Example #1
0
# Setting up the second level analysis model node
level2design = Node(fsl.MultipleRegressDesign(contrasts=contrastList,
                                              regressors=dictReg),
                    name='level2design')

dofCalc = Node(interface=Function(input_names=['targetDir', 'desMtx'],
                                  output_names=['fileOut'],
                                  function=DOFCalc),
               name='dofCalc')

# creating datasink to collect outputs
datasink = Node(
    DataSink(base_directory=os.path.join(outDir, 'DOFCalculation')),
    name='datasink')

# directory where we create a DOF file
DOFCalc.inputs.targetDir = datasink.inputs.base_directory
# passing on the design matrix to the DOF calculation file
DOFCalc.inputs.desMtx = dictReg

# passing

# creating the workflow
dofCalc = Workflow(name="dofCalc", base_dir=outDir)

# connecting nodes
dofCalc.connect(DOFCalc, 'fileOut', datasink, 'fileOut')

# running the workflow
dofCalc.run()