Python get_stats Examples

Example #1

File: test_tpms.py Project: COMBINE-lab/piquant

def test_get_stats_returns_correct_number_of_statistics():
    num_statistics = 5
    statistics = [_DummyStatistic(str(i), False)
                  for i in range(num_statistics)]

    tpms = _get_test_tpms()
    tp_tpms = _get_test_tp_tpms()

    stats = t.get_stats(tpms, tp_tpms, statistics)
    assert len(stats.columns) == num_statistics

Example #2

File: test_tpms.py Project: COMBINE-lab/piquant

def test_get_stats_calculates_correct_values():
    name1 = "dummy1"
    name2 = "dummy2"
    statistics = [_DummyStatistic(name1, False), _DummyStatistic(name2, True)]

    tpms = _get_test_tpms()
    tp_tpms = _get_test_tp_tpms()

    stats = t.get_stats(tpms, tp_tpms, statistics)
    assert stats[name1].ix[0] == len(tpms)
    assert stats[name2].ix[0] == len(tp_tpms)

Example #3

File: test_tpms.py Project: COMBINE-lab/piquant

def test_get_stats_returns_correct_column_names():
    name1 = "dummy1"
    name2 = "dummy2"
    statistics = [_DummyStatistic(name1, False), _DummyStatistic(name2, False)]

    tpms = _get_test_tpms()
    tp_tpms = _get_test_tp_tpms()

    stats = t.get_stats(tpms, tp_tpms, statistics)
    assert name1 in stats.columns
    assert name2 in stats.columns

Example #4

def test_get_stats_calculates_correct_values():
    name1 = "dummy1"
    name2 = "dummy2"
    statistics = [_DummyStatistic(name1, False), _DummyStatistic(name2, True)]

    tpms = _get_test_tpms()
    tp_tpms = _get_test_tp_tpms()

    stats = t.get_stats(tpms, tp_tpms, statistics)
    assert stats[name1].ix[0] == len(tpms)
    assert stats[name2].ix[0] == len(tp_tpms)

Example #5

def test_get_stats_returns_correct_column_names():
    name1 = "dummy1"
    name2 = "dummy2"
    statistics = [_DummyStatistic(name1, False), _DummyStatistic(name2, False)]

    tpms = _get_test_tpms()
    tp_tpms = _get_test_tp_tpms()

    stats = t.get_stats(tpms, tp_tpms, statistics)
    assert name1 in stats.columns
    assert name2 in stats.columns

Example #6

def test_get_stats_returns_correct_number_of_statistics():
    num_statistics = 5
    statistics = [
        _DummyStatistic(str(i), False) for i in range(num_statistics)
    ]

    tpms = _get_test_tpms()
    tp_tpms = _get_test_tp_tpms()

    stats = t.get_stats(tpms, tp_tpms, statistics)
    assert len(stats.columns) == num_statistics