Example #1
0
import sys
import math
import ctypes
import neurongpu as ngpu
from random import randrange
import numpy as np

order = 200
n_test = 100

expected_rate = 30.78
print("Building ...")

ngpu.SetKernelStatus("rnd_seed", 1234) # seed for GPU random numbers

n_receptors = 2

NE = 4 * order       # number of excitatory neurons
NI = 1 * order       # number of inhibitory neurons
n_neurons = NE + NI  # number of neurons in total

CE = 800   # number of excitatory synapses per neuron
CI = CE//4  # number of inhibitory synapses per neuron

Wex = 0.05
Win = 0.35

# poisson generator parameters
poiss_rate = 20000.0 # poisson signal rate in Hz
poiss_weight = 0.37
poiss_delay = 0.2 # poisson signal delay in ms
Example #2
0
import sys
import ctypes
import neurongpu as ngpu
from random import randrange

if len(sys.argv) != 2:
    print("Usage: python %s n_neurons" % sys.argv[0])
    quit()

order = int(sys.argv[1]) // 5

ngpu.SetKernelStatus("time_resolution", 1.0)

print("Building ...")

ngpu.SetKernelStatus("rnd_seed", 1234)  # seed for GPU random numbers

n_receptors = 2

NE = 4 * order  # number of excitatory neurons
NI = 1 * order  # number of inhibitory neurons
n_neurons = NE + NI  # number of neurons in total

CE = 80  # number of excitatory synapses per neuron
CI = CE // 4  # number of inhibitory synapses per neuron

#fact=0.002
fact = 0.0055
Wex = 0.5 * fact
Win = 3.5 * fact
Example #3
0
import sys
import neurongpu as ngpu
import numpy as np
tolerance = 0.0005

E_L = -65.0

ngpu.SetKernelStatus("verbosity_level", 0)
neuron = ngpu.Create('iaf_psc_exp_hc', 1)

spike = ngpu.Create("spike_generator")
spike_times = [10.0, 400.0]
n_spikes = 2

# set spike times and height
ngpu.SetStatus(spike, {"spike_times": spike_times})
delay = [1.0, 100.0]
weight = [1.0, -2.0]

conn_spec = {"rule": "all_to_all"}

syn_spec_ex = {'weight': weight[0], 'delay': delay[0]}
syn_spec_in = {'weight': weight[1], 'delay': delay[1]}
ngpu.Connect(spike, neuron, conn_spec, syn_spec_ex)
ngpu.Connect(spike, neuron, conn_spec, syn_spec_in)

record = ngpu.CreateRecord("", ["V_m_rel"], [neuron[0]], [0])
#voltmeter = nest.Create('voltmeter')
#nest.Connect(voltmeter, neuron)

ngpu.Simulate(800.0)