assert_allclose(ax.zz_dataLim.get_points().T[0],
                                   (-00.09999862, 54.20408797))

Example #2

File: test_view.py Project: ZeitgeberH/NeuroM

def test_neuron3d():
    with get_fig_3d() as (fig, ax):
        view.plot_neuron3d(ax, fst_neuron)
        ok_(ax.get_title() == fst_neuron.name)
        assert_allclose(ax.xy_dataLim.get_points(),
                                   [[-40.32853516, -57.600172],
                                    [64.74726272, 48.51626225], ])
        assert_allclose(ax.zz_dataLim.get_points().T[0],
                                   (-00.09999862, 54.20408797))

Example #3

File: test_view.py Project: BlueBrain/NeuroM

def test_neuron3d_no_neurites():
    filename = os.path.join(SWC_PATH, 'point_soma.swc')
    with get_fig_3d() as (fig, ax):
        view.plot_neuron3d(ax, load_neuron(filename))

Example #4

File: test_view.py Project: joewgraham/NeuroM

def test_neuron3d_no_neurites():
    filename = Path(SWC_PATH, 'point_soma.swc')
    with get_fig_3d() as (fig, ax):
        view.plot_neuron3d(ax, load_neuron(filename))

Example #5

def test_neuron3d_no_neurites(get_fig_3d):
    filename = Path(SWC_PATH, 'point_soma.swc')
    fig, ax = get_fig_3d
    view.plot_neuron3d(ax, load_neuron(filename))