def __init__(self, cell):
def show_val():
print("Spacer Ra of the model: {}".format(cell.spacer.Ra))
print(
'The starting point is {}, end point is {} with increasing steps of {}'
.format(min_current_var[0], max_current_var[0],
step_current_var[0]))
#Contorl Panel
sim_control = h.HBox()
sim_control.intercept(1)
h.nrncontrolmenu()
attach_current_clamp(cell)
h.xpanel('TEST')
h.xlabel('Choose a simulation to run')
h.xbutton('Spike Protocol', (spike_fig, cell))
h.xbutton('Rheobase Protocol', (fig_rheobase_check, cell))
h.xbutton('Multiple Rheobase Protocol',
(multiple_rheobase_plots_new, cell))
h.xbutton('Increasing Ra Protocol', (fig_ra_rheobase_spacerL, cell))
h.xbutton('Increasing spacer_gpas Protocol',
(fig_g_rheobase_spacerL, cell))
h.xbutton('Increasing cell c_m Protcol',
(fig_cm_rheobase_spacerL, cell))
h.xbutton('Combined Protocol Run', (Combined_Protocol, cell))
h.xpvalue('Rheobase protocol start', min_current_var, 1)
h.xpvalue('Rheobase protocol end', max_current_var, 1)
h.xpvalue('Rheobase step size', step_current_var, 1)
h.xbutton('show value', show_val)
# h.xvalue('enter value', (this_module, 'val'))
h.xpanel()
#Output panel
g = h.Graph()
g.addvar('soma(0.5).v', cell.soma(0.5)._ref_v)
g.addvar('AIS(0.5).v', cell.AIS(0.5)._ref_v)
g.size(0, 1000, -90, 90)
h.graphList[0].append(g)
h.MenuExplore()
sim_control.intercept(0)
sim_control.map()
input()
def xpvalue (self,name,ptr,runner=pr):
"Doesn't work currently"
h.xpanel("")
h.xpvalue(name,ptr,1,runner)
h.xpanel()
#Contorl Panel
sim_control = h.HBox()
sim_control.intercept(1)
h.nrncontrolmenu()
attach_current_clamp(cell)
h.xpanel('TEST')
h.xlabel('Choose a simulation to run')
h.xbutton('Spike Protocol',(spike_fig, cell))
h.xbutton('Rheobase Protocol',(fig_rheobase_check, cell))
h.xbutton('Multiple Rheobase Protocol', (multiple_rheobase_plots_new, cell))
<<<<<<< HEAD
h.xbutton('Increasing Ra Protocol', (fig_ra_rheobase_spacerL, cell))
h.xbutton('Increasing spacer_gpas Protocol', (fig_g_rheobase_spacerL, cell))
h.xbutton('Increasing cell c_m Protcol', (fig_cm_rheobase_spacerL, cell))
h.xbutton('Combined Protocol Run', (temp_stack_ra_scatter, cell))
h.xpvalue('Rheobase protocol start', min_current_var, 1)
h.xpvalue('Rheobase protocol end', max_current_var, 1)
h.xpvalue('Rheobase step size', step_current_var, 1)
=======
h.xbutton('Fig 1', (fig1_rheobase_spacer_dend, cell))
h.xbutton('Fig 2', (fig2_rheobase_spacer_cm, cell))
h.xbutton('Fig 3', (fig3_rheobase_spacer_rm, cell))
h.xbutton('Fig 4', (fig1_rheobase_spacer_dend, cell))
h.xpvalue('enter value', val, 1)
>>>>>>> faea529 (TEST)
h.xbutton('show value', show_val)
# h.xvalue('enter value', (this_module, 'val'))
h.xpanel()
#Output panel
g = h.Graph()
g.addvar('soma(0.5).v', cell.soma(0.5)._ref_v)
from neuron import h
h('foo = 2')
h.variable_domain('foo', 1, 5)
h.units('foo', 'cm')
h.xpanel("test")
h.xvalue("foo", "foo", 1)
h.xpvalue("foo", h._ref_foo, 1)
h.xpanel()