def test_Fim_outputs():
output_map = dict(out_file=dict(), )
outputs = Fim.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_Fim_outputs():
output_map = dict(out_file=dict(),
)
outputs = Fim.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_Fim_inputs():
input_map = dict(
args=dict(argstr='%s', ),
environ=dict(
nohash=True,
usedefault=True,
),
fim_thr=dict(
argstr='-fim_thr %f',
position=3,
),
ideal_file=dict(
argstr='-ideal_file %s',
mandatory=True,
position=2,
),
ignore_exception=dict(
nohash=True,
usedefault=True,
),
in_file=dict(
argstr=' -input %s',
copyfile=False,
mandatory=True,
position=1,
),
out=dict(
argstr='-out %s',
position=4,
),
out_file=dict(
argstr='-bucket %s',
name_source='in_file',
name_template='%s_fim',
),
outputtype=dict(),
terminal_output=dict(
mandatory=True,
nohash=True,
),
)
inputs = Fim.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_Fim_inputs():
input_map = dict(ignore_exception=dict(nohash=True,
usedefault=True,
),
out_file=dict(name_source='in_file',
name_template='%s_fim',
argstr='-bucket %s',
),
args=dict(argstr='%s',
),
outputtype=dict(),
fim_thr=dict(position=3,
argstr='-fim_thr %f',
),
ideal_file=dict(position=2,
mandatory=True,
argstr='-ideal_file %s',
),
terminal_output=dict(mandatory=True,
nohash=True,
),
environ=dict(nohash=True,
usedefault=True,
),
in_file=dict(copyfile=False,
mandatory=True,
position=1,
argstr=' -input %s',
),
out=dict(position=4,
argstr='-out %s',
),
)
inputs = Fim.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value