def simulations_GGP(lat,GGPmodel,Nsim,plot=True):
""" Gerenates four arrays that are directions (dec, inc), x and y equal area coordinates of rotated directions (x,y),
rotated directions (dec,inc), x and y equal area coordinates of rotated directions
input
- lat latitude you want generate the directions list
- GGPmodel: dictionary like GGP_QC96_GAD = {"g10" : -30, "g20" : 0.0, "g30" : 0.0, "sig10" : 3.0, "sig11": 3.0,
"sig20" : 1.3 , "sig21" : 4.3, "sig22" : 1.3, "alpha": 27.7, "beta": 1.0, "name":'QC96_GAD'}
- Nsim number of simulations you want
output:
lista_sim, lista_xy, lista_r, lista_xyr """
dec_r=180
pol=-GGPmodel['g10']/abs(GGPmodel['g10'])
if pol<0:
dec_r=0
lista_sim = dii_fromGGPmodels(Nsim,lat,GGPmodel)
m = psv.m_TAF(GGPmodel, lat)
Binc = np.rad2deg(np.arctan(m[2]/abs(m[0])))
lista_r = np.zeros(np.shape(lista_sim))
for j in range(len(lista_sim)):
lista_r[j,0],lista_r[j,1] = pmag.dotilt(lista_sim[j,0],lista_sim[j,1],dec_r,(90-Binc))
lista_xyr = np.zeros([len(lista_sim),2])
lista_xy = np.zeros([len(lista_sim),2])
for j in range(len(lista_sim)):
lista_xyr[j,0:2] = pmag.dimap(lista_r[j,0],lista_r[j,1])
lista_xy[j,0:2] = pmag.dimap(lista_sim[j,0],lista_sim[j,1])
if plot==True:
plot_syn_directions(lista_sim, lista_xy, lista_r, lista_xyr,GGPmodel['name'],lat)
return lista_sim, lista_xy, lista_r, lista_xyr
def plot_net():
Dcirc = np.arange(0, 361.)
Icirc = np.zeros(361, 'f')
Xcirc, Ycirc = [], []
for k in range(361):
XY = pmag.dimap(Dcirc[k], Icirc[k])
Xcirc.append(XY[0])
Ycirc.append(XY[1])
plt.plot(Xcirc, Ycirc, 'k')
# put on the tick marks
Xsym, Ysym = [], []
for I in range(10, 100, 10):
XY = pmag.dimap(0., I)
Xsym.append(XY[0])
Ysym.append(XY[1])
plt.plot(Xsym, Ysym, 'k+')
Xsym, Ysym = [], []
for I in range(10, 90, 10):
XY = pmag.dimap(90., I)
Xsym.append(XY[0])
Ysym.append(XY[1])
plt.plot(Xsym, Ysym, 'k+')
Xsym, Ysym = [], []
for I in range(10, 90, 10):
XY = pmag.dimap(180., I)
Xsym.append(XY[0])
Ysym.append(XY[1])
plt.plot(Xsym, Ysym, 'k+')
Xsym, Ysym = [], []
for I in range(10, 90, 10):
XY = pmag.dimap(270., I)
Xsym.append(XY[0])
Ysym.append(XY[1])
plt.plot(Xsym, Ysym, 'k+')
for D in range(0, 360, 10):
Xtick, Ytick = [], []
for I in range(4):
XY = pmag.dimap(D, I)
Xtick.append(XY[0])
Ytick.append(XY[1])
plt.plot(Xtick, Ytick, 'k')
plt.axis("equal")
plt.axis((-1.05, 1.05, -1.05, 1.05))
plt.tight_layout()
def main():
"""
NAME
di_eq.py
DESCRIPTION
converts dec, inc pairs to x,y pairs using equal area projection
NB: do only upper or lower hemisphere at a time: does not distinguish between up and down.
SYNTAX
di_eq.py [command line options] [< filename]
OPTIONS
-h prints help message and quits
-f FILE, input file
"""
out = ""
UP = 0
if '-h' in sys.argv:
print(main.__doc__)
sys.exit()
if '-f' in sys.argv:
ind = sys.argv.index('-f')
file = sys.argv[ind + 1]
DI = numpy.loadtxt(file, dtype=numpy.float)
else:
DI = numpy.loadtxt(sys.stdin,
dtype=numpy.float) # read from standard input
Ds = DI.transpose()[0]
Is = DI.transpose()[1]
if len(DI) > 1: #array of data
XY = pmag.dimap_V(Ds, Is)
for xy in XY:
print('%f %f' % (xy[0], xy[1]))
else: # single data point
XY = pmag.dimap(Ds, Is)
print('%f %f' % (XY[0], XY[1]))
def main():
"""
NAME
di_eq.py
DESCRIPTION
converts dec, inc pairs to x,y pairs using equal area projection
NB: do only upper or lower hemisphere at a time: does not distinguish between up and down.
SYNTAX
di_eq.py [command line options] [< filename]
OPTIONS
-h prints help message and quits
-f FILE, input file
"""
out=""
UP=0
if '-h' in sys.argv:
print main.__doc__
sys.exit()
if '-f' in sys.argv:
ind=sys.argv.index('-f')
file=sys.argv[ind+1]
DI=numpy.loadtxt(file,dtype=numpy.float)
else:
DI = numpy.loadtxt(sys.stdin,dtype=numpy.float) # read from standard input
Ds=DI.transpose()[0]
Is=DI.transpose()[1]
if len(DI)>1: #array of data
XY=pmag.dimap_V(Ds,Is)
for xy in XY:
print '%f %f'%(xy[0],xy[1])
else: # single data point
XY=pmag.dimap(Ds,Is)
print '%f %f'%(XY[0],XY[1])
def main():
"""
NAME
site_edit_magic.py
DESCRIPTION
makes equal area projections site by site
from pmag_specimens.txt file with
Fisher confidence ellipse using McFadden and McElhinny (1988)
technique for combining lines and planes
allows testing and reject specimens for bad orientations
SYNTAX
site_edit_magic.py [command line options]
OPTIONS
-h: prints help and quits
-f: specify pmag_specimen format file, default is pmag_specimens.txt
-fsa: specify er_samples.txt file
-exc: use existing pmag_criteria.txt file
-N: reset all sample flags to good
OUPUT
edited er_samples.txt file
"""
dir_path='.'
FIG={} # plot dictionary
FIG['eqarea']=1 # eqarea is figure 1
in_file='pmag_specimens.txt'
sampfile='er_samples.txt'
out_file=""
fmt,plot='svg',1
Crits=""
M,N=180.,1
repeat=''
renew=0
if '-h' in sys.argv:
print main.__doc__
sys.exit()
if '-WD' in sys.argv:
ind=sys.argv.index('-WD')
dir_path=sys.argv[ind+1]
if '-f' in sys.argv:
ind=sys.argv.index("-f")
in_file=sys.argv[ind+1]
if '-fsa' in sys.argv:
ind=sys.argv.index("-fsa")
sampfile=sys.argv[ind+1]
if '-exc' in sys.argv:
Crits,file_type=pmag.magic_read(dir_path+'/pmag_criteria.txt')
for crit in Crits:
if crit['pmag_criteria_code']=='DE-SPEC':
M=float(crit['specimen_mad'])
N=float(crit['specimen_n'])
if '-fmt' in sys.argv:
ind=sys.argv.index("-fmt")
fmt=sys.argv[ind+1]
if '-N' in sys.argv: renew=1
#
if in_file[0]!="/":in_file=dir_path+'/'+in_file
if sampfile[0]!="/":sampfile=dir_path+'/'+sampfile
crd='s'
Specs,file_type=pmag.magic_read(in_file)
if file_type!='pmag_specimens':
print ' bad pmag_specimen input file'
sys.exit()
Samps,file_type=pmag.magic_read(sampfile)
if file_type!='er_samples':
print ' bad er_samples input file'
sys.exit()
SO_methods=[]
for rec in Samps:
if 'sample_orientation_flag' not in rec.keys(): rec['sample_orientation_flag']='g'
if 'sample_description' not in rec.keys(): rec['sample_description']=''
if renew==1:
rec['sample_orientation_flag']='g'
description=rec['sample_description']
if '#' in description:
newdesc=""
c=0
while description[c]!='#' and c<len(description)-1: # look for first pound sign
newdesc=newdesc+description[c]
c+=1
while description[c]=='#':
c+=1# skip first set of pound signs
while description[c]!='#':c+=1 # find second set of pound signs
while description[c]=='#' and c<len(description)-1:c+=1 # skip second set of pound signs
while c<len(description)-1: # look for first pound sign
newdesc=newdesc+description[c]
c+=1
rec['sample_description']=newdesc # edit out old comment about orientations
if "magic_method_codes" in rec:
methlist=rec["magic_method_codes"]
for meth in methlist.split(":"):
if "SO" in meth.strip() and "SO-POM" not in meth.strip():
if meth.strip() not in SO_methods: SO_methods.append(meth.strip())
pmag.magic_write(sampfile,Samps,'er_samples')
SO_priorities=pmag.set_priorities(SO_methods,0)
sitelist=[]
for rec in Specs:
if rec['er_site_name'] not in sitelist: sitelist.append(rec['er_site_name'])
sitelist.sort()
EQ={}
EQ['eqarea']=1
pmagplotlib.plot_init(EQ['eqarea'],5,5)
k=0
while k<len(sitelist):
site=sitelist[k]
print site
data=[]
ThisSiteSpecs=pmag.get_dictitem(Specs,'er_site_name',site,'T')
ThisSiteSpecs=pmag.get_dictitem(ThisSiteSpecs,'specimen_tilt_correction','-1','T') # get all the unoriented data
for spec in ThisSiteSpecs:
if spec['specimen_mad']!="" and spec['specimen_n']!="" and float(spec['specimen_mad'])<=M and float(spec['specimen_n'])>=N:
# good spec, now get orientation....
redo,p=1,0
if len(SO_methods)<=1:
az_type=SO_methods[0]
orient=pmag.find_samp_rec(spec["er_sample_name"],Samps,az_type)
redo=0
while redo==1:
if p>=len(SO_priorities):
print "no orientation data for ",spec['er_sample_name']
orient["sample_azimuth"]=""
orient["sample_dip"]=""
redo=0
else:
az_type=SO_methods[SO_methods.index(SO_priorities[p])]
orient=pmag.find_samp_rec(spec["er_sample_name"],Samps,az_type)
if orient["sample_azimuth"] !="":
redo=0
p+=1
if orient['sample_azimuth']!="":
rec={}
for key in spec.keys():rec[key]=spec[key]
rec['dec'],rec['inc']=pmag.dogeo(float(spec['specimen_dec']),float(spec['specimen_inc']),float(orient['sample_azimuth']),float(orient['sample_dip']))
rec["tilt_correction"]='1'
crd='g'
rec['sample_azimuth']=orient['sample_azimuth']
rec['sample_dip']=orient['sample_dip']
data.append(rec)
if len(data)>2:
print 'specimen, dec, inc, n_meas/MAD,| method codes '
for i in range(len(data)):
print '%s: %7.1f %7.1f %s / %s | %s' % (data[i]['er_specimen_name'], data[i]['dec'], data[i]['inc'], data[i]['specimen_n'], data[i]['specimen_mad'], data[i]['magic_method_codes'])
fpars=pmag.dolnp(data,'specimen_direction_type')
print "\n Site lines planes kappa a95 dec inc"
print site, fpars["n_lines"], fpars["n_planes"], fpars["K"], fpars["alpha95"], fpars["dec"], fpars["inc"], fpars["R"]
if out_file!="":
if float(fpars["alpha95"])<=acutoff and float(fpars["K"])>=kcutoff:
out.write('%s %s %s\n'%(fpars["dec"],fpars['inc'],fpars['alpha95']))
pmagplotlib.plotLNP(EQ['eqarea'],site,data,fpars,'specimen_direction_type')
pmagplotlib.drawFIGS(EQ)
if k!=0 and repeat!='y':
ans=raw_input("s[a]ve plot, [q]uit, [e]dit specimens, [p]revious site, <return> to continue:\n ")
elif k==0 and repeat!='y':
ans=raw_input("s[a]ve plot, [q]uit, [e]dit specimens, <return> to continue:\n ")
if ans=="p": k-=2
if ans=="a":
files={}
files['eqarea']=site+'_'+crd+'_eqarea'+'.'+fmt
pmagplotlib.saveP(EQ,files)
if ans=="q": sys.exit()
if ans=="e" and Samps==[]:
print "can't edit samples without orientation file, sorry"
elif ans=="e":
# k-=1
testspec=raw_input("Enter name of specimen to check: ")
for spec in data:
if spec['er_specimen_name']==testspec:
# first test wrong direction of drill arrows (flip drill direction in opposite direction and re-calculate d,i
d,i=pmag.dogeo(float(spec['specimen_dec']),float(spec['specimen_inc']),float(spec['sample_azimuth'])-180.,-float(spec['sample_dip']))
XY=pmag.dimap(d,i)
pmagplotlib.plotXY(EQ['eqarea'],[XY[0]],[XY[1]],sym='g^')
# first test wrong end of compass (take az-180.)
d,i=pmag.dogeo(float(spec['specimen_dec']),float(spec['specimen_inc']),float(spec['sample_azimuth'])-180.,float(spec['sample_dip']))
XY=pmag.dimap(d,i)
pmagplotlib.plotXY(EQ['eqarea'],[XY[0]],[XY[1]],sym='kv')
# did the sample spin in the hole?
# now spin around specimen's z
X_up,Y_up,X_d,Y_d=[],[],[],[]
for incr in range(0,360,5):
d,i=pmag.dogeo(float(spec['specimen_dec'])+incr,float(spec['specimen_inc']),float(spec['sample_azimuth']),float(spec['sample_dip']))
XY=pmag.dimap(d,i)
if i>=0:
X_d.append(XY[0])
Y_d.append(XY[1])
else:
X_up.append(XY[0])
Y_up.append(XY[1])
pmagplotlib.plotXY(EQ['eqarea'],X_d,Y_d,sym='b.')
pmagplotlib.plotXY(EQ['eqarea'],X_up,Y_up,sym='c.')
pmagplotlib.drawFIGS(EQ)
break
print "Triangle: wrong arrow for drill direction."
print "Delta: wrong end of compass."
print "Small circle: wrong mark on sample. [cyan upper hemisphere]"
deleteme=raw_input("Mark this sample as bad? y/[n] ")
if deleteme=='y':
reason=raw_input("Reason: [1] broke, [2] wrong drill direction, [3] wrong compass direction, [4] bad mark, [5] displaced block [6] other ")
if reason=='1':
description=' sample broke while drilling'
if reason=='2':
description=' wrong drill direction '
if reason=='3':
description=' wrong compass direction '
if reason=='4':
description=' bad mark in field'
if reason=='5':
description=' displaced block'
if reason=='6':
description=raw_input('Enter brief reason for deletion: ')
for samp in Samps:
if samp['er_sample_name']==spec['er_sample_name']:
samp['sample_orientation_flag']='b'
samp['sample_description']=samp['sample_description']+' ## direction deleted because: '+description+'##' # mark description
pmag.magic_write(sampfile,Samps,'er_samples')
repeat=raw_input("Mark another sample, this site? y/[n] ")
if repeat=='y': k-=1
else:
print 'skipping site - not enough data with specified coordinate system'
k+=1
print "sample flags stored in ",sampfile
def main():
"""
NAME
site_edit_magic.py
DESCRIPTION
makes equal area projections site by site
from pmag_specimens.txt file with
Fisher confidence ellipse using McFadden and McElhinny (1988)
technique for combining lines and planes
allows testing and reject specimens for bad orientations
SYNTAX
site_edit_magic.py [command line options]
OPTIONS
-h: prints help and quits
-f: specify pmag_specimen format file, default is pmag_specimens.txt
-fsa: specify er_samples.txt file
-exc: use existing pmag_criteria.txt file
-N: reset all sample flags to good
OUPUT
edited er_samples.txt file
"""
dir_path = '.'
FIG = {} # plot dictionary
FIG['eqarea'] = 1 # eqarea is figure 1
in_file = 'pmag_specimens.txt'
sampfile = 'er_samples.txt'
out_file = ""
fmt, plot = 'svg', 1
Crits = ""
M, N = 180., 1
repeat = ''
renew = 0
if '-h' in sys.argv:
print(main.__doc__)
sys.exit()
if '-WD' in sys.argv:
ind = sys.argv.index('-WD')
dir_path = sys.argv[ind + 1]
if '-f' in sys.argv:
ind = sys.argv.index("-f")
in_file = sys.argv[ind + 1]
if '-fsa' in sys.argv:
ind = sys.argv.index("-fsa")
sampfile = sys.argv[ind + 1]
if '-exc' in sys.argv:
Crits, file_type = pmag.magic_read(dir_path + '/pmag_criteria.txt')
for crit in Crits:
if crit['pmag_criteria_code'] == 'DE-SPEC':
M = float(crit['specimen_mad'])
N = float(crit['specimen_n'])
if '-fmt' in sys.argv:
ind = sys.argv.index("-fmt")
fmt = sys.argv[ind + 1]
if '-N' in sys.argv: renew = 1
#
if in_file[0] != "/": in_file = dir_path + '/' + in_file
if sampfile[0] != "/": sampfile = dir_path + '/' + sampfile
crd = 's'
Specs, file_type = pmag.magic_read(in_file)
if file_type != 'pmag_specimens':
print(' bad pmag_specimen input file')
sys.exit()
Samps, file_type = pmag.magic_read(sampfile)
if file_type != 'er_samples':
print(' bad er_samples input file')
sys.exit()
SO_methods = []
for rec in Samps:
if 'sample_orientation_flag' not in list(rec.keys()):
rec['sample_orientation_flag'] = 'g'
if 'sample_description' not in list(rec.keys()):
rec['sample_description'] = ''
if renew == 1:
rec['sample_orientation_flag'] = 'g'
description = rec['sample_description']
if '#' in description:
newdesc = ""
c = 0
while description[c] != '#' and c < len(
description) - 1: # look for first pound sign
newdesc = newdesc + description[c]
c += 1
while description[c] == '#':
c += 1 # skip first set of pound signs
while description[c] != '#':
c += 1 # find second set of pound signs
while description[c] == '#' and c < len(description) - 1:
c += 1 # skip second set of pound signs
while c < len(description) - 1: # look for first pound sign
newdesc = newdesc + description[c]
c += 1
rec['sample_description'] = newdesc # edit out old comment about orientations
if "magic_method_codes" in rec:
methlist = rec["magic_method_codes"]
for meth in methlist.split(":"):
if "SO" in meth.strip() and "SO-POM" not in meth.strip():
if meth.strip() not in SO_methods:
SO_methods.append(meth.strip())
pmag.magic_write(sampfile, Samps, 'er_samples')
SO_priorities = pmag.set_priorities(SO_methods, 0)
sitelist = []
for rec in Specs:
if rec['er_site_name'] not in sitelist:
sitelist.append(rec['er_site_name'])
sitelist.sort()
EQ = {}
EQ['eqarea'] = 1
pmagplotlib.plot_init(EQ['eqarea'], 5, 5)
k = 0
while k < len(sitelist):
site = sitelist[k]
print(site)
data = []
ThisSiteSpecs = pmag.get_dictitem(Specs, 'er_site_name', site, 'T')
ThisSiteSpecs = pmag.get_dictitem(ThisSiteSpecs,
'specimen_tilt_correction', '-1',
'T') # get all the unoriented data
for spec in ThisSiteSpecs:
if spec['specimen_mad'] != "" and spec[
'specimen_n'] != "" and float(
spec['specimen_mad']) <= M and float(
spec['specimen_n']) >= N:
# good spec, now get orientation....
redo, p = 1, 0
if len(SO_methods) <= 1:
az_type = SO_methods[0]
orient = pmag.find_samp_rec(spec["er_sample_name"], Samps,
az_type)
redo = 0
while redo == 1:
if p >= len(SO_priorities):
print("no orientation data for ",
spec['er_sample_name'])
orient["sample_azimuth"] = ""
orient["sample_dip"] = ""
redo = 0
else:
az_type = SO_methods[SO_methods.index(
SO_priorities[p])]
orient = pmag.find_samp_rec(spec["er_sample_name"],
Samps, az_type)
if orient["sample_azimuth"] != "":
redo = 0
p += 1
if orient['sample_azimuth'] != "":
rec = {}
for key in list(spec.keys()):
rec[key] = spec[key]
rec['dec'], rec['inc'] = pmag.dogeo(
float(spec['specimen_dec']),
float(spec['specimen_inc']),
float(orient['sample_azimuth']),
float(orient['sample_dip']))
rec["tilt_correction"] = '1'
crd = 'g'
rec['sample_azimuth'] = orient['sample_azimuth']
rec['sample_dip'] = orient['sample_dip']
data.append(rec)
if len(data) > 2:
print('specimen, dec, inc, n_meas/MAD,| method codes ')
for i in range(len(data)):
print('%s: %7.1f %7.1f %s / %s | %s' %
(data[i]['er_specimen_name'], data[i]['dec'],
data[i]['inc'], data[i]['specimen_n'],
data[i]['specimen_mad'], data[i]['magic_method_codes']))
fpars = pmag.dolnp(data, 'specimen_direction_type')
print("\n Site lines planes kappa a95 dec inc")
print(site, fpars["n_lines"], fpars["n_planes"], fpars["K"],
fpars["alpha95"], fpars["dec"], fpars["inc"], fpars["R"])
if out_file != "":
if float(fpars["alpha95"]) <= acutoff and float(
fpars["K"]) >= kcutoff:
out.write('%s %s %s\n' %
(fpars["dec"], fpars['inc'], fpars['alpha95']))
pmagplotlib.plot_lnp(EQ['eqarea'], site, data, fpars,
'specimen_direction_type')
pmagplotlib.draw_figs(EQ)
if k != 0 and repeat != 'y':
ans = input(
"s[a]ve plot, [q]uit, [e]dit specimens, [p]revious site, <return> to continue:\n "
)
elif k == 0 and repeat != 'y':
ans = input(
"s[a]ve plot, [q]uit, [e]dit specimens, <return> to continue:\n "
)
if ans == "p": k -= 2
if ans == "a":
files = {}
files['eqarea'] = site + '_' + crd + '_eqarea' + '.' + fmt
pmagplotlib.save_plots(EQ, files)
if ans == "q": sys.exit()
if ans == "e" and Samps == []:
print("can't edit samples without orientation file, sorry")
elif ans == "e":
# k-=1
testspec = input("Enter name of specimen to check: ")
for spec in data:
if spec['er_specimen_name'] == testspec:
# first test wrong direction of drill arrows (flip drill direction in opposite direction and re-calculate d,i
d, i = pmag.dogeo(float(spec['specimen_dec']),
float(spec['specimen_inc']),
float(spec['sample_azimuth']) - 180.,
-float(spec['sample_dip']))
XY = pmag.dimap(d, i)
pmagplotlib.plot_xy(EQ['eqarea'], [XY[0]], [XY[1]],
sym='g^')
# first test wrong end of compass (take az-180.)
d, i = pmag.dogeo(float(spec['specimen_dec']),
float(spec['specimen_inc']),
float(spec['sample_azimuth']) - 180.,
float(spec['sample_dip']))
XY = pmag.dimap(d, i)
pmagplotlib.plot_xy(EQ['eqarea'], [XY[0]], [XY[1]],
sym='kv')
# did the sample spin in the hole?
# now spin around specimen's z
X_up, Y_up, X_d, Y_d = [], [], [], []
for incr in range(0, 360, 5):
d, i = pmag.dogeo(
float(spec['specimen_dec']) + incr,
float(spec['specimen_inc']),
float(spec['sample_azimuth']),
float(spec['sample_dip']))
XY = pmag.dimap(d, i)
if i >= 0:
X_d.append(XY[0])
Y_d.append(XY[1])
else:
X_up.append(XY[0])
Y_up.append(XY[1])
pmagplotlib.plot_xy(EQ['eqarea'], X_d, Y_d, sym='b.')
pmagplotlib.plot_xy(EQ['eqarea'], X_up, Y_up, sym='c.')
pmagplotlib.draw_figs(EQ)
break
print("Triangle: wrong arrow for drill direction.")
print("Delta: wrong end of compass.")
print(
"Small circle: wrong mark on sample. [cyan upper hemisphere]"
)
deleteme = input("Mark this sample as bad? y/[n] ")
if deleteme == 'y':
reason = input(
"Reason: [1] broke, [2] wrong drill direction, [3] wrong compass direction, [4] bad mark, [5] displaced block [6] other "
)
if reason == '1':
description = ' sample broke while drilling'
if reason == '2':
description = ' wrong drill direction '
if reason == '3':
description = ' wrong compass direction '
if reason == '4':
description = ' bad mark in field'
if reason == '5':
description = ' displaced block'
if reason == '6':
description = input(
'Enter brief reason for deletion: ')
for samp in Samps:
if samp['er_sample_name'] == spec['er_sample_name']:
samp['sample_orientation_flag'] = 'b'
samp['sample_description'] = samp[
'sample_description'] + ' ## direction deleted because: ' + description + '##' # mark description
pmag.magic_write(sampfile, Samps, 'er_samples')
repeat = input("Mark another sample, this site? y/[n] ")
if repeat == 'y': k -= 1
else:
print(
'skipping site - not enough data with specified coordinate system'
)
k += 1
print("sample flags stored in ", sampfile)
