Python complex_figure Examples

Example #1

def main():
    with contexts.complex_figure('plots/melki_rates_combined.pdf',
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            right_label=True) as figure:
        melki_rate_plot(figure)
#        melki_rate_error_plot(figure)
#    melki_timecourses()
#    single_timecourse()
#    stupid_melki_timecourses()
    with contexts.complex_figure('plots/melki_fit_quality.pdf',
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM) as figure:
        melki_sample_timecourses(figure)

Example #2

File: depoly.py Project: mark-burnett/filament-dynamics

def main():
    with contexts.complex_figure(
            'plots/depoly.pdf',
            #            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=4 * 2.54,
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM) as figure:
        stacked_timecourses(figure)

Example #3

def main(filename='plots/copoly_results.pdf'):
    #    copoly_adp_only(filename)
    #    copoly_halftime_plot(filename)
    with contexts.complex_figure(
            filename, height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM) as figure:
        #        copoly_timecourse_plot(figure)
        copoly_adp_only(figure)

Example #4

File: non_be_melki.py Project: mark-burnett/filament-dynamics

def main():
    with contexts.complex_figure(
            'plots/melki_non_be_comparison.pdf',
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM * 2) as figure:
        non_be_rates(figure)
        non_be_quality(figure)

Example #5

File: copoly.py Project: mark-burnett/filament-dynamics

def main(filename='plots/copoly_results.pdf'):
#    copoly_adp_only(filename)
#    copoly_halftime_plot(filename)
    with contexts.complex_figure(filename,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM) as figure:
#        copoly_timecourse_plot(figure)
        copoly_adp_only(figure)

Example #6

File: fnc.py Project: mark-burnett/filament-dynamics

def main(filename='plots/fnc_lagtimes.pdf'):
    with contexts.complex_figure(filename,
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            ) as figure:
#        lagtime_plot(figure)
        linear_lagtime_plot(figure)

Example #7

File: crit_conc.py Project: mark-burnett/filament-dynamics

def main():
#    with contexts.complex_figure('plots/critical_concentration.pdf',
    with contexts.complex_figure('plots/cc_tip.pdf',
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM * 2) as figure:
#        crit_conc(figure)
        cc_tip(figure)

Example #8

def main():
    #    with contexts.complex_figure('plots/critical_concentration.pdf',
    with contexts.complex_figure(
            'plots/cc_tip.pdf',
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM * 2) as figure:
        #        crit_conc(figure)
        cc_tip(figure)

Example #9

File: fnc.py Project: mark-burnett/filament-dynamics

def main(filename='plots/fnc_lagtimes.pdf'):
    with contexts.complex_figure(
            filename,
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
    ) as figure:
        #        lagtime_plot(figure)
        linear_lagtime_plot(figure)

Example #10

File: pi_poly.py Project: mark-burnett/filament-dynamics

def main(filename='plots/pi_saturation.pdf'):
    with contexts.complex_figure(filename,
#            width=settings.DOUBLE_COLUMN_DEFAULT_WIDTH_CM,
#            height=settings.DOUBLE_COLUMN_DEFAULT_HEIGHT_CM
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM * 2,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM * 2) as figure:
#        timecourse_plot(figure)
#        asymptotic_plot(figure)
        halftime_plot(figure)

Example #11

File: melki.py Project: mark-burnett/filament-dynamics

def main():
    with contexts.complex_figure(
        "plots/melki_rates_combined.pdf",
        width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
        height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
        right_label=True,
    ) as figure:
        melki_rate_plot(figure)
    #        melki_rate_error_plot(figure)
    #    melki_timecourses()
    #    single_timecourse()
    #    stupid_melki_timecourses()
    with contexts.complex_figure(
        "plots/melki_fit_quality.pdf",
        width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
        height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
    ) as figure:
        melki_sample_timecourses(figure)

Example #12

File: pi_poly.py Project: mark-burnett/filament-dynamics

def main(filename='plots/pi_saturation.pdf'):
    with contexts.complex_figure(
            filename,
            #            width=settings.DOUBLE_COLUMN_DEFAULT_WIDTH_CM,
            #            height=settings.DOUBLE_COLUMN_DEFAULT_HEIGHT_CM
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM * 2,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM * 2) as figure:
        #        timecourse_plot(figure)
        #        asymptotic_plot(figure)
        halftime_plot(figure)

Example #13

File: non_be_melki.py Project: mark-burnett/filament-dynamics

def main():
    with contexts.complex_figure('plots/melki_non_be_comparison.pdf',
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM * 2) as figure:
        non_be_rates(figure)
        non_be_quality(figure)

Example #14

File: vec_tc.py Project: mark-burnett/filament-dynamics

def main():
    with contexts.complex_figure('plots/melki_vc_tc_comp.pdf',
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM) as figure:
        vec_tcs(figure)

Example #15

File: depoly.py Project: mark-burnett/filament-dynamics

def main():
    with contexts.complex_figure('plots/depoly.pdf',
#            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=4 * 2.54,
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM) as figure:
        stacked_timecourses(figure)

Example #16

File: vec_tc.py Project: mark-burnett/filament-dynamics

def main():
    with contexts.complex_figure(
            'plots/melki_vc_tc_comp.pdf',
            width=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM,
            height=settings.SINGLE_COLUMN_DEFAULT_SIZE_CM) as figure:
        vec_tcs(figure)