Example #1
0
def save_csv(filename, dat, **kw):
    '''
    save_csv(filename, d) writes a pandas dataframe d to a CSV file with the given name. If pandas
      cannot be loaded, then an error is raised. If d is not a dataframe, to_dataframe() is called
      on it.

    All optional arguments are passed along to the pandas.DataFrame.to_csv function.
    '''
    import pandas
    from neuropythy.util import to_dataframe
    d = to_dataframe(dat)
    if any(filename.endswith(s) for s in ('.gz', '.bz2', '.lzma')):
        with gzip.open(filename, 'wt', newlines='') as fl: d.to_csv(fl, **kw)
    else:
        with open(filename, 'wt', newlines='') as fl: d.to_csv(fl, **kw)
    return data
Example #2
0
def save_tsv(filename, dat, sep='\t', **kw):
    '''
    save_tsv(filename, d) writes a pandas dataframe d to a TSV file with the given name. If pandas
      cannot be loaded, then an error is raised. If d is not a dataframe, to_dataframe() is called
      on it.

    All optional arguments are passed along to the pandas.DataFrame.to_csv function. Note that this
    function is identical to save_csv() except that it has a default sep value of '\t' instead of
    ','.
    '''
    import pandas
    from neuropythy.util import to_dataframe
    d = to_dataframe(dat)
    if any(filename.endswith(s) for s in ('.gz', '.bz2', '.lzma')):
        with gzip.open(filename, 'wt', newlines='') as fl: d.to_csv(fl, sep=sep, **kw)
    else:
        with open(filename, 'wt', newlines='') as fl: d.to_csv(fl, sep=sep, **kw)
    return data