def test_Dcm2nii_inputs():
input_map = dict(
anonymize=dict(argstr="-a", usedefault=True),
args=dict(argstr="%s"),
collapse_folders=dict(argstr="-c", usedefault=True),
config_file=dict(argstr="-b %s", genfile=True),
convert_all_pars=dict(argstr="-v", usedefault=True),
date_in_filename=dict(argstr="-d", usedefault=True),
environ=dict(nohash=True, usedefault=True),
events_in_filename=dict(argstr="-e", usedefault=True),
gzip_output=dict(argstr="-g", usedefault=True),
id_in_filename=dict(argstr="-i", usedefault=True),
ignore_exception=dict(nohash=True, usedefault=True),
nii_output=dict(argstr="-n", usedefault=True),
output_dir=dict(argstr="-o %s", genfile=True),
protocol_in_filename=dict(argstr="-p", usedefault=True),
reorient=dict(argstr="-r"),
reorient_and_crop=dict(argstr="-x", usedefault=True),
source_dir=dict(argstr="%s", mandatory=True, position=-1, xor=["source_names"]),
source_in_filename=dict(argstr="-f", usedefault=True),
source_names=dict(argstr="%s", copyfile=False, mandatory=True, position=-1, xor=["source_dir"]),
spm_analyze=dict(argstr="-s", xor=["nii_output"]),
terminal_output=dict(mandatory=True, nohash=True),
)
inputs = Dcm2nii.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_Dcm2nii_inputs():
input_map = dict(anonymize=dict(argstr='-a',
position=2,
),
args=dict(argstr='%s',
position=9,
),
config_file=dict(argstr='-b %s',
genfile=True,
position=7,
),
convert_all_pars=dict(argstr='-v',
position=8,
),
environ=dict(nohash=True,
usedefault=True,
),
gzip_output=dict(argstr='-g',
position=0,
usedefault=True,
),
id_in_filename=dict(argstr='-i',
position=3,
usedefault=True,
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
nii_output=dict(argstr='-n',
position=1,
usedefault=True,
),
output_dir=dict(argstr='-o %s',
genfile=True,
position=6,
),
reorient=dict(argstr='-r',
position=4,
),
reorient_and_crop=dict(argstr='-x',
position=5,
),
source_names=dict(argstr='%s',
copyfile=False,
mandatory=True,
position=10,
),
terminal_output=dict(mandatory=True,
nohash=True,
),
)
inputs = Dcm2nii.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_Dcm2nii_inputs():
input_map = dict(
anonymize=dict(
argstr='-a',
usedefault=True,
),
args=dict(argstr='%s', ),
collapse_folders=dict(
argstr='-c',
usedefault=True,
),
config_file=dict(
argstr='-b %s',
genfile=True,
),
convert_all_pars=dict(
argstr='-v',
usedefault=True,
),
date_in_filename=dict(
argstr='-d',
usedefault=True,
),
environ=dict(
nohash=True,
usedefault=True,
),
events_in_filename=dict(
argstr='-e',
usedefault=True,
),
gzip_output=dict(
argstr='-g',
usedefault=True,
),
id_in_filename=dict(
argstr='-i',
usedefault=True,
),
ignore_exception=dict(
nohash=True,
usedefault=True,
),
nii_output=dict(
argstr='-n',
usedefault=True,
),
output_dir=dict(
argstr='-o %s',
genfile=True,
),
protocol_in_filename=dict(
argstr='-p',
usedefault=True,
),
reorient=dict(argstr='-r', ),
reorient_and_crop=dict(
argstr='-x',
usedefault=True,
),
source_dir=dict(
argstr='%s',
mandatory=True,
position=-1,
xor=['source_names'],
),
source_in_filename=dict(
argstr='-f',
usedefault=True,
),
source_names=dict(
argstr='%s',
copyfile=False,
mandatory=True,
position=-1,
xor=['source_dir'],
),
spm_analyze=dict(
argstr='-s',
xor=['nii_output'],
),
terminal_output=dict(
mandatory=True,
nohash=True,
),
)
inputs = Dcm2nii.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_Dcm2nii_inputs():
input_map = dict(anonymize=dict(argstr='-a',
usedefault=True,
),
args=dict(argstr='%s',
),
collapse_folders=dict(argstr='-c',
usedefault=True,
),
config_file=dict(argstr='-b %s',
genfile=True,
),
convert_all_pars=dict(argstr='-v',
usedefault=True,
),
date_in_filename=dict(argstr='-d',
usedefault=True,
),
environ=dict(nohash=True,
usedefault=True,
),
events_in_filename=dict(argstr='-e',
usedefault=True,
),
gzip_output=dict(argstr='-g',
usedefault=True,
),
id_in_filename=dict(argstr='-i',
usedefault=True,
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
nii_output=dict(argstr='-n',
usedefault=True,
),
output_dir=dict(argstr='-o %s',
genfile=True,
),
protocol_in_filename=dict(argstr='-p',
usedefault=True,
),
reorient=dict(argstr='-r',
),
reorient_and_crop=dict(argstr='-x',
usedefault=True,
),
source_dir=dict(argstr='%s',
mandatory=True,
position=-1,
xor=['source_names'],
),
source_in_filename=dict(argstr='-f',
usedefault=True,
),
source_names=dict(argstr='%s',
copyfile=False,
mandatory=True,
position=-1,
xor=['source_dir'],
),
spm_analyze=dict(argstr='-s',
xor=['nii_output'],
),
terminal_output=dict(nohash=True,
),
)
inputs = Dcm2nii.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
