def test_with_apostrophe(self):
        catalog_path = os.path.join(resource_dir, "disease_catalog.csv")
        target = DiseasesCatalog(catalog_path)
        target.initialize()
        expected_dict = {
            "angiosarcoma": "DOID:0001816",
            "ANGIOSARCOMA": "DOID:0001816",
            "Angiosarcoma": "DOID:0001816",
            "hemangiosarcoma foo": "DOID:0001816",
            "Hemangiosarcoma foo": "DOID:0001816",
            "Hemangiosarcoma Foo": "DOID:0001816",
            "HEMANGIOSARCOMA FOO": "DOID:0001816",
            "pterygium": "DOID:0002116",
            "PTERYGIUM": "DOID:0002116",
            "crohns disease": "DOID:0002116",
            "Crohns Disease": "DOID:0002116",
            "CROHNS DISEASE": "DOID:0002116",
            "Crohns disease": "DOID:0002116",

        }
        self.assertCountEqual(target.disease_dictionary, expected_dict)

        test_sentence = "Recent study showed that Hemangiosarcoma Foo and Crohn's disease both are really bad stuff"
        actual_found = target.find(test_sentence)
        expected_found = [Entity("Hemangiosarcoma Foo", "DOID0001816", DISEASE_TAG),
                          Entity("Crohns disease", "DOID0002116", DISEASE_TAG)]

        self.assertCountEqual(actual_found.entities, expected_found)
    # dbpedia_food_catalog = DbpediaFoodCatalog(dbpedia_food_file_path)
    # dbpedia_food_catalog.initialize()

    mixed_food_catalog = MixedFoodCatalog(mixed_food_file_path)
    mixed_food_catalog.initialize()

    all_bacteria_catalog = AllBacteriaCatalog(all_catalog_file_path)
    all_bacteria_catalog.initialize()

    gut_bacteria_catalog = GutBacteriaCatalog(gut_catalog_file_path, all_bacteria_catalog)
    gut_bacteria_catalog.initialize()

    # nutrients_catalog = NutrientsCatalogNikogosov(path=nutrients_file_path)
    # nutrients_catalog.initialize()

    diseases_catalog = DiseasesCatalog(diseases_csv_path=diseases_csv_path)
    diseases_catalog.initialize()

    prebiotics_catalog = PrebioticsCatalog(prebiotics_file_path)
    prebiotics_catalog.initialize()

    diets_catalog = DietsCatalog(diets_file_path)
    diets_catalog.initialize()

    spacy_sentence_parser = SpacySentenceParser()
    do_nothing_parser = DoNothingParser()

    do_nothing_analyzer = DoNothingSentenceAnalyzer()
    analyzer = SentenceAnalyzer()

    tags_required = [BACTERIA_TAG]