def test_find_plugins(self):
""" Test that find_plugins can find plugin modules"""
paths = plugin.find_plugins()
if not paths:
# A typical reason for this to fail is that no plugin are installed
hf = get_home_folder()
upath = os.path.join(hf, u".local/share/odemis/plugins")
if not os.path.isdir(upath) or not os.listdir(upath):
self.fail(
"Please install at least one plugin in ~/.local/share/odemis/plugins"
)
self.assertGreater(len(paths), 0)
def init_gui(self):
""" This method binds events to menu items and initializes GUI controls """
try:
# Add frame icon
ib = wx.IconBundle()
ib.AddIcon(gui.icon)
self.main_frame.SetIcons(ib)
self.main_frame.SetTitle(gui.name)
# IMPORTANT NOTE:
# As all tab panels are hidden on start-up, the MinSize attribute
# of the main GUI frame will be set to such a low value that most of
# the interface will be invisible if the user takes the interface out of
# 'full screen' view.
# Also, Gnome's GDK library will start spewing error messages, saying
# it cannot draw certain images, because the dimensions are 0x0.
self.main_frame.SetMinSize((1000, 550))
self.main_frame.Maximize() # must be done before Show()
# List of all possible tabs used in Odemis' main GUI
tab_defs = [
{
# Unique name of the tab
"name": "secom_live",
# Tab controller for this tab
"controller": tabs.SecomStreamsTab,
# Tab button for this tab
"button": self.main_frame.btn_tab_secom_streams,
# Constructor of the tab panel
"panel": main_xrc.xrcpnl_tab_secom_streams
},
{
"name": "cryosecom-localization",
"controller": tabs.LocalizationTab,
"button": self.main_frame.btn_tab_localization,
"panel": main_xrc.xrcpnl_tab_localization
},
{
"name": "secom_align",
"controller": tabs.SecomAlignTab,
"button": self.main_frame.btn_tab_align,
"panel": main_xrc.xrcpnl_tab_secom_align
},
{
"name": "sparc_align",
"controller": tabs.SparcAlignTab,
"button": self.main_frame.btn_tab_align,
"panel": main_xrc.xrcpnl_tab_sparc_align
},
{
"name": "sparc2_align",
"controller": tabs.Sparc2AlignTab,
"button": self.main_frame.btn_tab_align,
"panel": main_xrc.xrcpnl_tab_sparc2_align
},
{
"name": "sparc_acqui",
"controller": tabs.SparcAcquisitionTab,
"button": self.main_frame.btn_tab_sparc_acqui,
"panel": main_xrc.xrcpnl_tab_sparc_acqui
},
{
"name": "fastem_overview",
"controller": tabs.FastEMOverviewTab,
"button": self.main_frame.btn_tab_fastem_overview,
"panel": main_xrc.xrcpnl_tab_fastem_overview
},
{
"name": "fastem_acqui",
"controller": tabs.FastEMAcquisitionTab,
"button": self.main_frame.btn_tab_fastem_acqui,
"panel": main_xrc.xrcpnl_tab_fastem_acqui
},
{"name": "fastem_chamber",
"controller": tabs.FastEMChamberTab,
"button": self.main_frame.btn_tab_sparc_chamber,
"panel": main_xrc.xrcpnl_tab_fastem_chamber
},
{
"name": "sparc_chamber",
"controller": tabs.ChamberTab,
"button": self.main_frame.btn_tab_sparc_chamber,
"panel": main_xrc.xrcpnl_tab_sparc_chamber
},
{
"name": "cryosecom_chamber",
"controller": tabs.CryoChamberTab,
"button": self.main_frame.btn_tab_cryosecom_chamber,
"panel": main_xrc.xrcpnl_tab_cryosecom_chamber
},
{
"name": "analysis",
"controller": tabs.AnalysisTab,
"button": self.main_frame.btn_tab_inspection,
"panel": main_xrc.xrcpnl_tab_inspection
},
]
# Create the main tab controller and store a global reference
# in the odemis.gui.cont package
self.tab_controller = tabs.TabBarController(tab_defs, self.main_frame, self.main_data)
# Connect the log panel button of each tab
def toggle_log_panel(_):
self.main_data.debug.value = not self.main_frame.pnl_log.IsShown()
for tab in self.tab_controller.get_tabs():
if hasattr(tab.panel, 'btn_log'):
tab.panel.btn_log.Bind(wx.EVT_BUTTON, toggle_log_panel)
self.main_frame.btn_log.Bind(wx.EVT_BUTTON, toggle_log_panel)
self.main_data.debug.subscribe(self.on_debug_va, init=True)
self.main_data.level.subscribe(self.on_level_va, init=True)
log.create_gui_logger(self.main_frame.txt_log, self.main_data.debug, self.main_data.level)
self._menu_controller = MenuController(self.main_data, self.main_frame)
# Menu events
self.main_frame.Bind(wx.EVT_MENU, self.on_close_window, id=self.main_frame.menu_item_quit.GetId())
self.main_frame.Bind(wx.EVT_CLOSE, self.on_close_window)
# To handle "Save snapshot" menu
self._snapshot_controller = acquisition.SnapshotController(self.main_data,
self.main_frame)
# Update the logo if a non-default logo is defined
if gui.logo:
self.main_frame.logo.SetBitmap(gui.logo)
# Update legend logo filepath
self.main_frame.legend_logo = gui.legend_logo
# Now starts the plugins, after the rest of the GUI is ready
pfns = plugin.find_plugins()
for p in pfns:
pis = plugin.load_plugin(p, self.main_data.microscope, self)
self.plugins.extend(pis)
# add temperature controller
if self.main_data.sample_thermostat:
self._temperature_controller = TemperatureController(self.main_frame, self.main_data.sample_thermostat)
# making it very late seems to make it smoother
wx.CallAfter(self.main_frame.Show)
except Exception:
self.excepthook(*sys.exc_info())
# Re-raise the exception, so the program will exit. If this is not
# done and exception will prevent the GUI from being shown, while
# the program keeps running in the background.
raise
def test_find_plugins(self):
""" Test that find_plugins can find plugin modules"""
paths = plugin.find_plugins()
self.assertGreater(len(paths), 0)
def test_find_plugins(self):
""" Test that find_plugins can find plugin modules"""
paths = plugin.find_plugins()
self.assertGreater(len(paths), 0)
def init_gui(self):
""" This method binds events to menu items and initializes GUI controls """
try:
# Add frame icon
ib = wx.IconBundle()
ib.AddIcon(gui.icon)
self.main_frame.SetIcons(ib)
self.main_frame.SetTitle(gui.name)
# IMPORTANT NOTE:
# As all tab panels are hidden on start-up, the MinSize attribute
# of the main GUI frame will be set to such a low value that most of
# the interface will be invisible if the user takes the interface out of
# 'full screen' view.
# Also, Gnome's GDK library will start spewing error messages, saying
# it cannot draw certain images, because the dimensions are 0x0.
self.main_frame.SetMinSize((1280, 550))
self.main_frame.Maximize() # must be done before Show()
# List of all possible tabs used in Odemis' main GUI
# TODO: instead of roles + label, have a class method on each
# StreamTab class that takes the microscope as input, and return a
# label or None if it shouldn't be displayed. (+ a "priority" to
# decide which one is the default?)
tab_defs = [
{
# Unique name of the tab
"name": "secom_live",
# Tab controller for this tab
"controller": tabs.SecomStreamsTab,
# Tab button for this tab
"button": self.main_frame.btn_tab_secom_streams,
# Constructor of the tab panel
"panel": main_xrc.xrcpnl_tab_secom_streams
},
{
"name": "secom_align",
"controller": tabs.SecomAlignTab,
"button": self.main_frame.btn_tab_secom_align,
"panel": main_xrc.xrcpnl_tab_secom_align
},
{
"name": "sparc_align",
"controller": tabs.SparcAlignTab,
"button": self.main_frame.btn_tab_sparc_align,
"panel": main_xrc.xrcpnl_tab_sparc_align
},
{
"name": "sparc2_align",
"controller": tabs.Sparc2AlignTab,
"button": self.main_frame.btn_tab_sparc2_align,
"panel": main_xrc.xrcpnl_tab_sparc2_align
},
{
"name": "sparc_acqui",
"controller": tabs.SparcAcquisitionTab,
"button": self.main_frame.btn_tab_sparc_acqui,
"panel": main_xrc.xrcpnl_tab_sparc_acqui
},
{
"name": "sparc_chamber",
"controller": tabs.ChamberTab,
"button": self.main_frame.btn_tab_sparc_chamber,
"panel": main_xrc.xrcpnl_tab_sparc_chamber
},
{
"name": "analysis",
"controller": tabs.AnalysisTab,
"button": self.main_frame.btn_tab_inspection,
"panel": main_xrc.xrcpnl_tab_inspection
},
]
# Create the main tab controller and store a global reference
# in the odemis.gui.cont package
self.tab_controller = tabs.TabBarController(tab_defs, self.main_frame, self.main_data)
# Connect the log panel button of each tab
def toggle_log_panel(_):
self.main_data.debug.value = not self.main_frame.pnl_log.IsShown()
for tab in self.tab_controller.get_tabs():
if hasattr(tab.panel, 'btn_log'):
tab.panel.btn_log.Bind(wx.EVT_BUTTON, toggle_log_panel)
self.main_frame.btn_log.Bind(wx.EVT_BUTTON, toggle_log_panel)
self.main_data.debug.subscribe(self.on_debug_va, init=True)
self.main_data.level.subscribe(self.on_level_va, init=True)
log.create_gui_logger(self.main_frame.txt_log, self.main_data.debug, self.main_data.level)
self._menu_controller = MenuController(self.main_data, self.main_frame)
# Menu events
self.main_frame.Bind(wx.EVT_MENU, self.on_close_window, id=self.main_frame.menu_item_quit.GetId())
self.main_frame.Bind(wx.EVT_CLOSE, self.on_close_window)
# To handle "Save snapshot" menu
self._snapshot_controller = acquisition.SnapshotController(self.main_data,
self.main_frame)
# Update the logo if a non-default logo is defined
if gui.logo:
self.main_frame.logo.SetBitmap(gui.logo)
# Update legend logo filepath
self.main_frame.legend_logo = gui.legend_logo
# Now starts the plugins, after the rest of the GUI is ready
pfns = plugin.find_plugins()
for p in pfns:
pis = plugin.load_plugin(p, self.main_data.microscope, self)
self.plugins.extend(pis)
# making it very late seems to make it smoother
wx.CallAfter(self.main_frame.Show)
except Exception:
self.excepthook(*sys.exc_info())
# Re-raise the exception, so the program will exit. If this is not
# done and exception will prevent the GUI from being shown, while
# the program keeps running in the background.
raise