Example #1
0
def test_Fim_outputs():
    output_map = dict(out_file=dict(), )
    outputs = Fim.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value
Example #2
0
def test_Fim_outputs():
    output_map = dict(out_file=dict(),
    )
    outputs = Fim.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value
Example #3
0
def test_Fim_inputs():
    input_map = dict(
        args=dict(argstr='%s', ),
        environ=dict(
            nohash=True,
            usedefault=True,
        ),
        fim_thr=dict(
            argstr='-fim_thr %f',
            position=3,
        ),
        ideal_file=dict(
            argstr='-ideal_file %s',
            mandatory=True,
            position=2,
        ),
        ignore_exception=dict(
            nohash=True,
            usedefault=True,
        ),
        in_file=dict(
            argstr=' -input %s',
            copyfile=False,
            mandatory=True,
            position=1,
        ),
        out=dict(
            argstr='-out %s',
            position=4,
        ),
        out_file=dict(
            argstr='-bucket %s',
            name_source='in_file',
            name_template='%s_fim',
        ),
        outputtype=dict(),
        terminal_output=dict(
            mandatory=True,
            nohash=True,
        ),
    )
    inputs = Fim.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value
Example #4
0
def test_Fim_inputs():
    input_map = dict(ignore_exception=dict(nohash=True,
    usedefault=True,
    ),
    out_file=dict(name_source='in_file',
    name_template='%s_fim',
    argstr='-bucket %s',
    ),
    args=dict(argstr='%s',
    ),
    outputtype=dict(),
    fim_thr=dict(position=3,
    argstr='-fim_thr %f',
    ),
    ideal_file=dict(position=2,
    mandatory=True,
    argstr='-ideal_file %s',
    ),
    terminal_output=dict(mandatory=True,
    nohash=True,
    ),
    environ=dict(nohash=True,
    usedefault=True,
    ),
    in_file=dict(copyfile=False,
    mandatory=True,
    position=1,
    argstr=' -input %s',
    ),
    out=dict(position=4,
    argstr='-out %s',
    ),
    )
    inputs = Fim.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value