Example #1
0
 def test_load_from_disk(self):
     # Generate a tmp fake data structure
     img_per_cat = {2: range(1, 10), 8: range(30, 40), 111: range(6, 15)}
     path, _ = create_tmp_structure(img_per_cat)
     l = loader.LoadFromDisk(impath=path)
     for cat in img_per_cat.keys():
         for image in img_per_cat[cat]:
             l.get_image(cat, image)
             self.assertTrue(l.test_for_category(cat))
             self.assertTrue(l.test_for_image(cat, image))
     # Test checks for non existing images
     no_img_per_cat = {0: range(1, 10), 7: range(30, 40), 110: range(6, 15)}
     for cat in no_img_per_cat.keys():
         for image in no_img_per_cat[cat]:
             self.assertTrue(not l.test_for_category(cat))
             self.assertTrue(not l.test_for_image(cat, image))
     no_img_per_cat = {
         2: range(11, 20),
         8: range(20, 30),
         111: range(16, 40)
     }
     for cat in no_img_per_cat.keys():
         for image in no_img_per_cat[cat]:
             self.assertTrue(not l.test_for_image(cat, image))
     rm_tmp_structure(path)
Example #2
0
 def test_save_to_disk(self):
     path = mkdtemp()
     ftrpath = mkdtemp()
     im_tmp = np.ones((100, 100))
     l = loader.SaveToDisk(impath=path, ftrpath=ftrpath, size=(10, 10))
     # Generate a tmp fake data structure
     img_per_cat = {
         2: list(range(1, 10)),
         8: list(range(30, 40)),
         111: list(range(6, 15))
     }
     for cat in list(img_per_cat.keys()):
         # Create category dir
         for image in img_per_cat[cat]:
             l.save_image(cat, image, im_tmp)
             for f in ['a', 'b']:
                 l.save_feature(cat, image, f, np.ones((10, 10)))
     l = loader.LoadFromDisk(impath=path, ftrpath=ftrpath, size=(10, 10))
     for cat in list(img_per_cat.keys()):
         for image in img_per_cat[cat]:
             im = l.get_image(cat, image)
             self.assertTrue(im.shape[0] == 10 and im.shape[1] == 10)
             self.assertTrue(l.test_for_category(cat))
             self.assertTrue(l.test_for_image(cat, image))
             self.assertTrue(l.test_for_feature(cat, image, 'a'), True)
     os.system('rm -rf %s' % path)
     os.system('rm -rf %s' % ftrpath)
Example #3
0
 def test_load_from_disk_scaling(self):
     # Generate a tmp fake data structure
     img_per_cat = {2: range(1, 10), 8: range(30, 40), 111: range(6, 15)}
     path, _ = create_tmp_structure(img_per_cat)
     l = loader.LoadFromDisk(impath=path, size=(10, 10))
     for cat in img_per_cat.keys():
         for image in img_per_cat[cat]:
             im = l.get_image(cat, image)
             self.assertTrue(im.shape[0] == 10 and im.shape[1] == 10)
             self.assertTrue(l.test_for_category(cat))
             self.assertTrue(l.test_for_image(cat, image))
     rm_tmp_structure(path)
Example #4
0
    def test_getattr(self):
        # Test the
        # Set up a fake dir structure to generate an aligned fixmat
        img_per_cat = {1: range(1, 11), 2: range(1, 11)}
        features = ['a', 'b']
        path, ftrpath = test_loader.create_tmp_structure(img_per_cat,
                                                         features=features)
        l = loader.LoadFromDisk(impath=path, ftrpath=ftrpath, size=(100, 100))
        inp = stimuli.Categories(l, img_per_cat, features)
        fm = fixmat.TestFixmatFactory(categories=[1, 2],
                                      filenumbers=range(1, 11),
                                      subjectindices=[1, 2, 3, 4, 5, 6],
                                      params={
                                          'pixels_per_degree': 10,
                                          'image_size': [100, 100]
                                      },
                                      categories_obj=inp)

        fm_err = fixmat.TestFixmatFactory(categories=[1, 2],
                                          filenumbers=range(1, 11),
                                          subjectindices=[1, 2, 3, 4, 5, 6],
                                          params={
                                              'pixels_per_degree': 10,
                                              'image_size': [100, 100]
                                          })

        # Now let's check if we can access all the images
        # and all the features.
        fm.add_feature_values(['a', 'b'])
        self.assertRaises(RuntimeError,
                          lambda: fm_err.add_feature_values(['a', 'b']))
        for cat_mat, cat_inp in fm.by_cat():
            self.assertEquals(cat_mat.category[0], cat_inp.category)
            for img_mat, img_inp in cat_mat.by_filenumber():
                self.assertEquals(img_mat.filenumber[0], img_inp.image)
        self.assertEquals(len(fm.a), len(fm.x))
        self.assertEquals(len(fm.b), len(fm.x))
        # Let's also check if make_reg_data works
        a, b = fm.make_reg_data(features)
        self.assertEquals(a.shape[1], len(fm.x))
        self.assertEquals(a.shape[0], len(features))
        self.assertEquals(b.shape[1], len(fm.x))
        self.assertEquals(b.shape[0], len(features))
        self.assertEquals(b.sum(), a.sum())
        a, b = fm.make_reg_data(features, all_controls=True)
        self.assertEquals(a.shape[1], len(fm.x))
        self.assertEquals(a.shape[0], len(features))
        self.assertEquals(b.shape[1], len(fm.x))
        self.assertEquals(b.shape[0], len(features))
        self.assertEquals(b.sum(), a.sum())
        test_loader.rm_tmp_structure(path)
        test_loader.rm_tmp_structure(ftrpath)
Example #5
0
    def test_directory_stimuli_factory(self):
        img_per_cat = {1: range(1, 11), 2: range(1, 11)}
        features = ['a', 'b']
        path, ftrpath = test_loader.create_tmp_structure(img_per_cat,
                                                         features=features)
        l = loader.LoadFromDisk(impath=path, ftrpath=ftrpath, size=(100, 100))
        inp = stimuli.DirectoryStimuliFactory(l)
        for cat in img_per_cat.keys():
            inp[cat]
            for img in img_per_cat[cat]:
                inp[cat][img]
                inp[cat][img]['a']
                inp[cat][img].data

        test_loader.rm_tmp_structure(path)
        test_loader.rm_tmp_structure(ftrpath)