def test_contigset_split(self): ref = ReferenceSet(data.getXml(9)) exp_n_contigs = len(ref) refs = ref.split(10) self.assertEqual(len(refs), 10) obs_n_contigs = 0 for r in refs: obs_n_contigs += sum(1 for _ in r) self.assertEqual(obs_n_contigs, exp_n_contigs)
def test_contigset_len(self): ref = ReferenceSet(data.getXml(9)) exp_n_contigs = len(ref) refs = ref.split(10) self.assertEqual(len(refs), 10) obs_n_contigs = 0 for r in refs: obs_n_contigs += len(r) self.assertEqual(obs_n_contigs, exp_n_contigs)
def test_contigset_len(self): ref = ReferenceSet(data.getXml(8)) exp_n_contigs = len(ref) refs = ref.split(10) assert len(refs) == 10 obs_n_contigs = 0 for r in refs: obs_n_contigs += len(r) assert obs_n_contigs == exp_n_contigs