Python rft Examples

Example #1

File: to_fix.py Project: scollis/nmrglue

pipe.write("fsh2.glue", d, a, overwrite=True)

d, a = pipe.read("1D_freq_real.dat")
d, a = p.fsh(d, a, dir="rs", pts=6.7)
pipe.write("fsh3.glue", d, a, overwrite=True)

# this fails because NMRPipe performs a Hilbert transform? If this is true it
# should be moved to the known_fail.py script.
d, a = pipe.read("1D_freq_complex.dat")
d, a = p.fsh(d, a, dir="ls", pts=9.5)
pipe.write("fsh4.glue", d, a, overwrite=True)

# RFT
# these are off by small amounts, mostly min/max values
d, a = pipe.read("1D_freq_complex.dat")
d, a = p.rft(d, a)
pipe.write("rft9.glue", d, a, overwrite=True)

d, a = pipe.read("1D_freq_real.dat")
d, a = p.rft(d, a)
pipe.write("rft10.glue", d, a, overwrite=True)

d, a = pipe.read("freq_real.ft2")
d, a = p.rft(d, a)
pipe.write("rft11.glue", d, a, overwrite=True)

# HT
# ps90-180 mode doesn't match
d, a = pipe.read("1D_freq_real.dat")
d, a = p.ht(d, a, mode="ps90-180")
pipe.write("ht4.glue", d, a, overwrite=True)

Example #2

File: to_fix.py Project: ericbreynaert/nmrglue

pipe.write("fsh2.glue", d, a, overwrite=True)

d, a = pipe.read("1D_freq_real.dat")
d, a = p.fsh(d, a, dir="rs", pts=6.7)
pipe.write("fsh3.glue", d, a, overwrite=True)

# this fails because NMRPipe performs a Hilbert transform? If this is true it
# should be moved to the known_fail.py script.
d, a = pipe.read("1D_freq_complex.dat")
d, a = p.fsh(d, a, dir="ls", pts=9.5)
pipe.write("fsh4.glue", d, a, overwrite=True)

# RFT
# these are off by small amounts, mostly min/max values
d, a = pipe.read("1D_freq_complex.dat")
d, a = p.rft(d, a)
pipe.write("rft9.glue", d, a, overwrite=True)

d, a = pipe.read("1D_freq_real.dat")
d, a = p.rft(d, a)
pipe.write("rft10.glue", d, a, overwrite=True)

d, a = pipe.read("freq_real.ft2")
d, a = p.rft(d, a)
pipe.write("rft11.glue", d, a, overwrite=True)

# HT
# ps90-180 mode doesn't match
d, a = pipe.read("1D_freq_real.dat")
d, a = p.ht(d, a, mode="ps90-180")
pipe.write("ht4.glue", d, a, overwrite=True)

Example #3

#! /usr/bin/env python

import nmrglue.fileio.pipe as pipe
import nmrglue.process.pipe_proc as p
import shutil

d, a = pipe.read("1D_time_real.fid")
d, a = p.rft(d, a)
pipe.write("rft1.glue", d, a, overwrite=True)

d, a = pipe.read("1D_time.fid")
d, a = p.rft(d, a)
pipe.write("rft2.glue", d, a, overwrite=True)

d, a = pipe.read("time_real.fid")
d, a = p.rft(d, a)
pipe.write("rft3.glue", d, a, overwrite=True)

d, a = pipe.read("time_complex.fid")
d, a = p.rft(d, a)
pipe.write("rft4.glue", d, a, overwrite=True)

d, a = pipe.read("1D_time_real.fid")
d, a = p.rft(d, a, inv=True)
pipe.write("rft5.glue", d, a, overwrite=True)

d, a = pipe.read("1D_time.fid")
d, a = p.rft(d, a, inv=True)
pipe.write("rft6.glue", d, a, overwrite=True)

d, a = pipe.read("time_real.fid")

Example #4

File: rft.py Project: rpbarnes/nmrglue

#! /usr/bin/env python

import nmrglue.fileio.pipe as pipe
import nmrglue.process.pipe_proc as p
import shutil

d,a = pipe.read("1D_time_real.fid")
d,a = p.rft(d,a)
pipe.write("rft1.glue",d,a,overwrite=True)

d,a = pipe.read("1D_time.fid")
d,a = p.rft(d,a)
pipe.write("rft2.glue",d,a,overwrite=True)

d,a = pipe.read("time_real.fid")
d,a = p.rft(d,a)
pipe.write("rft3.glue",d,a,overwrite=True)

d,a = pipe.read("time_complex.fid")
d,a = p.rft(d,a)
pipe.write("rft4.glue",d,a,overwrite=True)

d,a = pipe.read("1D_time_real.fid")
d,a = p.rft(d,a,inv=True)
pipe.write("rft5.glue",d,a,overwrite=True)

d,a = pipe.read("1D_time.fid")
d,a = p.rft(d,a,inv=True)
pipe.write("rft6.glue",d,a,overwrite=True)

d,a = pipe.read("time_real.fid")