def cutout(member, object_name, image, ra, dec, radius, ra_rate, dec_rate):
global vos_dir
if member == 'none':
vos_dir = '{}/nofamily'.format(_VOS_PATH) #Planned to sort stamps on VOS into groups, but this didn't happen and so currently everything will be saved to /hasfamily
else:
vos_dir = '{}/hasfamily'.format(_VOS_PATH)
radius = radius * units.deg
expnum = image.strip('p') # only use processed images
target = storage.get_uri(expnum)
coord = SkyCoord(unit="deg", ra=ra, dec=dec)
hdulist = storage.ra_dec_cutout(target, coord, radius)
hdulist[0].header['OBJNUM'] = (object_name,'object') #Put image info into header for later use
hdulist[0].header['RA'] = (ra,'degrees')
hdulist[0].header['DEC'] = (dec,'degrees')
hdulist[0].header['RARATE'] = (ra_rate,'arcsec/hr')
hdulist[0].header['DECRATE'] = (dec_rate,'arcsec/hr')
postage_stamp_filename = "{}_{}_{:8f}_{:8f}.fits".format(object_name, image, float(ra), float(dec))
print postage_stamp_filename
hdulist.writeto("{}/{}".format(_STAMPS_DIR, postage_stamp_filename), output_verify='warn', clobber=True)
del hdulist
try:
storage.copy('{}/{}'.format(_STAMPS_DIR, postage_stamp_filename),
'{}/{}'.format(vos_dir, postage_stamp_filename))
except Exception, e:
print e
def test_get_cutout(self):
uri = "vos:jkavelaars/2001_QT297/FORS2.2013-06-15T08:18:06.831/FORS2.2013-06-15T08:18:06.831.fits"
ra = 340.20001892 * units.degree
dec = -6.82226166 * units.degree
coo = SkyCoord(ra, dec)
radius = 10.0 * units.arcminute
hdulist = storage.ra_dec_cutout(uri, coo, radius)
self.assertIsInstance(hdulist, fits.HDUList)
self.assertTrue(len(hdulist) > 1)
for hdu in hdulist[1:]:
self.assertTrue(hdu.header.get("XOFFSET", False) is not False)
def test_get_cutout(self):
uri = "vos:jkavelaars/2001_QT297/FORS2.2013-06-15T08:18:06.831/FORS2.2013-06-15T08:18:06.831.fits"
ra = 340.20001892 * units.degree
dec = -6.82226166 * units.degree
coo = SkyCoord(ra, dec)
radius = 10.0 * units.arcminute
hdulist = storage.ra_dec_cutout(uri, coo, radius)
self.assertIsInstance(hdulist, fits.HDUList)
self.assertTrue(len(hdulist) > 1)
for hdu in hdulist[1:]:
self.assertTrue(hdu.header.get("XOFFSET", False) is not False)
def cutout(obj, obj_dir, radius):
cutout_listing = storage.listdir(obj_dir, force=True)
for obs in obj.mpc_observations:
if obs.null_observation:
logging.debug('skipping: {}'.format(obs))
continue
if obs.date > parameters.SURVEY_START:
# can't make postage stamps of earlier linkages
# can't parse for an obs.comment's exposure number if no
# obs.comment exists
try:
parts = storage.frame2expnum(obs.comment.frame)
except Exception as ex:
logging.warning(f"Skipping: {obs}")
logging.debug(f"Failed to map comment.frame to expnum: {ex}")
continue
uri = storage.get_uri(parts['expnum'], version=parts['version'])
sky_coord = obs.coordinate
# Using the WCS rather than the X/Y
# (X/Y can be unreliable over the whole survey)
postage_stamp_filename = f"{obj.provisional_name}_" \
f"{obs.date.mjd:11.5f}_" \
f"{obs.coordinate.ra.degree:09.5f}_" \
f"{obs.coordinate.dec.degeee:09.5f}.fits"
if postage_stamp_filename in cutout_listing:
# skipping existing cutouts
continue
# ast_header = storage._get_sghead(parts['expnum'])
while True:
try:
hdulist = storage.ra_dec_cutout(uri, sky_coord, radius, update_wcs=True)
with open(postage_stamp_filename, 'w') as tmp_file:
hdulist.writeto(tmp_file, overwrite=True, output_verify='fix+ignore')
storage.copy(postage_stamp_filename, obj_dir + "/" + postage_stamp_filename)
os.unlink \
(postage_stamp_filename) # easier not to have them hanging around
except OSError as e: # occasionally the node is not found: report and move on for later cleanup
logging.error("OSError: -> " +str(e))
except Exception as e:
logging.error("Exception: -> " +str(e))
continue
break
def cutout(obj, obj_dir, radius):
cutout_listing = storage.listdir(obj_dir, force=True)
for obs in obj.mpc_observations:
if obs.null_observation:
logging.debug('skipping: {}'.format(obs))
continue
if obs.date > parameters.SURVEY_START: # can't make postage stamps of earlier linkages
# can't parse for an obs.comment's exposure number if no obs.comment exists
try:
parts = storage.frame2expnum(obs.comment.frame)
except Exception as ex:
logging.error("Skipping: {}\nFailed to map comment.frame to expnum: {}".format(obs, ex))
continue
uri = storage.get_uri(parts['expnum'], version=parts['version'])
sky_coord = obs.coordinate # Using the WCS rather than the X/Y (X/Y can be unreliable over the whole survey)
postage_stamp_filename = "{}_{:11.5f}_{:09.5f}_{:+09.5f}.fits".format(obj.provisional_name,
obs.date.mjd,
obs.coordinate.ra.degree,
obs.coordinate.dec.degree)
if postage_stamp_filename in cutout_listing:
# skipping existing cutouts
continue
# ast_header = storage._get_sghead(parts['expnum'])
while True:
try:
hdulist = storage.ra_dec_cutout(uri, sky_coord, radius, update_wcs=True)
with open(postage_stamp_filename, 'w') as tmp_file:
hdulist.writeto(tmp_file, overwrite=True, output_verify='fix+ignore')
storage.copy(postage_stamp_filename, obj_dir + "/" + postage_stamp_filename)
os.unlink(postage_stamp_filename) # easier not to have them hanging around
except OSError as e: # occasionally the node is not found: report and move on for later cleanup
logging.error("OSError: ->"+str(e))
except Exception as e:
logging.error("Exception: ->"+str(e))
continue
break
def cutout(obj, obj_dir, radius):
print(len([n for n in obj.mpc_observations if not n.null_observation]))
for obs in obj.mpc_observations:
print('starting analysis of {}'.format(str(obs)))
if obs.null_observation:
print('skipping')
continue
if obs.date > parameters.SURVEY_START: # can't make postage stamps of earlier linkages
# can't parse for an obs.comment's exposure number if no obs.comment exists
try:
expnum = obs.comment.frame.split('p')[0].strip(' ') # only want calibrated images
except AttributeError, e:
print('No comment in this MPC line!')
continue
if not expnum.isdigit():
print('expnum {} parsed from comment line invalid. Check comment parsing.\n{}'.format(
expnum, str(obs.comment))
)
continue
uri = storage.get_uri(expnum)
sky_coord = obs.coordinate # Using the WCS rather than the X/Y (X/Y can be unreliable over the whole survey)
print('Trying {} on {} on {}...'.format(obj.provisional_name, obs.date, expnum))
try:
hdulist = storage.ra_dec_cutout(uri, sky_coord, radius)
# if not 'ASTLEVEL' in hdulist[1].header: # FIXME: activate once all headers are retro-fitted with ASTLEVEL
# logging.info('Cutout invalid for use. Skipping inclusion.\n')
# continue
postage_stamp_filename = "{}_{:11.5f}_{:09.5f}_{:+09.5f}.fits".format(obj.provisional_name,
obs.date.mjd,
obs.coordinate.ra.degree,
obs.coordinate.dec.degree)
print("{}".format(postage_stamp_filename))
with open(postage_stamp_filename, 'w') as tmp_file:
hdulist.writeto(tmp_file, clobber=True)
storage.copy(postage_stamp_filename, obj_dir + "/" + postage_stamp_filename)
os.unlink(postage_stamp_filename) # easier not to have them hanging around
except OSError, e: # occasionally the node is not found: report and move on for later cleanup
print e
continue