def spec_url(request, url):
validate = URLValidator()
try:
validate(url)
# TODO: download url to tempfile
except ValidationError:
if media_root is None:
raise NoNMRDataError('The path supplied has no NMR spectra: %s' %url)
abs_url = os.path.abspath(os.path.join(media_root, url))
if abs_url[:len(media_root)] != media_root:
raise NoNMRDataError('Permission denied to access this url: %s' %url)
specs = fromFile(abs_url)
if isinstance(specs, NMRSpectrum):
specs = [specs]
registerSpecs(request, specs)
return specs
def setUp(self):
spec1d = fromFile('./test_files/Bruker_1D/', 'Bruker')
self.spec1d = spec1d
self.fid_file = './test_files/bmse000281_hsqc.fid'
def setUp(self):
spec1d = fromFile('./test_files/Bruker_1D/', 'Bruker')
ds = NMRDataset(1, spec1d, spec1d, spec1d)
self.ds = ds
self.spec1d = spec1d
self.fid_file = './test_files/bmse000281_hsqc.fid'
def setUp(self):
spec1d = fromFile('./test_files/Bruker_1D/', 'Bruker')
self.spec1d = spec1d
self.fid_file = './test_files/bmse000281_hsqc.fid'
def setUp(self):
spec1d = fromFile('./test_files/Bruker_1D/', 'Bruker')
ds = NMRDataset(1, spec1d, spec1d, spec1d)
self.ds = ds
self.spec1d = spec1d
self.fid_file = './test_files/bmse000281_hsqc.fid'
def coffees_test(request):
import os.path
abs_url = os.path.join(os.path.dirname(__file__), 'static/nmrpro/demo.tar.gz')
specs = fromFile(abs_url)
registerSpecs(request, specs)
return specs