Python write_random_fasta_records Examples

Example #1

def _args_run_to_random_fasta_file(args):
    M.write_random_fasta_records(args.fasta_out, args.max_records)
    return 0

Example #2

File: test_dataset_io.py Project: yqin22/pbsmrtpipe

 def _write_mock_file(self, p):
     M.write_random_fasta_records(p, nrecords=self.NRECORDS)

Example #3

File: dev.py Project: dayedepps/pbsmrtpipe

def run_rtc(rtc):
    nrecords = 1000
    write_random_fasta_records(rtc.task.output_files[0], nrecords)
    return 0

Example #4

File: dev.py Project: dayedepps/pbsmrtpipe

def run_rtc(rtc):
    max_records = rtc.tasks.options[_to_opt_id("alpha")]
    return write_random_fasta_records(rtc.task.output_files[0], max_records)

Example #5

File: dev.py Project: knyquist/pbsmrtpipe

def _args_run_to_random_fasta_file(args):
    M.write_random_fasta_records(args.fasta_out, args.max_records)
    return 0