def calculate_Tex(self, result_sv, *args):
tau, etau, status1 = Misc().get_par_from_sv_werr(args[0])
tr, etr, status2 = Misc().get_par_from_sv_werr(args[1])
nu, status3 = Misc().get_par_from_sv_nerr(args[2])
status = [status1, status2, status3]
if -1 in status:
result_sv.set("ERROR!")
else:
tex, etex = nl.calc_tex(tau, etau, tr, etr, 1e9 * nu)
result_sv.set("{0:.2f} +- {1:.2f}".format(tex, etex))
import argparse
import auxiliary as aux
import numlte as nl
import pyfi as fh
### Fix description
parser = argparse.ArgumentParser(
description="Calculates Column Densities from one input file with molecular and brightness information"
)
parser.add_argument("infile", type=str, help="Input file")
parser.add_argument("outfile", type=str, help="Output file")
args = parser.parse_args()
filein = open(args.infile, "r")
fileaslist = fh.strip_off_comm(filein, "#")
filein.close()
values = fh.float_file(fileaslist, skip=[0, 1, 2])
fileout = open(args.outfile, "w") # real option
aux.writeInfo(fileout, "MiniTex")
fileout.write(
"#Source[1] Molecule[2] Transition[3] Frequency(GHz)[4] Opacity[5] sig(Opacity)[6] Intensity(K)[7] sig(intensity)(K)[8] Exc. Temp.(K)[9] sig(Exc. temp.)(K)[10]"
)
for i in range(len(values)):
value = values[i]
line = fileaslist[i]
results = nl.calc_tex(value[1], value[2], value[3], value[4], value[0])
fileout.write(line[:-1] + "\t{0:.4f}\t{1:.4f}\n".format(results[0], results[1]))
fileout.close()