def saveAs(self):
if self.clswidgets.cls is None:
return
fname = str(getSaveFileNameDialogWithDefaultSuffix(self, 'Save file', '', 'CLS data (*.cat)', 'cat'))
if len(fname) == 0:
return
self.saveFilename=fname
self.saveAction.setEnabled(True)
self._setWindowTitle()
return self._save()
def savePdf(self):
if self.clswidgets.cls is None:
return
# ask what to export: currently selected one or all CLS replicate groups
dialog=ClsWidgets.PdfDialog()
dialog.show()
if not dialog.exec_():
return
# ask for filename
fname = str(getSaveFileNameDialogWithDefaultSuffix(self, 'Save file', '', 'pdf (*.pdf)', 'pdf'))
if len(fname) == 0:
return
if dialog.currentOrAllRadios.checkedId() == 0:
# currently selected
elementaryIndices=[]
replicateGroupIndices=[]
select=self.clswidgets.currentViewSelectionAsDict()
addWellIdsToTitle=False
if select['row1'] is None:
replicateGroupIndices=[select['row0']]
else:
elementaryIndices=[self.clswidgets.cls.clsReplicateGroups[select['row0']].childWellIndices()[select['row1']]]
addWellIdsToTitle=True
platereader.clsplot.viabilitiesToPdf(self.clswidgets.cls,
fname,
showTitle=dialog.showTitle.checkState(),
addWellIdsToTitle=addWellIdsToTitle,
creator=os.path.basename(sys.argv[0]),
replicateGroupIndices=replicateGroupIndices,
elementaryIndices=elementaryIndices)
elif dialog.currentOrAllRadios.checkedId() == 1:
# all replicates
# create progress bar, do not allow to press buttons, etc
self._setupLongrunningCalculation('Saving figures',self.clswidgets.cls.numberOfNonBackgroundCls())
try:
platereader.clsplot.viabilitiesToPdf(self.clswidgets.cls,
fname,
showTitle=dialog.showTitle.checkState(),
creator=os.path.basename(sys.argv[0]),
replicateGroupIndices=[],
addWellIdsToTitle=False,progressCall=self._updateProgress)
except Exception as err:
exc_type, exc_value, exc_tb = sys.exc_info()
msg=str(err)+"\n"
if msg is None:
msg=''
for line in traceback.format_exception(exc_type, exc_value, exc_tb):
msg+=line
QtGui.QMessageBox.warning(self,'An error occurred',msg)
# clean up: remove progress bar, enable buttons etc
self._longrunningCalculationFinished()
else:
raise RuntimeError('PdfDialog: unknown selection')
def saveCsv(self):
if self.clswidgets.cls is None:
return
fname = str(getSaveFileNameDialogWithDefaultSuffix(self, 'Save file', '', 'csv (*.csv)', 'csv'))
if len(fname) == 0:
return
# create progress bar, do not allow to press buttons, etc
self._setupLongrunningCalculation('Saving table',len(self.clswidgets.cls.clsReplicateGroups))
# run the real calculation
try:
self.clswidgets.cls.survivalToCsv(fname,progressCall=self._updateProgress)
except Exception as err:
exc_type, exc_value, exc_tb = sys.exc_info()
msg=str(err)+"\n"
if msg is None:
msg=''
for line in traceback.format_exception(exc_type, exc_value, exc_tb):
msg+=line
QtGui.QMessageBox.warning(self,'An error occurred',msg)
# clean up: remove progress bar, enable buttons etc
self._longrunningCalculationFinished()