def run(self):
try:
from parfive import Downloader
except ImportError:
log.error(
"The parfive package needs to be installed to download files with gammapy download"
)
return
if self.listfiles:
log.info("Content will be downloaded in {}".format(self.outfolder))
dl = Downloader(progress=self.progress)
for rec in self.listfiles:
url = self.listfiles[rec]["url"]
path = self.outfolder / self.listfiles[rec]["path"]
md5 = ""
if "hashmd5" in self.listfiles[rec]:
md5 = self.listfiles[rec]["hashmd5"]
retrieve = True
if md5 and path.exists():
md5local = hashlib.md5(path.read_bytes()).hexdigest()
if md5local == md5:
retrieve = False
if retrieve:
dl.enqueue_file(url, path=str(path.parent))
try:
dl.download()
except Exception as ex:
log.error("Failed to download files.")
log.error(ex)
def mas_helio():
"""
Get some MAS heliospheric data files. These are taken from CR2210, which
is used for PSP data comparisons in the documentation examples.
"""
mas_helio_dir = download_dir / 'mas_helio'
mas_helio_dir.mkdir(parents=True, exist_ok=True)
base_url = 'http://www.predsci.com/data/runs/cr2210-medium/hmi_masp_mas_std_0201/helio/{var}002.hdf'
# Create a downloader to queue the files to be downloaded
dl = Downloader()
vars = ['rho', 'vr', 'br']
for var in vars:
file = mas_helio_dir / f'{var}002.hdf'
if file.exists():
continue
else:
remote_file = base_url.format(var=var)
dl.enqueue_file(remote_file, path=mas_helio_dir)
# Download the files
if dl.queued_downloads > 0:
dl.download()
return mas_helio_dir.resolve()
def download(self, url, path):
downloader = Downloader()
path = Path(path)
filename = path.name
directory = path.parent
downloader.enqueue_file(url, directory, filename)
try:
downloader.download()
except Exception as e:
raise DownloaderError from e
def run(self):
try:
from parfive import Downloader
except ImportError:
log.error("To use gammapy download, install the parfive package!")
return
if self.listfiles:
log.info(f"Content will be downloaded in {self.outfolder}")
dl = Downloader(progress=self.progress, file_progress=False)
for rec in self.listfiles:
url = self.listfiles[rec]["url"]
path = self.outfolder / self.listfiles[rec]["path"]
md5 = ""
if "hashmd5" in self.listfiles[rec]:
md5 = self.listfiles[rec]["hashmd5"]
retrieve = True
if md5 and path.exists():
md5local = hashlib.md5(path.read_bytes()).hexdigest()
if md5local == md5:
retrieve = False
if retrieve:
dl.enqueue_file(url, path=str(path.parent))
log.info(f"{dl.queued_downloads} files to download.")
res = dl.download()
log.info(f"{len(res)} files downloaded.")
for err in res.errors:
_, _, exception = err
log.error(f"Error: {exception}")
def fetch(self, qres, path=None, overwrite=False,
progress=True, downloader=None, wait=True):
"""
Download a set of results.
Parameters
----------
qres : `~sunpy.net.dataretriever.QueryResponse`
Results to download.
path : `str` or `pathlib.Path`, optional
Path to the download directory, or file template including the
``{file}`` string which will be replaced with the filename.
overwrite : `bool` or `str`, optional
Determine how to handle downloading if a file already exists with the
same name. If `False` the file download will be skipped and the path
returned to the existing file, if `True` the file will be downloaded
and the existing file will be overwritten, if `'unique'` the filename
will be modified to be unique.
progress : `bool`, optional
If `True` show a progress bar showing how many of the total files
have been downloaded. If `False`, no progress bar will be shown.
downloader : `parfive.Downloader`, optional
The download manager to use.
wait : `bool`, optional
If `False` ``downloader.download()`` will not be called. Only has
any effect if `downloader` is not `None`.
Returns
-------
results: `parfive.Results`
"""
if path is not None:
path = Path(path)
urls = [qrblock.url for qrblock in qres.blocks]
filenames = [url.split('/')[-1] for url in urls]
paths = self._get_full_filenames(qres, filenames, path)
dl_set = True
if not downloader:
dl_set = False
downloader = Downloader(progress=progress, overwrite=overwrite)
for url, filename in zip(urls, paths):
downloader.enqueue_file(url, filename=filename)
if dl_set and not wait:
return
return downloader.download()
def fetch(self, qres, path=None, overwrite=False,
progress=True, downloader=None, wait=True):
"""
Download a set of results.
Parameters
----------
qres : `~sunpy.net.dataretriever.QueryResponse`
Results to download.
path : `str` or `pathlib.Path`, optional
Path to the download directory, or file template including the
``{file}`` string which will be replaced with the filename.
progress : `bool`, optional
If `True` show a progress bar showing how many of the total files
have been downloaded. If `False`, no progress bar will be shown.
overwrite : `bool` or `str`, optional
Determine how to handle downloading if a file already exists with the
same name. If `False` the file download will be skipped and the path
returned to the existing file, if `True` the file will be downloaded
and the existing file will be overwritten, if `'unique'` the filename
will be modified to be unique.
downloader : `parfive.Downloader`, optional
The download manager to use.
wait : `bool`, optional
If `False` ``downloader.download()`` will not be called. Only has
any effect if `downloader` is not `None`.
Returns
-------
results: `parfive.Results`
"""
if path is not None:
path = Path(path)
urls = [qrblock.url for qrblock in qres]
filenames = [url.split('/')[-1] for url in urls]
paths = self._get_full_filenames(qres, filenames, path)
dl_set = True
if not downloader:
dl_set = False
downloader = Downloader(progress=progress, overwrite=overwrite)
for url, filename in zip(urls, paths):
downloader.enqueue_file(url, filename=filename)
if dl_set and not wait:
return
return downloader.download()
def download_files_parfive(list_of_files, pathy="/Users/laurahayes/ionospheric_work/ionospheric-analysis/vlf_codes/vlf_bas_files/"):
dl = Downloader()
for f in list_of_files:
filename = f.split('/')[-1]
dl.enqueue_file(f, path=pathy)
files = dl.download()
def getenvironment(self):
try:
from parfive import Downloader
except ImportError:
log.error("To use gammapy download, install the parfive package!")
return
dl = Downloader(progress=False, file_progress=False)
filename_env = "gammapy-" + self.release + "-environment.yml"
url_file_env = BASE_URL + "/install/" + filename_env
filepath_env = str(self.outfolder / filename_env)
dl.enqueue_file(url_file_env, path=filepath_env)
try:
log.info(f"Downloading {url_file_env}")
Path(filepath_env).parent.mkdir(parents=True, exist_ok=True)
dl.download()
except Exception as ex:
log.error(ex)
exit()
def test_multipart_with_error(multipartserver, tmp_path):
multipartserver.callback = partial(error_on_nth_request, 3)
dl = Downloader(progress=False)
max_splits = 5
dl.enqueue_file(multipartserver.url, path=tmp_path, max_splits=max_splits)
files = dl.download()
assert len(files) == 0
assert len(files.errors) == 1
assert isinstance(files.errors[0].exception, MultiPartDownloadError)
expected_file = tmp_path / "testfile.txt"
assert not expected_file.exists()
def main():
args = parser.parse_args()
dataset = args.dataset
# Load annotations
annFile = '../annotations/instances_{}.json'.format(dataset)
assert os.path.isfile(annFile)
cocoPath = './{}'.format(dataset)
try:
os.mkdir(cocoPath)
except FileExistsError:
pass
# Init coco
coco = COCO(annFile)
personCatID = coco.getCatIds(catNms=['person'])[0]
cocoImageIds = coco.getImgIds(catIds=personCatID)
print("Putting all urls into big list!")
urls = []
for i in cocoImageIds:
cocoImg = coco.loadImgs(i)[0]
annIds = coco.getAnnIds(imgIds=cocoImg["id"],
catIds=personCatID,
iscrowd=None)
annotation = coco.loadAnns(annIds)[0]
if annotation["iscrowd"] == 0:
urls.append(cocoImg["coco_url"])
print("Enqueueing download of {} items".format(len(urls)))
dl = Downloader()
for url in urls:
dl.enqueue_file(url, path=cocoPath)
print("Downloading files...")
dl.download()
def test_multipart(multipartserver, tmp_path):
dl = Downloader(progress=False)
max_splits = 5
dl.enqueue_file(multipartserver.url, path=tmp_path, max_splits=max_splits)
files = dl.download()
# Verify we transferred all the content
with open(files[0], "rb") as fobj:
assert fobj.read() == b"a" * 100
# Assert that we made the expected number of requests
assert len(multipartserver.requests) == max_splits + 1
assert "HTTP_RANGE" not in multipartserver.requests[0]
for split_req in multipartserver.requests[1:]:
assert "HTTP_RANGE" in split_req
def main():
args = parse_args(sys.argv[1:])
downloader = Downloader(max_conn=args.max_conn,
file_progress=not args.no_file_progress,
overwrite=args.overwrite)
for url in args.urls:
downloader.enqueue_file(url, path=args.directory)
results = downloader.download()
for i in results:
print(i)
err_str = ''
for err in results.errors:
err_str += f'{err.url} \t {err.exception}\n'
if err_str:
sys.exit(err_str)
def download_beacon(dtime):
datestr = dtime.strftime('%Y%m%d')
for time in [
'000530',
'001615',
'005530',
'010530',
'011530',
'043530',
]:
url = ('https://stereo-ssc.nascom.nasa.gov/pub/beacon/ahead/secchi/img'
f'/euvi/{datestr}/{datestr}_{time}_n7euA.fts')
print(url)
dl = Downloader()
dl.enqueue_file(url, path=map_path(dtime).parent)
files = dl.download()
if len(files.errors):
continue
pathlib.Path(files[0]).replace(map_path(dtime))
return
raise RuntimeError(f'No EUVI beacon map available for {dtime}')
def fetch(self, query_response, path=None, methods=None, site=None,
progress=True, overwrite=False, downloader=None, wait=True):
"""
Download data specified in the query_response.
Parameters
----------
query_response : sunpy.net.vso.QueryResponse
QueryResponse containing the items to be downloaded.
path : str
Specify where the data is to be downloaded. Can refer to arbitrary
fields of the QueryResponseItem (instrument, source, time, ...) via
string formatting, moreover the file-name of the file downloaded can
be referred to as file, e.g.
"{source}/{instrument}/{time.start}/{file}".
methods : {list of str}
Download methods, defaults to URL-FILE_Rice then URL-FILE.
Methods are a concatenation of one PREFIX followed by any number of
SUFFIXES i.e. `PREFIX-SUFFIX_SUFFIX2_SUFFIX3`.
The full list of
`PREFIXES <https://sdac.virtualsolar.org/cgi/show_details?keyword=METHOD_PREFIX>`_
and `SUFFIXES <https://sdac.virtualsolar.org/cgi/show_details?keyword=METHOD_SUFFIX>`_
are listed on the VSO site.
site : str
There are a number of caching mirrors for SDO and other
instruments, some available ones are listed below.
=============== ========================================================
NSO National Solar Observatory, Tucson (US)
SAO (aka CFA) Smithonian Astronomical Observatory, Harvard U. (US)
SDAC (aka GSFC) Solar Data Analysis Center, NASA/GSFC (US)
ROB Royal Observatory of Belgium (Belgium)
MPS Max Planck Institute for Solar System Research (Germany)
UCLan University of Central Lancashire (UK)
IAS Institut Aeronautique et Spatial (France)
KIS Kiepenheuer-Institut fur Sonnenphysik Germany)
NMSU New Mexico State University (US)
=============== ========================================================
progress : `bool`, optional
If `True` show a progress bar showing how many of the total files
have been downloaded. If `False`, no progress bars will be shown at all.
overwrite : `bool` or `str`, optional
Determine how to handle downloading if a file already exists with the
same name. If `False` the file download will be skipped and the path
returned to the existing file, if `True` the file will be downloaded
and the existing file will be overwritten, if `'unique'` the filename
will be modified to be unique.
downloader : `parfive.Downloader`, optional
The download manager to use.
wait : `bool`, optional
If `False` ``downloader.download()`` will not be called. Only has
any effect if `downloader` is not `None`.
Returns
-------
out : `parfive.Results`
Object that supplies a list of filenames and any errors.
Examples
--------
>>> files = fetch(qr) # doctest:+SKIP
"""
if path is None:
path = os.path.join(config.get('downloads', 'download_dir'),
'{file}')
elif isinstance(path, str) and '{file}' not in path:
path = os.path.join(path, '{file}')
path = os.path.expanduser(path)
dl_set = True
if not downloader:
dl_set = False
downloader = Downloader(progress=progress)
fileids = VSOClient.by_fileid(query_response)
if not fileids:
return downloader.download()
# Adding the site parameter to the info
info = {}
if site is not None:
info['site'] = site
VSOGetDataResponse = self.api.get_type("VSO:VSOGetDataResponse")
data_request = self.make_getdatarequest(query_response, methods, info)
data_response = VSOGetDataResponse(self.api.service.GetData(data_request))
err_results = self.download_all(data_response, methods, downloader, path, fileids)
if dl_set and not wait:
return err_results
results = downloader.download()
results += err_results
results._errors += err_results.errors
return results
def fetch(self, *query_results, path=None, max_conn=5, progress=True,
overwrite=False, downloader=None, **kwargs):
"""
Download the records represented by
`~sunpy.net.fido_factory.UnifiedResponse` objects.
Parameters
----------
query_results : `sunpy.net.fido_factory.UnifiedResponse`
Container returned by query method, or multiple.
path : `str`
The directory to retrieve the files into. Can refer to any fields
in `UnifiedResponse.response_block_properties` via string formatting,
moreover the file-name of the file downloaded can be referred to as file,
e.g. "{source}/{instrument}/{time.start}/{file}".
max_conn : `int`, optional
The number of parallel download slots.
progress : `bool`, optional
If `True` show a progress bar showing how many of the total files
have been downloaded. If `False`, no progress bars will be shown at all.
overwrite : `bool` or `str`, optional
Determine how to handle downloading if a file already exists with the
same name. If `False` the file download will be skipped and the path
returned to the existing file, if `True` the file will be downloaded
and the existing file will be overwritten, if `'unique'` the filename
will be modified to be unique.
downloader : `parfive.Downloader`, optional
The download manager to use. If specified the ``max_conn``,
``progress`` and ``overwrite`` arguments are ignored.
Returns
-------
`parfive.Results`
Examples
--------
>>> from sunpy.net.attrs import Time, Instrument
>>> unifresp = Fido.search(Time('2012/3/4','2012/3/5'), Instrument('EIT')) # doctest: +REMOTE_DATA
>>> filepaths = Fido.fetch(unifresp) # doctest: +SKIP
If any downloads fail, they can be retried by passing the `parfive.Results` object back into ``fetch``.
>>> filepaths = Fido.fetch(filepaths) # doctest: +SKIP
"""
if path is not None:
exists = list(filter(lambda p: p.exists(), Path(path).parents))
if not os.access(exists[0], os.W_OK):
raise PermissionError('You do not have permission to write'
f' to the directory {exists[0]}.')
if "wait" in kwargs:
raise ValueError("wait is not a valid keyword argument to Fido.fetch.")
if downloader is None:
downloader = Downloader(max_conn=max_conn, progress=progress, overwrite=overwrite)
elif not isinstance(downloader, Downloader):
raise TypeError("The downloader argument must be a parfive.Downloader object.")
# Handle retrying failed downloads
retries = [isinstance(arg, Results) for arg in query_results]
if all(retries):
results = Results()
for retry in query_results:
dr = downloader.retry(retry)
results.data += dr.data
results._errors += dr._errors
return results
elif any(retries):
raise TypeError("If any arguments to fetch are "
"`parfive.Results` objects, all arguments must be.")
reslist = []
for query_result in query_results:
for block in query_result.responses:
reslist.append(block.client.fetch(block, path=path,
downloader=downloader,
wait=False, **kwargs))
results = downloader.download()
# Combine the results objects from all the clients into one Results
# object.
for result in reslist:
if result is None:
continue
if not isinstance(result, Results):
raise TypeError(
"If wait is False a client must return a parfive.Downloader and either None"
" or a parfive.Results object.")
results.data += result.data
results._errors += result.errors
return results
def fetch(self, *query_results, path=None, max_conn=5, progress=True,
overwrite=False, downloader=None, **kwargs):
"""
Download the records represented by
`~sunpy.net.fido_factory.UnifiedResponse` objects.
Parameters
----------
query_results : `sunpy.net.fido_factory.UnifiedResponse`
Container returned by query method, or multiple.
path : `str`
The directory to retrieve the files into. Can refer to any fields
in `UnifiedResponse.response_block_properties` via string formatting,
moreover the file-name of the file downloaded can be referred to as file,
e.g. "{source}/{instrument}/{time.start}/{file}".
max_conn : `int`, optional
The number of parallel download slots.
progress : `bool`, optional
If `True` show a progress bar showing how many of the total files
have been downloaded. If `False`, no progress bars will be shown at all.
overwrite : `bool` or `str`, optional
Determine how to handle downloading if a file already exists with the
same name. If `False` the file download will be skipped and the path
returned to the existing file, if `True` the file will be downloaded
and the existing file will be overwritten, if `'unique'` the filename
will be modified to be unique.
downloader : `parfive.Downloader`, optional
The download manager to use. If specified the ``max_conn``,
``progress`` and ``overwrite`` arguments are ignored.
Returns
-------
`parfive.Results`
Examples
--------
>>> from sunpy.net.vso.attrs import Time, Instrument
>>> unifresp = Fido.search(Time('2012/3/4','2012/3/5'), Instrument('EIT')) # doctest: +REMOTE_DATA
>>> filepaths = Fido.fetch(unifresp) # doctest: +SKIP
If any downloads fail, they can be retried by passing the `parfive.Results` object back into ``fetch``.
>>> filepaths = Fido.fetch(filepaths) # doctest: +SKIP
"""
if "wait" in kwargs:
raise ValueError("wait is not a valid keyword argument to Fido.fetch.")
if downloader is None:
downloader = Downloader(max_conn=max_conn, progress=progress, overwrite=overwrite)
elif not isinstance(downloader, Downloader):
raise TypeError("The downloader argument must be a parfive.Downloader object.")
# Handle retrying failed downloads
retries = [isinstance(arg, Results) for arg in query_results]
if all(retries):
results = Results()
for retry in query_results:
dr = downloader.retry(retry)
results.data += dr.data
results._errors += dr._errors
return results
elif any(retries):
raise TypeError("If any arguments to fetch are "
"`parfive.Results` objects, all arguments must be.")
reslist = []
for query_result in query_results:
for block in query_result.responses:
reslist.append(block.client.fetch(block, path=path,
downloader=downloader,
wait=False, **kwargs))
results = downloader.download()
# Combine the results objects from all the clients into one Results
# object.
for result in reslist:
if result is None:
continue
if not isinstance(result, Results):
raise TypeError(
"If wait is False a client must return a parfive.Downloader and either None"
" or a parfive.Results object.")
results.data += result.data
results._errors += result.errors
return results
def get_request(self, requests, path=None, overwrite=False, progress=True,
downloader=None, wait=True):
"""
Query JSOC to see if the request(s) is ready for download.
If the request is ready for download, it will then download it.
Parameters
----------
requests : `~drms.ExportRequest`, `str`, `list`
`~drms.ExportRequest` objects or `str` request IDs or lists
returned by `~sunpy.net.jsoc.jsoc.JSOCClient.request_data`.
path : `str`
Path to save data to, defaults to SunPy download dir.
progress : `bool`, optional
If `True` show a progress bar showing how many of the total files
have been downloaded. If `False`, no progress bar will be shown.
overwrite : `bool` or `str`, optional
Determine how to handle downloading if a file already exists with the
same name. If `False` the file download will be skipped and the path
returned to the existing file, if `True` the file will be downloaded
and the existing file will be overwritten, if `'unique'` the filename
will be modified to be unique.
downloader : `parfive.Downloader`, optional
The download manager to use.
wait : `bool`, optional
If `False` ``downloader.download()`` will not be called. Only has
any effect if `downloader` is not `None`.
Returns
-------
res: `~sunpy.net.download.Results`
A `~sunpy.net.download.Results` instance or `None` if no URLs to download
"""
c = drms.Client()
# Convert Responses to a list if not already
if isinstance(requests, str) or not isiterable(requests):
requests = [requests]
# Ensure all the requests are drms ExportRequest objects
for i, request in enumerate(requests):
if isinstance(request, str):
r = c.export_from_id(request)
requests[i] = r
# We only download if all are finished
if not all([r.has_succeeded() for r in requests]):
raise NotExportedError("Can not download as not all the requests "
"have been exported for download yet.")
# Ensure path has a {file} in it
if path is None:
default_dir = config.get("downloads", "download_dir")
path = os.path.join(default_dir, '{file}')
elif isinstance(path, str) and '{file}' not in path:
path = os.path.join(path, '{file}')
paths = []
for request in requests:
for filename in request.data['filename']:
# Ensure we don't duplicate the file extension
ext = os.path.splitext(filename)[1]
if path.endswith(ext):
fname = path.strip(ext)
else:
fname = path
fname = fname.format(file=filename)
fname = os.path.expanduser(fname)
paths.append(fname)
dl_set = True
if not downloader:
dl_set = False
downloader = Downloader(progress=progress, overwrite=overwrite)
urls = []
for request in requests:
if request.status == 0:
for index, data in request.data.iterrows():
url_dir = request.request_url + '/'
urls.append(urllib.parse.urljoin(url_dir, data['filename']))
if urls:
if progress:
print_message = "{0} URLs found for download. Full request totalling {1}MB"
print(print_message.format(len(urls), request._d['size']))
for aurl, fname in zip(urls, paths):
downloader.enqueue_file(aurl, filename=fname)
if dl_set and not wait:
return Results()
results = downloader.download()
return results
def euvi_pch_data_download(rootpath='',
start_date='2007/05/01',
end_date='2019/01/01'):
# Crawl through and scrape the EUVI wavelet images
url_head = 'http://sd-www.jhuapl.edu/secchi/wavelets/fits/'
start_date = parse_time(start_date).to_datetime()
end_date = parse_time(end_date).to_datetime()
resp = request.urlopen(url_head)
soup = BeautifulSoup(resp,
from_encoding=resp.info().get_param('charset'),
features="lxml")
subs = [
link.text for link in soup.find_all('a', href=True)
if link.text.endswith('/')
]
substime = [datetime.datetime.strptime(s, '%Y%m/') for s in subs]
gooddate = [
s >= (start_date - datetime.timedelta(days=start_date.day - 1))
and (s <= end_date) for s in substime
]
url_subdir1 = [
parse.urljoin(url_head, sub_dir)
for sub_dir, gd in zip(subs, gooddate) if gd
]
dl = Downloader()
if not rootpath:
save_dir = os.path.abspath(os.path.curdir)
else:
save_dir = os.path.abspath(rootpath)
# crawling until a full list has been generated
for subdir1 in url_subdir1:
resp = request.urlopen(subdir1)
soup = BeautifulSoup(resp,
from_encoding=resp.info().get_param('charset'),
features="lxml")
subs = [
link.text for link in soup.find_all('a', href=True)
if link.text.endswith('/')
]
url_subdir2 = [parse.urljoin(subdir1, sub_dir) for sub_dir in subs]
for subdir2 in url_subdir2:
resp = request.urlopen(subdir2)
soup = BeautifulSoup(
resp,
from_encoding=resp.info().get_param('charset'),
features="lxml")
subs = [
link.text for link in soup.find_all('a', href=True)
if link.text.endswith('/')
]
url_subdir3 = [parse.urljoin(subdir2, sub_dir) for sub_dir in subs]
for subdir3 in url_subdir3:
subs = []
resp = request.urlopen(subdir3)
soup = BeautifulSoup(
resp,
from_encoding=resp.info().get_param('charset'),
features="lxml")
subs = [
link.text for link in soup.find_all('a', href=True)
if link.text.endswith('.fts.gz')
]
if len(subs) > 1:
image_url = [
parse.urljoin(subdir3, sub_dir) for sub_dir in subs
]
# save_path = [os.path.join(save_dir, subdir3.split('fits/')[1], path) for path in subs]
save_path = [
os.path.join(save_dir,
subdir3.split('fits/')[1])
for path in subs
]
image_times = [
datetime_from_euvi_filename(path) for path in subs
]
# grab every 4 hours
dt = list(
np.logical_not([
np.mod((time - image_times[0]).seconds, 14400)
for time in image_times
]))
if np.sum(dt) < 6:
dt2 = list(
np.logical_not([
np.mod((time - image_times[1]).seconds, 14400)
for time in image_times
]))
if len(dt2) > len(dt):
dt = dt2
st = [tt >= start_date for tt in image_times]
et = [tt <= end_date for tt in image_times]
goodness = [(aa and bb and cc)
for aa, bb, cc in zip(dt, st, et)]
if np.sum(goodness):
os.makedirs(os.path.join(save_dir,
subdir3.split('fits/')[1]),
exist_ok=True)
# download each image
for good_image, image_loc, image_destination in zip(
goodness, image_url, save_path):
if good_image:
dl.enqueue_file(image_loc, path=image_destination)
files = dl.download()
print('Downloaded EUVI ' +
wavelength_from_euvi_filename(files[0]) +
'images for ' + image_times[0].strftime('%Y-%m-%d'))
else:
print('Too few images detected in: ', subdir3)
def fetch(self,
query_response,
path=None,
methods=None,
site=None,
progress=True,
overwrite=False,
downloader=None,
wait=True):
"""
Download data specified in the query_response.
Parameters
----------
query_response : sunpy.net.vso.QueryResponse
QueryResponse containing the items to be downloaded.
path : str
Specify where the data is to be downloaded. Can refer to arbitrary
fields of the QueryResponseItem (instrument, source, time, ...) via
string formatting, moreover the file-name of the file downloaded can
be referred to as file, e.g.
"{source}/{instrument}/{time.start}/{file}".
methods : {list of str}
Download methods, defaults to URL-FILE_Rice then URL-FILE.
Methods are a concatenation of one PREFIX followed by any number of
SUFFIXES i.e. `PREFIX-SUFFIX_SUFFIX2_SUFFIX3`.
The full list of
`PREFIXES <https://sdac.virtualsolar.org/cgi/show_details?keyword=METHOD_PREFIX>`_
and `SUFFIXES <https://sdac.virtualsolar.org/cgi/show_details?keyword=METHOD_SUFFIX>`_
are listed on the VSO site.
site : str
There are a number of caching mirrors for SDO and other
instruments, some available ones are listed below.
=============== ========================================================
NSO National Solar Observatory, Tucson (US)
SAO (aka CFA) Smithonian Astronomical Observatory, Harvard U. (US)
SDAC (aka GSFC) Solar Data Analysis Center, NASA/GSFC (US)
ROB Royal Observatory of Belgium (Belgium)
MPS Max Planck Institute for Solar System Research (Germany)
UCLan University of Central Lancashire (UK)
IAS Institut Aeronautique et Spatial (France)
KIS Kiepenheuer-Institut fur Sonnenphysik Germany)
NMSU New Mexico State University (US)
=============== ========================================================
progress : `bool`, optional
If `True` show a progress bar showing how many of the total files
have been downloaded. If `False`, no progress bars will be shown at all.
overwrite : `bool` or `str`, optional
Determine how to handle downloading if a file already exists with the
same name. If `False` the file download will be skipped and the path
returned to the existing file, if `True` the file will be downloaded
and the existing file will be overwritten, if `'unique'` the filename
will be modified to be unique.
downloader : `parfive.Downloader`, optional
The download manager to use.
wait : `bool`, optional
If `False` ``downloader.download()`` will not be called. Only has
any effect if `downloader` is not `None`.
Returns
-------
out : `parfive.Results`
Object that supplies a list of filenames and any errors.
Examples
--------
>>> files = fetch(qr) # doctest:+SKIP
"""
if path is None:
path = os.path.join(config.get('downloads', 'download_dir'),
'{file}')
elif isinstance(path, str) and '{file}' not in path:
path = os.path.join(path, '{file}')
path = os.path.expanduser(path)
dl_set = True
if not downloader:
dl_set = False
downloader = Downloader(progress=progress)
fileids = VSOClient.by_fileid(query_response)
if not fileids:
return downloader.download() if wait else Results()
# Adding the site parameter to the info
info = {}
if site is not None:
info['site'] = site
VSOGetDataResponse = self.api.get_type("VSO:VSOGetDataResponse")
data_request = self.make_getdatarequest(query_response, methods, info)
data_response = VSOGetDataResponse(
self.api.service.GetData(data_request))
err_results = self.download_all(data_response, methods, downloader,
path, fileids)
if dl_set and not wait:
return err_results
results = downloader.download()
results += err_results
results._errors += err_results.errors
return results
def fetch(self, qres, path=None, error_callback=None, **kwargs):
"""
Download a set of results.
Parameters
----------
qres : `~sunpy.net.dataretriever.QueryResponse`
Results to download.
Returns
-------
Results Object
"""
urls = [qrblock.url for qrblock in qres]
filenames = []
local_filenames = []
for i, [url, qre] in enumerate(zip(urls, qres)):
name = url.split('/')[-1]
# temporary fix !!! coz All QRBs have same start_time values
day = Time(qre.time.start.strftime('%Y-%m-%d')) + TimeDelta(
i * u.day)
if name not in filenames:
filenames.append(name)
if name.endswith('.gz'):
local_filenames.append('{}SRS.txt'.format(
day.strftime('%Y%m%d')))
else:
local_filenames.append(name)
# Files to be actually downloaded
paths = self._get_full_filenames(qres, filenames, path)
# Those files that will be present after get returns
local_paths = self._get_full_filenames(qres, local_filenames, path)
# remove duplicate urls. This will make paths and urls to have same number of elements.
# OrderedDict is required to maintain ordering because it will be zipped with paths later
urls = list(OrderedDict.fromkeys(urls))
dobj = Downloader(max_conn=5)
for aurl, fname in zip(urls, paths):
dobj.enqueue_file(aurl, filename=fname)
paths = dobj.download()
outfiles = []
for fname, srs_filename in zip(local_paths, local_filenames):
name = fname.name
past_year = False
for i, fname2 in enumerate(paths):
fname2 = pathlib.Path(fname2)
if fname2.name.endswith('.txt'):
continue
year = fname2.name.split('_SRS')[0]
if year in name:
TarFile = tarfile.open(fname2)
filepath = fname.parent
member = TarFile.getmember('SRS/' + srs_filename)
member.name = name
TarFile.extract(member, path=filepath)
TarFile.close()
outfiles.append(fname)
past_year = True
break
if past_year is False:
outfiles.append(fname)
paths.data = list(map(str, outfiles))
return paths
def get_request(self,
requests,
path=None,
overwrite=False,
progress=True,
downloader=None,
wait=True):
"""
Query JSOC to see if the request(s) is ready for download.
If the request is ready for download, it will then download it.
Parameters
----------
requests : `~drms.ExportRequest`, `str`, `list`
`~drms.ExportRequest` objects or `str` request IDs or lists
returned by `~sunpy.net.jsoc.jsoc.JSOCClient.request_data`.
path : `str`
Path to save data to, defaults to SunPy download dir.
progress : `bool`, optional
If `True` show a progress bar showing how many of the total files
have been downloaded. If `False`, no progress bar will be shown.
overwrite : `bool` or `str`, optional
Determine how to handle downloading if a file already exists with the
same name. If `False` the file download will be skipped and the path
returned to the existing file, if `True` the file will be downloaded
and the existing file will be overwritten, if `'unique'` the filename
will be modified to be unique.
downloader : `parfive.Downloader`, optional
The download manager to use.
wait : `bool`, optional
If `False` ``downloader.download()`` will not be called. Only has
any effect if `downloader` is not `None`.
Returns
-------
res: `~sunpy.net.download.Results`
A `~sunpy.net.download.Results` instance or `None` if no URLs to download
"""
c = drms.Client()
# Convert Responses to a list if not already
if isinstance(requests, str) or not isiterable(requests):
requests = [requests]
# Ensure all the requests are drms ExportRequest objects
for i, request in enumerate(requests):
if isinstance(request, str):
r = c.export_from_id(request)
requests[i] = r
# We only download if all are finished
if not all([r.has_succeeded() for r in requests]):
raise NotExportedError("Can not download as not all the requests "
"have been exported for download yet.")
# Ensure path has a {file} in it
if path is None:
default_dir = config.get("downloads", "download_dir")
path = os.path.join(default_dir, '{file}')
elif isinstance(path, str) and '{file}' not in path:
path = os.path.join(path, '{file}')
paths = []
for request in requests:
for filename in request.data['filename']:
# Ensure we don't duplicate the file extension
ext = os.path.splitext(filename)[1]
if path.endswith(ext):
fname = path.strip(ext)
else:
fname = path
fname = fname.format(file=filename)
fname = os.path.expanduser(fname)
paths.append(fname)
dl_set = True
if not downloader:
dl_set = False
downloader = Downloader(progress=progress, overwrite=overwrite)
urls = []
for request in requests:
if request.status == 0:
for index, data in request.data.iterrows():
url_dir = request.request_url + '/'
urls.append(urllib.parse.urljoin(url_dir,
data['filename']))
if urls:
if progress:
print_message = "{0} URLs found for download. Full request totalling {1}MB"
print(print_message.format(len(urls), request._d['size']))
for aurl, fname in zip(urls, paths):
downloader.enqueue_file(aurl, filename=fname)
if dl_set and not wait:
return Results()
results = downloader.download()
return results
def fetch(self, qres, path=None, error_callback=None, **kwargs):
"""
Download a set of results.
Parameters
----------
qres : `~sunpy.net.dataretriever.QueryResponse`
Results to download.
Returns
-------
Results Object
"""
urls = [qrblock.url for qrblock in qres]
filenames = []
local_filenames = []
for i, [url, qre] in enumerate(zip(urls, qres)):
name = url.split('/')[-1]
# temporary fix !!! coz All QRBs have same start_time values
day = Time(qre.time.start.strftime('%Y-%m-%d')) + TimeDelta(i*u.day)
if name not in filenames:
filenames.append(name)
if name.endswith('.gz'):
local_filenames.append('{}SRS.txt'.format(day.strftime('%Y%m%d')))
else:
local_filenames.append(name)
# Files to be actually downloaded
paths = self._get_full_filenames(qres, filenames, path)
# Those files that will be present after get returns
local_paths = self._get_full_filenames(qres, local_filenames, path)
# remove duplicate urls. This will make paths and urls to have same number of elements.
# OrderedDict is required to maintain ordering because it will be zipped with paths later
urls = list(OrderedDict.fromkeys(urls))
dobj = Downloader(max_conn=5)
for aurl, fname in zip(urls, paths):
dobj.enqueue_file(aurl, filename=fname)
paths = dobj.download()
outfiles = []
for fname, srs_filename in zip(local_paths, local_filenames):
name = fname.name
past_year = False
for i, fname2 in enumerate(paths):
fname2 = pathlib.Path(fname2)
if fname2.name.endswith('.txt'):
continue
year = fname2.name.split('_SRS')[0]
if year in name:
TarFile = tarfile.open(fname2)
filepath = fname.parent
member = TarFile.getmember('SRS/' + srs_filename)
member.name = name
TarFile.extract(member, path=filepath)
TarFile.close()
outfiles.append(fname)
past_year = True
break
if past_year is False:
outfiles.append(fname)
paths.data = list(map(str, outfiles))
return paths