def optimize_people_model(host, port):
ppl_model_data = 'ppl_model_data.pickle'
result_data = 'estimator_results.pickle'
print("Loading model data")
try:
with open(ppl_model_data, "rb") as pickle_in:
model = pload(pickle_in)
print('Loaded from Pickle')
except Exception as e:
print("Loading from database...", e)
x = MODEL_DB.read_file('ml_product_data').sort("uploadDate", -1).limit(1)
model = pload(x[0])
print("Saving model data to disk for next time")
with open(ppl_model_data, "wb") as pickle_out:
pdump(model, pickle_out)
print("Running gridsearchCV")
estimator_results = test_estimators(est_dicts, model)
plot_best_estimator(estimator_results)
print(
"Saving gridsearchCV results, explore by un-pickling",
result_data,
"with an IPython shell or python program.")
with open(result_data, "wb") as pickle_out:
pdump(estimator_results, pickle_out)
def step4_results_visulisation(path_input_file):
# Make file and directory names
dir_work = os.path.dirname(path_input_file)
obj_file_name = os.path.basename(path_input_file)
id_ = obj_file_name.split(" - ")[0] # Obtain ID string
# Load settings
path_settings_file = os.path.join(dir_work, "{} - {}".format(id_, "prefs.p"))
dict_settings = pload(open(path_settings_file, "rb"))
height_building = dict_settings["building_height"]
# Load the dataframe obj file
df_results = pload(open(path_input_file, "rb"))
# Define horizontal line(s) to plot
if height_building > 0:
y__ = 1 - 64.8 / height_building ** 2
else:
y__ = 0.5
# Obtain time equivalence, in minutes, as x-axis values
x = np.sort(df_results["TIME EQUIVALENCE [min]"].values * 60.)
y = np.arange(1, len(x) + 1) / len(x)
f_interp = interp1d(y, x)
if height_building > 0:
y_line = 1 - 64.8 / height_building ** 2
x_line = f_interp(y_line)
else:
x_line = y_line = 0
plt = Scatter2D()
plt_format = {"figure_size_scale": 0.7,
"axis_lim_y1": (0, 1),
"axis_lim_x": (0, 120),
"legend_is_shown": False,
"axis_label_x": "Time Equivalence [min]",
"axis_label_y1": "Fractile",
"marker_size": 0}
plt.plot2(x/60, y, "Simulation results")
plt.format(**plt_format)
if height_building > 0:
x_end = plt.axes_primary.get_xlim()[1]
y_end = plt.axes_primary.get_ylim()[1]
x_line_ = x_line/60.
y_line_ = y_line
plt.plot_vertical_line(x=x_line_)
plt.axes_primary.text(x=x_line_, y=y_end, s="{:.0f}".format(x_line_), va="bottom", ha="center", fontsize=6)
plt.plot_horizontal_line(y=y_line_)
plt.axes_primary.text(x=x_end, y=y_line_, s="{:.4f}".format(y_line_), va="center", ha="left", fontsize=4)
file_name = "{} - {}{}".format(id_, "res_plot_teq", ".png")
file_path = os.path.join(dir_work, file_name)
plt.save_figure2(file_path)
saveprint(file_name)
def load_data():
input_setences, tags = None, None
with open("./dumps/naver_movies_sentences.bin", 'rb') as fp:
input_setences = pload(fp)
with open("./dumps/tags.bin", 'rb') as fp:
tags = pload(fp)
if not input_setences or not tags:
raise TypeError
return input_setences, tags
def showSettings(self, where):
if self.showsettings.get() == 0:
self.app.grid_forget()
self.update()
self.top.update()
set_save=""
export = []
if self.thetype == "IPs":
set_save = self.a.IPdimensions
if self.thetype == "URLs":
set_save = self.a.URLdimensions
if self.thetype == "SPECs":
set_save = self.a.SPECIALdimensions
export.append(int(self.winfo_width()))
export.append(int(self.winfo_height()))
pdump( export, open(set_save, 'wb'))
if self.showsettings.get() == 1:
self.app.grid(column=4, row=where, sticky="NW")
self.app.update()
self.update()
self.top.update()
set_save = ""
export = []
if self.thetype == "IPs":
set_save = self.a.IPdimensions
if self.thetype == "URLs":
set_save = self.a.URLdimensions
if self.thetype == "SPECs":
set_save = self.a.SPECIALdimensions
export.append(int(self.winfo_width()))
export.append(int(self.winfo_height()))
pdump(export, open(set_save, 'wb'))
if (path.getsize(self.a.IPdimensions) > 0) and (path.getsize(self.a.URLdimensions) > 0) and (path.getsize(self.a.SPECIALdimensions) > 0):
self.update()
IPs_dim = pload(open(self.a.IPdimensions, "rb"))
URLs_dim = pload(open(self.a.URLdimensions, "rb"))
SPECs_dim = pload(open(self.a.SPECIALdimensions, "rb"))
theIPx = int(IPs_dim[0])
theIPy = int(IPs_dim[1])
theURLx = int(URLs_dim[0])
theURLy = int(URLs_dim[1])
theSPECx = int(SPECs_dim[0])
theSPECy = int(SPECs_dim[1])
newx = 0
newy = theIPy + theURLy + theSPECy + 15
if (theIPx > newx):
newx = theIPx
if (theURLx > newx):
newx = theURLx
if (theSPECx > newx):
newx = theSPECx
self.top.geometry(str(newx) + "x" + str(newy))
self.top.update()
def step6_results_visualization_temperature(path_input_file):
# Make file and directory names
dir_work = os.path.dirname(path_input_file)
obj_file_name = os.path.basename(path_input_file)
id_ = obj_file_name.split(" - ")[0] # Obtain ID string
# Load settings
path_settings_file = os.path.join(dir_work, "{} - {}".format(id_, "prefs.p"))
dict_settings = pload(open(path_settings_file, "rb"))
height_building = dict_settings["building_height"]
# Load the dataframe obj file
df_results = pload(open(path_input_file, "rb"))
# Define horizontal line(s) to plot
# if height_building > 0:
# y__ = 1 - 64.8 / height_building ** 2
# else:
# y__ = 0.5
# Obtain time equivalence, in minutes, as x-axis values
x = df_results["PEAK STEEL TEMPERATURE TO FIXED PROTECTION [C]"].values
x = np.sort(x)
y = np.arange(1, len(x) + 1) / len(x)
# f_interp = interp1d(y, x)
# if height_building > 0:
# y_line = 1 - 64.8 / height_building ** 2
# x_line = f_interp(y_line)
# else:
# x_line = y_line = 0
plt = Scatter2D()
plt_format = {"figure_size_scale": 0.7,
"axis_lim_y1": (0, 1),
# "axis_lim_x": (0, 120),
"legend_is_shown": False,
"axis_label_x": "Peak Steel Temperature [$^\circ$C]",
"axis_label_y1": "Fractile",
"marker_size": 0}
plt.plot2(x, y, "Simulation results")
plt.format(**plt_format)
file_name = "{} - {}{}".format(id_, "res_plot_temp", ".png")
file_path = os.path.join(dir_work, file_name)
plt.save_figure2(file_path)
saveprint(os.path.basename(file_path))
def from_list_of_dicts(cls, events_list):
""" Returns an Events instance built using the given dicts.
Parameters
----------
events_list (list of dictionaries, or path to pickled file)
This can either be an actual list, or the location of a pickled
list. We'll group the events by 'name' into DataFrames, then pass
those to from_dict. Note that only field that appear in every
dictionary with a given name will make it through to the
corresponding DataFrame.
"""
import os
from pickle import load as pload
if isinstance(events_list, str):
if not os.path.isfile(events_list):
raise ValueError("Could not find file %s" % events_list)
evl = pload(events_list)
else:
evl = events_list
evd = {}
for ev in evl:
if not "name" in ev:
continue
if not ev["name"] in evd:
evd[ev["name"]] = [ev]
else:
evd[ev["name"]].append(ev)
for k in list(evd.keys()):
evd[k] = pd.DataFrame(evd[k])
return cls.from_dict(evd)
def main(args):
args.top_ns = arg_to_list(args.top_ns)
lang2i = '{}2i'.format(args.lang)
texts_mapping = jload(open(args.mapping_path))
corpus_vecs = pload(open(args.corpus_vectors_path, 'rb'))
golden_standard_ids = load_golden_standart(args.golden_standard_path,
texts_mapping, lang2i)
corp_sims = [] # списки предсказанного для каждого текста
for i in tqdm(range(len(corpus_vecs))):
target_vec = corpus_vecs[i]
sim_ids = predict_sim(target_vec, corpus_vecs)
corp_sims.append(sim_ids)
top_accuracies = [
eval_acc(top_n, golden_standard_ids, corp_sims)
for top_n in args.top_ns
]
top_strings = [
'ТОП-{}:\t{}'.format(top_n, top_acc)
for top_n, top_acc in zip(args.top_ns, top_accuracies)
]
print('\n'.join(top_strings))
def __authorize(self):
# Get credentials
credentials = None
if not USE_SERVICE_ACCOUNTS:
if ospath.exists(self.__G_DRIVE_TOKEN_FILE):
with open(self.__G_DRIVE_TOKEN_FILE, 'rb') as f:
credentials = pload(f)
if credentials is None or not credentials.valid:
if credentials and credentials.expired and credentials.refresh_token:
credentials.refresh(Request())
else:
flow = InstalledAppFlow.from_client_secrets_file(
'credentials.json', self.__OAUTH_SCOPE)
LOGGER.info(flow)
credentials = flow.run_console(port=0)
# Save the credentials for the next run
with open(self.__G_DRIVE_TOKEN_FILE, 'wb') as token:
pdump(credentials, token)
else:
LOGGER.info(
f"Authorizing with {SERVICE_ACCOUNT_INDEX}.json service account"
)
credentials = service_account.Credentials.from_service_account_file(
f'accounts/{SERVICE_ACCOUNT_INDEX}.json',
scopes=self.__OAUTH_SCOPE)
return build('drive',
'v3',
credentials=credentials,
cache_discovery=False)
def from_list_of_dicts(cls, events_list):
""" Returns an Events instance built using the given dicts.
Parameters
----------
events_list (list of dictionaries, or path to pickled file)
This can either be an actual list, or the location of a pickled
list. We'll group the events by 'name' into DataFrames, then pass
those to from_dict. Note that only field that appear in every
dictionary with a given name will make it through to the
corresponding DataFrame.
"""
import os
from pickle import load as pload
if isinstance(events_list, str):
if not os.path.isfile(events_list):
raise ValueError("Could not find file %s" % events_list)
evl = pload(events_list)
else:
evl = events_list
evd = {}
for ev in evl:
if not "name" in ev:
continue
if not ev["name"] in evd:
evd[ev["name"]] = [ev]
else:
evd[ev["name"]].append(ev)
for k in list(evd.keys()):
evd[k] = pd.DataFrame(evd[k])
return cls.from_dict(evd)
def __init__(self, file_path="savefile"):
try:
with open(file_path, "rb") as read_file:
self.user_text = pload(read_file)
except (IOError, EOFError):
self.user_text = dict()
self.save_file = open("savefile", "wb")
def run(project_full_paths=list()):
_strfmt_1_1 = "{:25}{}"
__fn_output = "res.p"
global __run_count
__run_count += 1
if len(project_full_paths) == 0 or __run_count > 1:
from tkinter import filedialog, Tk, StringVar
root = Tk()
root.withdraw()
folder_path = StringVar()
while True:
file_name = filedialog.askdirectory(
title='Select problem definitions folder')
if not file_name: break
folder_path.set(file_name)
project_full_paths.append(file_name)
# MAIN BODY
# =========
for project_full_path in project_full_paths:
list_path_input_file = step0_parse_input_files(
dir_work=project_full_path)
list_path_input_file.sort()
list_input, list_output, list_pref, list_id = [], [], [], []
print(_strfmt_1_1.format("Work directory:", project_full_path))
for path_input_file in list_path_input_file:
id_ = os.path.basename(path_input_file).split(".")[0]
# Step 1: make a list of key word arguments for function inputs
# -------------------------------------------------------------
df_input, dict_pref = step1_inputs_maker(path_input_file)
ff = os.path.join(project_full_path, " - ".join([id_,
__fn_output]))
if os.path.isfile(ff):
df_output = pload(open(ff, "rb"))
else:
# Step 2: perform main time equivalence calculation
# -------------------------------------------------
df_output = step2_calc(df_input, dict_pref, path_input_file)
list_input.append(df_input)
list_id.append(id_)
list_pref.append(dict_pref)
list_output.append(df_output)
# Step 3: select fire curves and output numerical and graphical files
# -------------------------------------------------------------------
step3_calc_post(list_path_input_file, list_pref, list_output)
input("Press Enter to finish")
def step4_results_visulisation(path_input_file, height_building):
dir_work = os.path.dirname(path_input_file)
obj_file_name = os.path.basename(path_input_file)
# Obtain ID string
id_ = obj_file_name.split(" - ")[0]
# Load the dataframe obj file
df_results = pload(open(path_input_file, "rb"))
# Obtain time equivalence, in minutes, as x-axis values
x = df_results["TIME EQUIVALENCE [min]"].values * 60.
# Filter out entries with failed seek status, i.e. peak steel temperature is not within the tolerance.
# seek_status = df_results["SEEK STATUS [bool]"].values
# x = x[seek_status == 1]
# Define horizontal line(s) to plot
y__ = 1 - 64.8 / height_building**2
x, y, x_, y_, xy_found = mc_post_processing(x, y_find=[y__])
plt = Scatter2D()
plt.plot2(x / 60, y, "Simulation results")
# plt.plot2(x_/60, y_, "Interpolated CDF")
plt.format(
**{
"figure_size_scale": 0.7,
"axis_lim_y1": (0, 1),
"axis_lim_x": (0, 120),
"legend_is_shown": False,
"axis_label_x": "Time Equivalence [min]",
"axis_label_y1": "Fractile",
"marker_size": 0
})
# plt.update_line_format("Interpolated CDF", **{"line_width": 0.5, "color": "black", "line_style": ":"})
for i in np.arange(0, len(xy_found), 1):
x_found, y_found = xy_found[i, :]
plt.plot_vertical_line(x=x_found / 60.)
plt.plot_horizontal_line(y=y_found)
plt.axes_primary.text(x=x_found / 60 + 1,
y=y_found - 0.01,
s="({:.0f}, {:.4f})".format(
x_found / 60, y_found),
va="top",
ha="left",
fontsize=6)
# plt.update_legend(legend_loc=0)
plt.save_figure(file_name=" - ".join([id_, "res_plot"]),
file_format=".pdf",
dir_folder=dir_work)
print("POST PROCESSING COMPLETE")
def open_df(filename):
'''Opens pickled DataFrame object
Args:
filename (str): path to pickled file
Returns:
DataFrame: opened DataFrame
'''
with open(filename, 'rb') as data_file:
return pload(data_file)
def main(target_article_path,
lang,
mapping_path,
corpus_vectors_path,
top=1,
verbose=1,
included=1,
udpipe_path='',
keep_pos=1,
keep_stops=0,
keep_punct=0,
method='',
embeddings_path='',
bidict_path='',
projection_path='',
no_duplicates=0,
with_url=0,
url_mapping_path=''):
i2lang = 'i2{}'.format(lang)
lang2i = '{}2i'.format(lang)
texts_mapping = jload(open(mapping_path))
corpus_vecs = pload(open(corpus_vectors_path, 'rb'))
article_data = None
if with_url:
article_data = load_article_data(url_mapping_path)
if included:
target_article = target_article_path
target_article_id = texts_mapping[lang2i].get(target_article)
if target_article_id is None: # просто not нельзя, т.к. есть статьи с id 0
print(texts_mapping['en2i'])
print(target_article)
raise NotIncludedError
target_article_vec = corpus_vecs[target_article_id]
else:
target_article, target_article_vec = prepare_new_article(
target_article_path, udpipe_path, keep_pos, keep_punct, keep_stops,
method, embeddings_path, no_duplicates, projection_path,
bidict_path)
similars = search_similar(target_article_vec, corpus_vecs)
rating, verbosed_rating, missed_urls = make_rating(target_article,
similars, verbose, top,
included, texts_mapping,
i2lang, with_url,
article_data)
return rating, verbosed_rating, missed_urls
def load_vectorized(output_vectors_path, forced):
"""загрузка матрицы с векторами корпуса, если есть"""
# если существует уже какой-то векторизованный корпус
if os.path.isfile(output_vectors_path) and not forced:
vectorized = pload(open(output_vectors_path, 'rb'))
print('Уже что-то векторизовали!', file=sys.stderr)
else: # ничего ещё из этого корпуса не векторизовали или принудительно обновляем всё
print('Ничего ещё не разбирали, сейчас будем.', file=sys.stderr)
vectorized = []
return vectorized
def rec_load(ctype, file):
if (issubclass(ctype, SerializableObject)):
return ctype.unserialize(file)
elif (issubclass(ctype, list) or issubclass(ctype, tuple)):
# Reading the starting mark
pload(file)
# Starting the empty collection
res = []
# Reading each element
current = pload(file)
while (current != FinishSequenceSerializable):
# If it is not over, current is the type for the next element
res += [rec_load(get_class(current), file)]
current = pload(file)
# Return the appropriate type of collection
return ctype(res)
elif (issubclass(ctype, dict)):
# Reading the starting mark
pload(file)
# Starting the empty collection
res = {}
# Reading each element
current = pload(file)
while (current != FinishSequenceSerializable):
# If it is not over, current is the type for the next key
key = rec_load(get_class(current), file)
v_type = pload(file)
value = rec_load(get_class(v_type), file)
res[key] = value
current = pload(file)
return res
else:
return pload(file)
def load(root):
with open(join(root, "db.pkl"), "rb") as f:
db = pload(f)
if not compatible(* db.version):
raise IncompatibleVersion
# just to be safe
db.root = root
db.lock()
return db
def step3_results_numerical(path_input_file):
# Make prefix, suffix, file and directory strings
dir_cwd = os.path.dirname(path_input_file)
name_obj_file = os.path.basename(path_input_file)
id_ = name_obj_file.split(" - ")[0]
path_csv_file = os.path.join(dir_cwd, "{} - {}".format(id_, "res_num.csv"))
# Load the dataframe obj file
df_results = pload(open(path_input_file, "rb"))
# Save the dataframe to csv file
df_results.to_csv(path_csv_file, index=True, sep=",")
saveprint(os.path.basename(path_csv_file))
def load_model(cls, path):
"""Loads a saved model from a .hdf5 file and updates its attributes. In case of a multi-output model, the .pkl
file is loaded, since .hdf5 is not supported yet.
Parameters:
path (str): Path including the file name, from where the model should be loaded.
Returns:
GPy.models: Instantiated surrogate model.
"""
from profit.util import load
from .encoders import Encoder
from GPy import models
self = cls()
try:
sur_dict = load(path, as_type='dict')
self.model = models.GPRegression.from_dict(sur_dict['model'])
self.Xtrain = sur_dict['Xtrain']
self.ytrain = sur_dict['ytrain']
self.encoder = [
Encoder(func, cols, out)
for func, cols, out in eval(sur_dict['encoder'])
]
except (OSError, FileNotFoundError):
from pickle import load as pload
from os.path import splitext
# Load multi-output model from pickle file
print(
"File {} not found. Trying to find a .pkl file with multi-output instead."
.format(path))
self.model, self.Xtrain, self.ytrain, encoder_str = pload(
open(splitext(path)[0] + '.pkl', 'rb'))
self.encoder = [
Encoder(func, cols, out)
for func, cols, out in eval(encoder_str)
]
self.output_ndim = int(max(self.model.X[:, -1])) + 1
self.multi_output = True
# Initialize the encoder by encoding and decoding the training data once.
self.encode_training_data()
self.decode_training_data()
self.kernel = self.model.kern
self._set_hyperparameters_from_model()
self.ndim = self.Xtrain.shape[-1]
self.trained = True
self.print_hyperparameters("Loaded")
return self
def step3_results_numerical(path_input_file):
dir_work = os.path.dirname(path_input_file)
obj_file_name = os.path.basename(path_input_file)
# Obtain ID string
id_ = obj_file_name.split(" - ")[0]
# Obtain full directory of the dataframe obj file
dir_csv_file = os.path.join(dir_work, "{} - {}".format(id_, "res_num.csv"))
# Load the dataframe obj file
df_results = pload(open(path_input_file, "rb"))
# Save the dataframe to csv file
df_results.to_csv(dir_csv_file, index=True, sep=",")
def get_access_token(path_to_tok='./translate.tok'):
if fexist(path_to_tok):
ftok = open(path_to_tok, 'r+')
tokdata = pload(ftok)
expiretime = tokdata['expires_in']
if (datetime.now() - expiretime) > timedelta(10,0):
return tokdata['token']
else:
ftok = open(path_to_tok, 'w')
args = {'client_id':clientid,'client_secret':clientse,'scope':'http://api.microsofttranslator.com/','grant_type':'client_credentials'}
enc_args = urllib.urlencode(args)
req = urllib2.Request(tok_url,enc_args)
response = urllib2.urlopen(req)
data = json.load(response)
timeandten = datetime.now() + timedelta(minutes = 10)
pdump({'token':data['access_token'],'expires_in':timeandten}, ftok)
return data['access_token']
def cache(target, args, identifier=None, cache_life=3 * 24 * 3600):
''' Run the target function with the given args, and store it to a pickled
cache folder using the given identifier or the name of the function. The
next time it is executed, the cached output is returned unless cache_life
time expires. '''
if identifier == None: identifier = target.__name__
identifier = sub(r'[/\\\*;\[\]\'\":=,<>\?\|]', '_', identifier)
path = join(PATH_RESOURCES, f'.pickled/{identifier}.pk')
makedirs(dirname(path), exist_ok=True)
now = time()
if exists(path):
with open(path, 'rb') as fp:
save_time, value = pload(fp)
if now - save_time <= cache_life:
return value
res = target(*args)
with open(path, 'wb') as fp:
pdump((now, res), fp, protocol=3)
return res
def open_mc10(fpath):
"""
Open saved (serialized) data previously imported with load_mc10
Parameters
----------
fpath : str
Path to the file to be opened and loaded
Returns
-------
data : dict
Dictionary of saved data. See load_mc10 for data structure
"""
fid = open(fpath, 'rb') # open the file
data = pload(fid) # import data
fid.close() # close the file
return data
def rescue(identifier,
function,
arguments,
path_data="data",
path_cache=".pickled/%s.pk",
cache_life=259200,
sr=22500,
window=45000,
invalid=r"[/\\\*;\[\]\":=,<>]"):
""" Caches the output of a function. """
path = path_cache % sub(invalid, "_", identifier)
makedirs(dirname(path), exist_ok=True)
if exists(path):
with open(path, "rb") as fp:
save_time, rate, value, window = pload(fp)
if NOW - save_time <= cache_life and rate == sr and window == window:
return value
res = function(*arguments)
with open(path, "wb") as fp:
pdump((NOW, sr, res, window), fp, protocol=3)
return res
def test_delay_buf_sink(self):
"""
make sure that delay of 0 and heat sink of 100% leak rate
both result in identical results as old thingy.
@return:
@rtype:
"""
ref = self.regression_folder + '\\ref_delay1.pickle'
from pickle import load as pload
with open(ref, 'rb') as f:
exp = pload(f)
sim = TempSim(28, 19, 0, delay=0)
pid = PIDController(37, 40, 30, ideal=False)
result = self.run_process(sim, pid, 9500)
for exp_pt, res_pt in zip(exp, result):
self.assertEqual(exp_pt, res_pt)
async def load(self, ctx, *, name):
player = self.lavalink.player_manager.get(ctx.guild.id)
playlists = listdir(path.join('resources', 'playlists'))
playlist_name = f'{ctx.author.id}_{name.lower()}'
try:
validate_filename(playlist_name)
except ValidationError:
return await ctx.send('Запрещенные символы в названии плейлиста')
if playlist_name not in playlists:
return await ctx.send(
f'Нет плейлиста с таким названием\nДля просмотра своих плейлистов используйте {ctx.prefix}playlists'
)
with open(path.join('resources', 'playlists', playlist_name),
'rb') as queue_file:
queue = pload(queue_file)
for track in queue:
player.add(requester=ctx.author.id, track=track)
ln = len(queue)
await ctx.send(
f'Плейлист {name} [{ln} {sform(ln, "трек")}] добавлен в очередь')
if not player.is_playing:
await player.play()
def test_tweet_partial():
'''
This function tests if
Useful if no network connection is obtained
'''
# tweetClass.classify_images() This requires a Google Vsision connection
# Run offline tests
homedir = Path(join(Path(__file__).parent, '..')).resolve(strict=True)
fname = join(homedir, 'twitter_test', 'brabbott42_200tweets.p')
outdir = join(homedir, 'output')
if not isfile(fname):
print(f'Could not find file: {fname}')
assert False, 'Expected a twitter object to be saved for testing'
try:
twit_obj = pload(open(fname, 'rb'))
except:
assert False, 'could not load object'
try:
twit_obj.iteration = 0 # Make it build the dir for the first time
if isdir(outdir):
print(f'Detected output directory {outdir}')
rmtree(outdir)
twit_obj.makeoutputfolder()
except:
assert False, 'Could not make (or remove old) output directory'
try:
sumfile = twit_obj.write_summaryfile()
except:
assert False, 'Could not make summary file'
try:
word_cloud_from_txt(sumfile)
except:
assert False, 'Could not make word cloud'
assert True
def get_pickle(self, run, tag, form='', warn=True):
dic = {'PH': join('Ph_fit', '{tc}_{run}_{ch}_10000_eventwise_b2'),
'Ped': join('Pedestal', '{tc}_{run}_{ch}_ab2_fwhm_AllCuts'),
'Pul': join('Pulser', 'HistoFit_{tc}_{run}_{ch}_ped_corr_BeamOn'),
'Cur': join('Currents', '{tc}_{run}_{ch}'),
'PulPed': join('Pedestal', '{tc}_{run}_{ch}_ac2_fwhm_PulserBeamOn')}
path = join(self.Dir, 'Pickles', '{}.pickle'.format(dic[tag])).format(tc=self.TestCampaign, run=run, ch=self.Channel)
if not file_exists(path):
if 'pixel' not in self.DetectorType.lower() and warn:
warning('did not find {p}'.format(p=path))
return
with open(path) as f:
try:
value = pload(f)
if type(value) is Variable:
return value
fit = FitRes(value, form)
if fit.Parameter(0) is None:
warning('empty fitparameter pickle for: {}'.format(basename(path)))
return
return fit
except ImportError as err:
warning(err)
def get(self, name, call_seq):
if self.counter[name] < call_seq:
raise CallNotLogged
dest = join(self.root, self.calls[name][call_seq - 1]["loc"])
if not exists(dest):
raise CannotFindRecord
with open(join(dest, "input_descriptor.pkl"), "rb") as f:
input_descriptor = pload(f)
args = [None]*len(input_descriptor["args"])
for i, elt in enumerate(input_descriptor["args"]):
elt.load(dest)
args[i] = elt.data
kwargs = dict()
for k, elt in input_descriptor["kwargs"].items():
elt.load(dest)
kwargs[k] = elt.data
return args, kwargs
def loadAndCacheDbHTMLPages(databaseSiteBaseURL, databaseSiteHTMLDumpPath,
numPages):
if path.exists(databaseSiteHTMLDumpPath):
print("## Status: Found cached copy of Music 4 Dance website.")
databaseSiteHTMLPages = pload(open(databaseSiteHTMLDumpPath, "rb"))
else:
# Make HTTP request
try:
databaseSiteHTMLPages = []
for i in range(numPages):
databaseSiteHTMLPages.append(
getHTML(databaseSiteBaseURL + "?page=%d" % (i + 1)).text)
except:
print("!! Error: Retrieving Music 4 Dance website unsuccessfull.")
exit(0)
else:
print("## Status: Retrieved Music 4 Dance website.")
# Save for later
pdump(databaseSiteHTMLPages, open(databaseSiteHTMLDumpPath, "wb"))
print("## Status: Cached copy of Music 4 Dance website for later.")
return databaseSiteHTMLPages
def read_pickle(filename):
"""Read in pickle file.
See more at `pickle <https://docs.python.org/3/library/pickle.html>`_.
Parameters
----------
filename : str
Full filename with path of file.
Returns
-------
dict
Data object.
"""
assert isinstance(filename, str)
with open(filename, "rb") as f:
data = pload(f)
assert isinstance(data, dict)
return data
def loadGame():
i = 0
while not i == 1:
system(clear)
print('CURRENT SAVED GAMES:\n')
path = f'{getcwd()}{slash}saves'
system(f'{viewDir} {path}')
loadGameName = input('\nWHICH SAVE WOULD YOU LIKE TO LOAD?\n\nENTER HERE (0 TO GO BACK): ')
if str(loadGameName) == '0':
return False
try:
loadThisGame = open(f'{path}{slash}{loadGameName.lower()}', 'rb')
i = 1
except FileNotFoundError:
system(clear)
print('NAME OF SAVE GAME NOT FOUND\nTRY AGAIN')
sleep(1)
playerDict = pload(loadThisGame)
PLAYER_LIST.clear()
for player in playerDict:
PLAYER_LIST.append(playerDict[player])
generateCityStartSupplies() # todo: save city information instead and then load that dict
return
def __alt_authorize(self):
credentials = None
if USE_SERVICE_ACCOUNTS and not self.alt_auth:
self.alt_auth = True
if ospath.exists(self.__G_DRIVE_TOKEN_FILE):
LOGGER.info("Authorize with token.pickle")
with open(self.__G_DRIVE_TOKEN_FILE, 'rb') as f:
credentials = pload(f)
if credentials is None or not credentials.valid:
if credentials and credentials.expired and credentials.refresh_token:
credentials.refresh(Request())
else:
flow = InstalledAppFlow.from_client_secrets_file(
'credentials.json', self.__OAUTH_SCOPE)
LOGGER.info(flow)
credentials = flow.run_console(port=0)
# Save the credentials for the next run
with open(self.__G_DRIVE_TOKEN_FILE, 'wb') as token:
pdump(credentials, token)
return build('drive',
'v3',
credentials=credentials,
cache_discovery=False)
return None
def load_model(cls, path):
"""Loads a saved model from a .hdf5 file and updates its attributes. In case of a multi-output model, the .pkl
file is loaded, since .hdf5 is not supported yet.
Parameters:
path (str): Path including the file name, from where the model should be loaded.
Returns:
GPy.models: Instantiated surrogate model.
"""
from profit.util import load
from GPy import models
self = cls()
try:
model_dict = load(path, as_type='dict')
self.model = models.GPRegression.from_dict(model_dict)
self.Xtrain = self.model.X
self.ytrain = self.model.Y
except (OSError, FileNotFoundError):
from pickle import load as pload
from os.path import splitext
# Load multi-output model from pickle file
self.model = pload(open(splitext(path)[0] + '.pkl', 'rb'))
self.output_ndim = int(max(self.model.X[:, -1])) + 1
self.Xtrain = self.model.X[:len(self.model.X) // self.output_ndim, :-1]
self.ytrain = self.model.Y.reshape(-1, self.output_ndim, order='F')
self.multi_output = True
self.kernel = self.model.kern
self._set_hyperparameters_from_model()
self.ndim = self.Xtrain.shape[-1]
self.trained = True
self.print_hyperparameters("Loaded")
return self
def test_get_access_token(self):
token = t.get_access_token()
ftok = open('./translate.tok', 'r')
self.assertEqual(unicode,type(token))
self.assertEqual(dict,type(pload(ftok)))
def main(argv, stop_after_init=False, preset_set_of_users=None):
pickle_path_lptq = '/tmp/process_log_times_pq.bin.gz'
pickle_path_clicks = '/tmp/process_log_clicks.bin.gz'
pickle_path_clusters = '/tmp/process_log_clusters.dict.txt.gz'
pickle_path_removed_queries = '/tmp/process_log_removed_queries.lst.txt.gz'
pickle_path_big_queries_set = '/tmp/process_log_big_queries_set.lst.txt.gz'
pickle_path_users = '/tmp/process_log_usets_set.lst.txt.gz'
argc = len(argv)
if argc <= len(CLI_ARGS):
print "Usage: %s" % argv[0], ' '.join(CLI_ARGS)
print "Currently missing parameters arguments:", ' '.join(CLI_ARGS[len(argv)-1:])
exit()
global mdb_host
mdb_host = argv[1].strip()
filter_queries_file = argv[2].strip()
allowed_users_file = argv[3].strip()
log_filepath = argv[4].strip()
clusters_file = argv[5].strip()
queries_to_ids_file = argv[6].strip()
t_init = time()
# print "Starting... compute_everything()"
# t0 = time()
# everything = compute_everything(mdb_host, filter_queries_file, allowed_users_file)
# removed_queries = everything['removed_queries']
# print "Done ", time()-t0
########################################################################################################################
# We are going to do a lot of "is in allowed users?" so we need a set, not a list
print "Loading users..."
# users_set = set([int(line.strip()) for line in univ_open(allowed_users_file, mode='r')])
# We use compute_everything because it gets rid of the null-clusters queries before retrieving the list
# of users, thus reducing the dataset overall, as queries are then retrieved from the users set
t0 = time()
global users_set
if preset_set_of_users is not None:
users_set = preset_set_of_users
else:
try:
print "Trying to pickle from disk...", pickle_path_users
with gzopen(pickle_path_users, 'r') as f:
print "File", pickle_path_users, "was found!"
users_set = set(load_pickled_list(f))
pickled = True
except Exception as err:
print "Error for", pickle_path_users, "was:", err
# if not isinstance(err, IOError):
print "No pickled files or error loading it, recomputing..."
pickled = False
# Note: here we use compute_everything because it will load the queries clusters OF THE INITIAL QUERIES only
# remove the ones that have null clusterings
# and then generate the list of users who queried the pruned list of queries
# we do not direclty use the clusters from it, nor the queries, because we still have to remove the other queries
# that have null clustering vectors. By "other queries" we mean not queries we use as the seed to select some user/data
# any queries that is part of a user profile of one of the allowed users (the ones who queried the query list seed)
# this bigger queries set is generated by load_big_query_set() in this file
users_set = set(compute_everything(mdb_host, filter_queries_file, allowed_users_file)['users'])
print "Done ", time()-t0
print "Total number of users that will be analyzed:", len(users_set)
pickle_ask(pickled, pickle_path_users, users_set, dump_f=pickle_list)
print "Done ", time()-t0
# everything = None # We are not using it afterwards, so, this should help the GC
####################################################################################################################
# import itertoolsmodule as iter
print "Computing the set of allowed queries..."
t0 = time()
try:
print "Trying to pickle from disk...", pickle_path_big_queries_set
with gzopen(pickle_path_big_queries_set, 'r') as f:
big_queries_set = set(load_pickled_list(f))
pickled = True
except Exception as err:
if not isinstance(err, IOError):
print "Error for", pickle_path_big_queries_set, "was:", err
print "No pickled files or error loading it, recomputing..."
pickled = False
big_queries_set = load_big_query_set(log_filepath, users_set)
print "Done ", time()-t0
print "Total number of queries that will be analyzed:", len(big_queries_set)
pickle_ask(pickled, pickle_path_big_queries_set, big_queries_set, dump_f=pickle_list)
####################################################################################################################
global clusters
print "Pre-initializing clusters dict..."
t0 = time()
clusters = dict.fromkeys(big_queries_set)
print "clusters now has", len(clusters), "keys"
print "Done ", time()-t0
print "Retrieving big list of clusters for the", len(big_queries_set), "queries..."
t0 = time()
global clusters_loaded
clusters_loaded = False
p_clusters, mapres_clusters = run_in_bg_process(do_process_clusters_pickle, (pickle_path_clusters,))
def join_clusters():
p_clusters.join()
global clusters, clusters_loaded
if clusters_loaded:
return clusters
result = mapres_clusters.get()[0]
if result is False:
# The pickling from disk did not work, recompute it in place (join_clusters() is called when clusters are
# NEEDED so we cannot wait/async this))
print "Error while pickling clusters from disk", pickle_path_clusters, ", recomputing..."
t0 = time()
result = do_process_clusters_recompute(big_queries_set, clusters_file, queries_to_ids_file, clusters)
print "Done do_process_clusters_recompute()", time()-t0
# Any user input needs to be on the main thread, pickle ask will by itself send the pickling task to a bg
# worker process if the user answers yes
pickle_ask(False, pickle_path_clusters, result, dump_f=picke_dict)
clusters_loaded = True
clusters = result
return clusters
########################################################################################################################
removed_queries = compute_removed_queries_because_of_null_clustering(pickle_path_removed_queries, clusters, join_clusters)
print "Removed", len(removed_queries), "out of", len(big_queries_set)
########################################################################################################################
t1 = time()
print "Launching process_log_clicks computation in a separated process"
p_lpc, lpc_mapres = run_in_bg_process(process_log_clicks, (log_filepath, users_set, removed_queries))
p_lpc.close()
########################################################################################################################
########################################################################################################################
print "Starting... process_log_times_pq()"
t0 = time()
try:
print "Trying to pickle from disk...", pickle_path_lptq
lptpq = pload(gzopen(pickle_path_lptq, 'rb'))
pickled = True
except Exception as err:
if not isinstance(err, IOError):
print "Error for", pickle_path_lptq, "was:", err
print "No pickled files or error loading it, recomputing..."
pickled = False
lptpq = process_log_times_pq(log_filepath, users_set, removed_queries)
print "Done process_log_times_pq() in", time()-t0
pickle_ask(pickled, pickle_path_lptq, lptpq)
print "Starting... process_log_clicks()"
t0 = time()
# Note: Disabled the pickling as, for some reason, it does not work
# and there is only ~15s difference between recomputation and pickling from disk anyway...
# try:
# print "Trying to pickle from disk..."
# lpc = pload(open(pickle_path_clicks, 'rb'))
# pickled = True
# except Exception as err:
# if not isinstance(err, IOError):
# print "Error was:", err
# print "No pickled files or error loading it, recomputing..."
# pickled = False
# lpc = process_log_clicks(log_filepath, users_set, removed_queries)
########################################################################################################################
########################################################################################################################
print "waiting for the pool to finish, if not finished yet..."
p_lpc.join()
lpc = lpc_mapres.get()[0]
print "Took a total time of", time()-t1, "or less"
########################################################################################################################
########################################################################################################################
print "Done ", time()-t0
# pickle_ask(pickled, pickle_path_clicks, lpc)
print "Some reprocessing..."
# We need the clusters from now on, so let us wait for the children process to be finished and the data
# transferred back to us
join_clusters()
print "Removing null-vectors clusters queries from `clusters`..."
t0 = time()
for qid in removed_queries:
try:
del clusters[qid]
except KeyError:
pass # If it was already not there, that's perfect
print "Done ", time()-t0
t0 = time()
for user_queries_dic in lpc.user_clicks_number:
if user_queries_dic is None:
continue
del user_queries_dic['_id']
for user_queries_dic in lptpq.user_queries_number:
if user_queries_dic is None:
continue
del user_queries_dic['_id']
print "Done ", time()-t0
# Deprecated, for now, but we might switch back to it so, keep it for now
print "Computing number of users who issued the query, per query..."
t0 = time()
number_of_users_who_queried = dict.fromkeys(big_queries_set - removed_queries, 0)
for query_dict in lptpq.user_queries_number:
if query_dict is None:
continue
for qid in query_dict:
number_of_users_who_queried[qid] += 1
print "Done ", time()-t0
print "Computing number of users who clicked, per query..."
t0 = time()
number_of_users_who_clicked = dict.fromkeys(big_queries_set - removed_queries, 0)
for query_dict in lpc.user_clicks_number:
if query_dict is None:
continue
for qid in query_dict:
number_of_users_who_clicked[qid] += 1
print "Done ", time()-t0
# # GC
big_queries_set = None
removed_queries = None
# print "Some reprocessing..."
# t0 = time()
# for user_queries_dic in lpc.user_clicks_number:
# if user_queries_dic is None:
# continue
# del user_queries_dic['_id']
# for q in removed_queries:
# try:
# del user_queries_dic[q]
# except KeyError:
# # key was not there? fine, we did not need to delete it then
# pass
# for user_queries_dic in lptpq.user_queries_number:
# if user_queries_dic is None:
# continue
# del user_queries_dic['_id']
# for q in removed_queries:
# try:
# del user_queries_dic[q]
# except KeyError:
# # key was not there? fine, we did not need to delete it then
# pass
print "Done ", time()-t0
print "Starting..."
t0 = time()
us.init(
lpc.user_clicks_number,
lptpq.user_queries_number,
clusters,
users_set,
number_of_users_who_queried,
number_of_users_who_clicked
)
print "Done ", time()-t0
# Note: At this point in the main() execution, the script takes ~2.5G of RAM.
print "Total initialization phase time:", time()-t_init
if stop_after_init:
return
print "Initializing users similarity computation phase..."
# Similarity computation benchmark:
t0 = time()
i = 0
global DATA_SET_SIZE
DATA_SET_SIZE = len(users_set)
# Note: a too small batch size will waste time respawning processes and re-generating the user_sim module cache
# but a too high batch size will kill mongodb and the computer's RAM (as 1 batch size unit is 1 user computed by
# the process and the process commits everything at once)
print "Generating sorted users set..."
print "Generating workers pool..."
p = Pool(processes=POOL_SIZE)
start_values = range(0, DATA_SET_SIZE, BATCH_SIZE)
print "Mapping (launching) pool to", len(start_values), "different start_values", start_values
t0 = time()
p.map(compute_user_sim_batch, start_values)
p.close()
p.join()
print "Workers finished in %.3f." % (time()-t0)
# for u in users_set:
# for u2 in users_set:
# i += 1
# try:
# us.sim(u, u2)
# except KeyError as err:
# print err
# key = err.args[0]
# print key, "in big_queries_set?", key in big_queries_set
# print key, "in removed_queries?", key in removed_queries
# print key, "in clusters?", key in clusters
# res = False
# for u_dict in lpc.user_clicks_number:
# if u_dict is not None:
# res |= (key in u_dict)
# print key, "in clicks?", res
# res = False
# for u_dict in lptpq.user_queries_number:
# if u_dict is not None:
# res |= (key in u_dict)
# print key, "in user_queries_number?", res
# if i % 10000 is 0:
# print i+1, "\t\tsim() calls in\t\t", time()-t0, "\t\taverage\t\t", (time()-t0)/float(i+1)
raw_input("Now what?")
def __init__(self, master=None, thetype="IPs"):
TK.Frame.__init__( self, master, bd="1p", relief="groove", )
self.top = self.winfo_toplevel()
self.grid(pady=3, padx=0)
self.app = TK.Frame(self)
self.showsettings = TK.IntVar()
row = 0
width = 0
row2 = 0
if thetype == "IPs":
row=0
row2=0
width=31
if thetype == "URLs":
row=6
row2=6
width=30
if thetype == "SPECs":
row=12
row2=12
width=34
self.app.grid(column=4, row=row, sticky="NW")
self.thetype=thetype
self.etext = TK.StringVar()
self.label = TK.Label(self, text=thetype)
self.label.grid(column=0, row=row, sticky='NW')
self.tbox = TK.Entry(self, textvariable=self.etext, width=width)
self.tbox.grid(column=1, row=row, sticky='NW')
self.tbox.bind('<Button-3>', self.eText)
self.tbox.bind("<Return>", self.RetKey)
self.tbox.bind('<Double-Button-1>', self.eTextclear)
self.tbox["background"] = "White"
self.tbox["foreground"] = "Black"
self.button1=TK.Button(self, text="Spawn", command=lambda: self.fire(self.sources, self.values, self.trigger, self.etext))
self.button1.grid(column=2, row=row, sticky = 'NW')
if (thetype != "SPECs"):
self.button2=TK.Button(self, text="BL", command=lambda: self.processIP())
self.button2.grid(column=3, row=row, sticky = 'NW')
self.cb_settings=TK.Checkbutton(self, variable=self.showsettings, onvalue=1, offvalue=0, command=lambda: self.showSettings(row))
self.cb_settings.grid(column=0, row=row2, pady=20, sticky = 'NW')
self.a = sources.sources()
self.IPdims = self.a.IPdimensions
self.URLdims = self.a.URLdimensions
self.SPECdims = self.a.SPECIALdimensions
self.showSettings(row)
if (thetype == "IPs"):
self.sources = self.a.ip.sources
self.trigger = self.a.ip.trigger
self.links = self.a.IPLinks
self.values = [[TK.IntVar() for x in xrange(len(self.sources[:]))]]
if path.isfile(self.a.IPSettingsfile) and path.getsize(self.a.IPSettingsfile) > 0:
persist = pload(open(self.a.IPSettingsfile, "rb"))
for x in xrange(len(persist)):
self.values[0][x].set(persist[x])
for x in xrange(0, len(self.sources[:])):
self.addCheckBox(self.sources[x][0], x)
self.ip_chb_define(self.sources, self.values, self.trigger, self.etext, self.links)
self.read = self.a.IPpath
self.blread = self.a.IPbl
if (thetype == "URLs"):
self.sources = self.a.url.sources
self.trigger = self.a.url.trigger
self.links = self.a.URLLinks
self.values = [[TK.IntVar() for x in xrange(len(self.sources[:]))]]
if path.isfile(self.a.URLSettingsfile) and path.getsize(self.a.URLSettingsfile) > 0:
persist = pload(open(self.a.URLSettingsfile, "rb"))
for x in xrange(len(persist)):
self.values[0][x].set(persist[x])
for x in xrange(0, len(self.sources[:])):
self.addCheckBox(self.sources[x][0], x)
self.ip_chb_define(self.sources, self.values, self.trigger, self.etext, self.links)
self.read = self.a.URLpath
self.blread = self.a.URLbl
if (thetype == "SPECs"):
self.sources = self.a.special.sources
self.trigger = self.a.special.trigger
self.links = self.a.SPECIALLinks
self.values = TK.IntVar()
for x in xrange(0, len(self.sources[:])):
self.addRadio(self.sources[x][0], x, x+1)
self.ip_chb_define(self.sources, self.values, self.trigger, self.etext, self.links)
self.update()