def getAllSpectralLibraries():
projectId = request.args.get('projectId')
if (projectDAO.getProjectById(projectId)):
spec_libs = spectralLibraryDAO.getAllLibrariesForProject(projectId)
for s in spec_libs:
augmentedClinicalSamples = clinicalSampleDAO.augmentClinicalSampleNames(
s['clinicalSamples'])
augmentedMSRuns = MSRunDAO.augmentMSRunNames(s['msRunIds'])
s['clinicalSamples'] = augmentedClinicalSamples
s['msRunIds'] = augmentedMSRuns
return jsonify(spec_libs), status.HTTP_200_OK
else:
return 'Project with id does not exist.', status.HTTP_404_NOT_FOUND
def getAllSwathAnalysis():
projectId = request.args.get('projectId')
if (projectDAO.getProjectById(projectId)):
swath_analysis = swathAnalysisDAO.getSWATHByProject(projectId)
for s in swath_analysis:
augmentedClinicalSamples = clinicalSampleDAO.augmentClinicalSampleNames(
s['clinicalSamples'])
augmentedMSRuns = MSRunDAO.augmentMSRunNames(
s['msRunIds'])
s['clinicalSamples'] = augmentedClinicalSamples
s['msRunIds'] = augmentedMSRuns
return jsonify(swath_analysis), status.HTTP_200_OK
else:
return 'Project with id does not exist.', status.HTTP_404_NOT_FOUND