Example #1
0
def test_BEDPOSTX_inputs():
    input_map = dict(
        args=dict(argstr='%s', ),
        bpx_directory=dict(
            argstr='%s',
            usedefault=True,
        ),
        burn_period=dict(argstr='-b %d', ),
        bvals=dict(mandatory=True, ),
        bvecs=dict(mandatory=True, ),
        dwi=dict(mandatory=True, ),
        environ=dict(
            nohash=True,
            usedefault=True,
        ),
        fibres=dict(argstr='-n %d', ),
        ignore_exception=dict(
            nohash=True,
            usedefault=True,
        ),
        jumps=dict(argstr='-j %d', ),
        mask=dict(mandatory=True, ),
        output_type=dict(),
        sampling=dict(argstr='-s %d', ),
        terminal_output=dict(
            mandatory=True,
            nohash=True,
        ),
        weight=dict(argstr='-w %.2f', ),
    )
    inputs = BEDPOSTX.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value
Example #2
0
def test_BEDPOSTX_outputs():
    output_map = dict(bpx_out_directory=dict(),
    dyads=dict(),
    mean_fsamples=dict(),
    mean_phsamples=dict(),
    mean_thsamples=dict(),
    merged_fsamples=dict(),
    merged_phsamples=dict(),
    merged_thsamples=dict(),
    xfms_directory=dict(),
    )
    outputs = BEDPOSTX.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value
Example #3
0
def test_BEDPOSTX_outputs():
    output_map = dict(
        bpx_out_directory=dict(),
        dyads=dict(),
        mean_fsamples=dict(),
        mean_phsamples=dict(),
        mean_thsamples=dict(),
        merged_fsamples=dict(),
        merged_phsamples=dict(),
        merged_thsamples=dict(),
        xfms_directory=dict(),
    )
    outputs = BEDPOSTX.output_spec()

    for key, metadata in output_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(outputs.traits()[key], metakey), value
Example #4
0
def test_BEDPOSTX_inputs():
    input_map = dict(args=dict(argstr='%s',
    ),
    bpx_directory=dict(argstr='%s',
    usedefault=True,
    ),
    burn_period=dict(argstr='-b %d',
    ),
    bvals=dict(mandatory=True,
    ),
    bvecs=dict(mandatory=True,
    ),
    dwi=dict(mandatory=True,
    ),
    environ=dict(nohash=True,
    usedefault=True,
    ),
    fibres=dict(argstr='-n %d',
    ),
    ignore_exception=dict(nohash=True,
    usedefault=True,
    ),
    jumps=dict(argstr='-j %d',
    ),
    mask=dict(mandatory=True,
    ),
    output_type=dict(),
    sampling=dict(argstr='-s %d',
    ),
    terminal_output=dict(mandatory=True,
    nohash=True,
    ),
    weight=dict(argstr='-w %.2f',
    ),
    )
    inputs = BEDPOSTX.input_spec()

    for key, metadata in input_map.items():
        for metakey, value in metadata.items():
            yield assert_equal, getattr(inputs.traits()[key], metakey), value