Example #1
0
    def defineCharacteristicsFromFile(self):
        lines = open(self.descriptionFile)
        line = lines.readline().strip('\n').strip()
        self.name = line
        self.i18n_name = QCoreApplication.translate("TAUDEMAlgorithm", line)
        line = lines.readline().strip('\n').strip()
        self.cmdName = line
        line = lines.readline().strip('\n').strip()
        self.group = line
        self.i18n_group = QCoreApplication.translate("TAUDEMAlgorithm", line)

        line = lines.readline().strip('\n').strip()
        while line != '':
            try:
                line = line.strip('\n').strip()
                if line.startswith('Parameter'):
                    param = getParameterFromString(line)
                    self.addParameter(param)
                else:
                    self.addOutput(getOutputFromString(line))
                line = lines.readline().strip('\n').strip()
            except Exception as e:
                ProcessingLog.addToLog(ProcessingLog.LOG_ERROR,
                                       self.tr('Could not load TauDEM algorithm: %s\n%s' % (self.descriptionFile, line)))
                raise e
        lines.close()
Example #2
0
    def defineCharacteristicsFromFile(self):
        with codecs.open(self.descriptionFile, encoding='utf-8') as f:
            line = f.readline().strip('\n').strip()
            self.name = line
            self.i18n_name = self.tr(line)
            line = f.readline().strip('\n').strip()
            self.cmdName = line
            line = f.readline().strip('\n').strip()
            self.group = line
            self.i18n_group = self.tr(line)

            line = f.readline().strip('\n').strip()
            while line != '':
                try:
                    line = line.strip('\n').strip()
                    if line.startswith('Parameter'):
                        param = getParameterFromString(line)
                        self.addParameter(param)
                    else:
                        self.addOutput(getOutputFromString(line))
                    line = f.readline().strip('\n').strip()
                except Exception as e:
                    ProcessingLog.addToLog(ProcessingLog.LOG_ERROR,
                                           self.tr('Could not load TauDEM algorithm: {}\n{}'.format(self.descriptionFile, line)))
                    raise e
Example #3
0
 def defineCharacteristicsFromFile(self):
     lines = open(self.descriptionFile)
     line = lines.readline().strip('\n').strip()
     self.name = line
     if '|' in self.name:
         tokens = self.name.split('|')
         self.name = tokens[0]
         self.i18n_name = QCoreApplication.translate("SAGAAlgorithm", unicode(self.name))
         self.cmdname = tokens[1]
     else:
         self.cmdname = self.name
         self.i18n_name = QCoreApplication.translate("SAGAAlgorithm", unicode(self.name))
         self.name = self.name[0].upper() + self.name[1:].lower()
     line = lines.readline().strip('\n').strip()
     self.undecoratedGroup = line
     self.group = SagaGroupNameDecorator.getDecoratedName(self.undecoratedGroup)
     self.i18n_group = QCoreApplication.translate("SAGAAlgorithm", self.group)
     line = lines.readline().strip('\n').strip()
     while line != '':
         if line.startswith('Hardcoded'):
             self.hardcodedStrings.append(line[len('Harcoded|') + 1:])
         elif line.startswith('Parameter'):
             self.addParameter(getParameterFromString(line))
         elif line.startswith('AllowUnmatching'):
             self.allowUnmatchingGridExtents = True
         elif line.startswith('Extent'):
             # An extent parameter that wraps 4 SAGA numerical parameters
             self.extentParamNames = line[6:].strip().split(' ')
             self.addParameter(ParameterExtent(self.OUTPUT_EXTENT,
                               'Output extent', '0,1,0,1'))
         else:
             self.addOutput(getOutputFromString(line))
         line = lines.readline().strip('\n').strip()
     lines.close()
Example #4
0
    def processParameterLine(self, line):
        param = None
        line = line.replace('#', '')

        if line == "nomodeler":
            self._flags = self._flags | QgsProcessingAlgorithm.FlagHideFromModeler
            return
        if line == "nocrswarning":
            self.noCRSWarning = True
            return
        tokens = line.split('=', 1)
        desc = self.createDescriptiveName(tokens[0])
        if tokens[1].lower().strip() == 'group':
            self._group = tokens[0]
            return
        if tokens[1].lower().strip() == 'name':
            self._name = self._display_name = tokens[0]
            return

        out = getOutputFromString(line)
        if out is None:
            param = getParameterFromString(line)

        if param is not None:
            self.addParameter(param)
        elif out is not None:
            out.setName(tokens[0])
            out.setDescription(desc)
            self.addOutput(out)
        else:
            raise WrongScriptException(
                self.tr('Could not load script: {0}.\n'
                        'Problem with line "{1}"', 'ScriptAlgorithm').format(self.descriptionFile or '', line))
Example #5
0
 def defineCharacteristicsFromFile(self):
     lines = open(self.descriptionFile)
     line = lines.readline().strip("\n").strip()
     self.name = line
     if "|" in self.name:
         tokens = self.name.split("|")
         self.name = tokens[0]
         self.cmdname = tokens[1]
     else:
         self.cmdname = self.name
         self.name = self.name[0].upper() + self.name[1:].lower()
     line = lines.readline().strip("\n").strip()
     self.undecoratedGroup = line
     self.group = SagaGroupNameDecorator.getDecoratedName(self.undecoratedGroup)
     line = lines.readline().strip("\n").strip()
     while line != "":
         if line.startswith("Hardcoded"):
             self.hardcodedStrings.append(line[len("Harcoded|") + 1 :])
         elif line.startswith("Parameter"):
             self.addParameter(getParameterFromString(line))
         elif line.startswith("AllowUnmatching"):
             self.allowUnmatchingGridExtents = True
         elif line.startswith("Extent"):
             # An extent parameter that wraps 4 SAGA numerical parameters
             self.extentParamNames = line[6:].strip().split(" ")
             self.addParameter(ParameterExtent(self.OUTPUT_EXTENT, "Output extent", "0,1,0,1"))
         else:
             self.addOutput(getOutputFromString(line))
         line = lines.readline().strip("\n").strip()
     lines.close()
Example #6
0
    def defineCharacteristicsFromFile(self):
        lines = open(self.descriptionFile)
        line = lines.readline().strip("\n").strip()
        self.name = line
        line = lines.readline().strip("\n").strip()
        self.cmdName = line
        line = lines.readline().strip("\n").strip()
        self.group = line

        line = lines.readline().strip("\n").strip()
        while line != "":
            try:
                line = line.strip("\n").strip()
                if line.startswith("Parameter"):
                    param = getParameterFromString(line)
                    self.addParameter(param)
                else:
                    self.addOutput(getOutputFromString(line))
                line = lines.readline().strip("\n").strip()
            except Exception as e:
                ProcessingLog.addToLog(
                    ProcessingLog.LOG_ERROR,
                    self.tr("Could not load TauDEM algorithm: %s\n%s" % (self.descriptionFile, line)),
                )
                raise e
        lines.close()
Example #7
0
    def processParameterLine(self, line):
        param = None
        line = line.replace('#', '')

        if line == "nomodeler":
            self.showInModeler = False
            return
        if line == "nocrswarning":
            self.noCRSWarning = True
            return
        tokens = line.split('=', 1)
        desc = self.createDescriptiveName(tokens[0])
        if tokens[1].lower().strip() == 'group':
            self.group = self.i18n_group = tokens[0]
            return
        if tokens[1].lower().strip() == 'name':
            self.name = self.i18n_name = tokens[0]
            return

        out = getOutputFromString(line)
        if out is None:
            param = getParameterFromString(line)

        if param is not None:
            self.addParameter(param)
        elif out is not None:
            out.name = tokens[0]
            out.description = desc
            self.addOutput(out)
        else:
            raise WrongScriptException(
                self.tr('Could not load script: %s.\n'
                        'Problem with line "%s"', 'ScriptAlgorithm') % (self.descriptionFile or '', line))
Example #8
0
    def defineCharacteristicsFromFile(self):
        with open(self.descriptionFile) as lines:
            line = lines.readline().strip('\n').strip()
            self.name = line
            if '|' in self.name:
                tokens = self.name.split('|')
                self.name = tokens[0]
                #cmdname is the name of the algorithm in SAGA, that is, the name to use to call it in the console
                self.cmdname = tokens[1]

            else:
                self.cmdname = self.name
                self.i18n_name = QCoreApplication.translate("SAGAAlgorithm", str(self.name))
            #_commandLineName is the name used in processing to call the algorithm
            #Most of the time will be equal to the cmdname, but in same cases, several processing algorithms
            #call the same SAGA one
            self._commandLineName = self.createCommandLineName(self.name)
            self.name = decoratedAlgorithmName(self.name)
            self.i18n_name = QCoreApplication.translate("SAGAAlgorithm", str(self.name))
            line = lines.readline().strip('\n').strip()
            self.undecoratedGroup = line
            self.group = decoratedGroupName(self.undecoratedGroup)
            self.i18n_group = QCoreApplication.translate("SAGAAlgorithm", self.group)
            line = lines.readline().strip('\n').strip()
            while line != '':
                if line.startswith('Hardcoded'):
                    self.hardcodedStrings.append(line[len('Hardcoded|'):])
                elif line.startswith('Parameter'):
                    self.addParameter(getParameterFromString(line))
                elif line.startswith('AllowUnmatching'):
                    self.allowUnmatchingGridExtents = True
                elif line.startswith('NoResamplingChoice'):
                    self.noResamplingChoice = True
                elif line.startswith('Extent'):
                    # An extent parameter that wraps 4 SAGA numerical parameters
                    self.extentParamNames = line[6:].strip().split(' ')
                    self.addParameter(ParameterExtent(self.OUTPUT_EXTENT,
                                                      'Output extent'))
                else:
                    self.addOutput(getOutputFromString(line))
                line = lines.readline().strip('\n').strip()
            hasRaster = False
            for param in self.parameters:
                if (isinstance(param, ParameterRaster) or
                    (isinstance(param, ParameterMultipleInput)
                        and param.datatype == ParameterMultipleInput.TYPE_RASTER)):
                    hasRaster = True
                    break

            if (not self.noResamplingChoice and hasRaster):
                param = ParameterSelection(self.RESAMPLING, "Resampling method", ["Nearest Neighbour", "Bilinear Interpolation", "Bicubic Spline Interpolation", "B-Spline Interpolation"], 3)
                param.isAdvanced = True
                self.addParameter(param)
Example #9
0
 def processDescriptionParameterLine(self, line):
     try:
         if line.startswith('Parameter'):
             self.addParameter(getParameterFromString(line))
         elif line.startswith('*Parameter'):
             param = getParameterFromString(line[1:])
             param.isAdvanced = True
             self.addParameter(param)
         else:
             self.addOutput(getOutputFromString(line))
     except Exception:
         raise WrongScriptException(
             self.tr('Could not load script: %s.\n'
                     'Problem with line %d', 'ScriptAlgorithm') % (self.descriptionFile or '', line))
Example #10
0
    def defineCharacteristicsFromFile(self):
        with open(self.descriptionFile) as content:
            dom_model = ET.fromstring(content.read())

        self.appkey = dom_model.find("key").text
        self.cliName = dom_model.find("exec").text
        self.name = dom_model.find("longname").text
        self.i18n_name = QCoreApplication.translate("OTBAlgorithm", self.name)
        self.group = dom_model.find("group").text
        self.i18n_group = QCoreApplication.translate("OTBAlgorithm", self.group)

        rebu = None
        the_result = None

        try:
            rebu = self.get_list_from_node(dom_model)
            the_result = list(map(self.adapt_list_to_string, rebu))
        except Exception as e:
            ProcessingLog.addToLog(
                ProcessingLog.LOG_ERROR,
                self.tr("Could not open OTB algorithm: %s\n%s" % (self.descriptionFile, traceback.format_exc())),
            )
            raise e

        for line in the_result:
            try:
                if line.startswith("Parameter") or line.startswith("*Parameter"):
                    if line.startswith("*Parameter"):
                        param = getParameterFromString(line[1:])
                        param.isAdvanced = True
                    else:
                        param = getParameterFromString(line)
                    # Hack for initializing the elevation parameters from Processing configuration
                    if param.name == "-elev.dem.path" or param.name == "-elev.dem" or "elev.dem" in param.name:
                        param.default = OTBUtils.otbSRTMPath()
                    elif param.name == "-elev.dem.geoid" or param.name == "-elev.geoid" or "elev.geoid" in param.name:
                        param.default = OTBUtils.otbGeoidPath()
                    self.addParameter(param)
                elif line.startswith("Extent"):
                    self.addParameter(ParameterExtent(self.REGION_OF_INTEREST, "Region of interest", "0,1,0,1"))
                    self.hasROI = True
                else:
                    self.addOutput(getOutputFromString(line))
            except Exception as e:
                ProcessingLog.addToLog(
                    ProcessingLog.LOG_ERROR,
                    self.tr("Could not open OTB algorithm: %s\n%s" % (self.descriptionFile, line)),
                )
                raise e
Example #11
0
 def processDescriptionParameterLine(self, line):
     try:
         if line.startswith('Parameter'):
             self.addParameter(getParameterFromString(line))
         elif line.startswith('*Parameter'):
             param = getParameterFromString(line[1:])
             param.isAdvanced = True
             self.addParameter(param)
         else:
             self.addOutput(getOutputFromString(line))
     except Exception:
         raise WrongScriptException('Could not load script:'
                                    + self.descriptionFile or ''
                                    + '.\n Problem with line "' + line + '"'
                                    )
Example #12
0
 def defineCharacteristicsFromFile(self):
     lines = open(self.descriptionFile)
     line = lines.readline().strip('\n').strip()
     self.grassName = line
     line = lines.readline().strip('\n').strip()
     self.name = line
     self.i18n_name = QCoreApplication.translate("GrassAlgorithm", line)
     if " - " not in self.name:
         self.name = self.grassName + " - " + self.name
         self.i18n_name = self.grassName + " - " + self.i18n_name
     line = lines.readline().strip('\n').strip()
     self.group = line
     self.i18n_group = QCoreApplication.translate("GrassAlgorithm", line)
     hasRasterOutput = False
     hasVectorInput = False
     vectorOutputs = 0
     line = lines.readline().strip('\n').strip()
     while line != '':
         try:
             line = line.strip('\n').strip()
             if line.startswith('Parameter'):
                 parameter = getParameterFromString(line)
                 self.addParameter(parameter)
                 if isinstance(parameter, ParameterVector):
                     hasVectorInput = True
                 if isinstance(parameter, ParameterMultipleInput) \
                    and parameter.datatype < 3:
                     hasVectorInput = True
             elif line.startswith('*Parameter'):
                 param = getParameterFromString(line[1:])
                 param.isAdvanced = True
                 self.addParameter(param)
             else:
                 output = getOutputFromString(line)
                 self.addOutput(output)
                 if isinstance(output, OutputRaster):
                     hasRasterOutput = True
                 elif isinstance(output, OutputVector):
                     vectorOutputs += 1
                 if isinstance(output, OutputHTML):
                     self.addOutput(OutputFile("rawoutput", output.description +
                                               " (raw output)", "txt"))
             line = lines.readline().strip('\n').strip()
         except Exception, e:
             ProcessingLog.addToLog(
                 ProcessingLog.LOG_ERROR,
                 self.tr('Could not open GRASS algorithm: %s.\n%s' % (self.descriptionFile, line)))
             raise e
Example #13
0
def processCommand(alg):
    # We need to remove all outputs
    basename = getOutputFromString('OutputRaster|output|Output basename')
    basename.value = 'output'
    alg.addOutput(basename)
    outputNames = ['output_{}'.format(f) for f in ['red', 'green', 'blue']]
    outputs = [alg.getOutputFromName(f) for f in outputNames]
    for output in outputNames:
        alg.exportedLayers[alg.getOutputValue(output)] = 'output' + alg.uniqueSufix
        alg.removeOutputFromName(output)

    alg.processCommand()

    # And to re-add them
    alg.removeOutputFromName('output')
    for output in outputs:
        alg.addOutput(output)
Example #14
0
def processCommand(alg):
    # We need to remove all outputs
    basename = getOutputFromString("OutputRaster|output|Output basename")
    basename.value = "output"
    alg.addOutput(basename)
    outputNames = ["output_{}".format(f) for f in ["red", "green", "blue"]]
    outputs = [alg.getOutputFromName(f) for f in outputNames]
    for output in outputNames:
        alg.exportedLayers[alg.getOutputValue(output)] = "output" + alg.uniqueSufix
        alg.removeOutputFromName(output)

    alg.processCommand()

    # And to re-add them
    alg.removeOutputFromName("output")
    for output in outputs:
        alg.addOutput(output)
Example #15
0
    def defineCharacteristicsFromFile(self):
        lines = open(self.descriptionFile)
        line = lines.readline().strip('\n').strip()
        self.name = line
        if '|' in self.name:
            tokens = self.name.split('|')
            self.name = tokens[0]
            #cmdname is the name of the algorithm in SAGA, that is, the name to use to call it in the console
            self.cmdname = tokens[1]

        else:
            self.cmdname = self.name
            self.i18n_name = QCoreApplication.translate(
                "SAGAAlgorithm", str(self.name))
        #_commandLineName is the name used in processing to call the algorithm
        #Most of the time will be equal to the cmdname, but in same cases, several processing algorithms
        #call the same SAGA one
        self._commandLineName = self.createCommandLineName(self.name)
        self.name = decoratedAlgorithmName(self.name)
        self.i18n_name = QCoreApplication.translate("SAGAAlgorithm",
                                                    str(self.name))
        line = lines.readline().strip('\n').strip()
        self.undecoratedGroup = line
        self.group = decoratedGroupName(self.undecoratedGroup)
        self.i18n_group = QCoreApplication.translate("SAGAAlgorithm",
                                                     self.group)
        line = lines.readline().strip('\n').strip()
        while line != '':
            if line.startswith('Hardcoded'):
                self.hardcodedStrings.append(line[len('Hardcoded|'):])
            elif line.startswith('Parameter'):
                self.addParameter(getParameterFromString(line))
            elif line.startswith('AllowUnmatching'):
                self.allowUnmatchingGridExtents = True
            elif line.startswith('Extent'):
                # An extent parameter that wraps 4 SAGA numerical parameters
                self.extentParamNames = line[6:].strip().split(' ')
                self.addParameter(
                    ParameterExtent(self.OUTPUT_EXTENT, 'Output extent'))
            else:
                self.addOutput(getOutputFromString(line))
            line = lines.readline().strip('\n').strip()
        lines.close()
Example #16
0
    def defineCharacteristicsFromFile(self):
        with open(self.descriptionFile) as lines:
            line = lines.readline().strip('\n').strip()
            self._name = line
            if '|' in self._name:
                tokens = self._name.split('|')
                self._name = tokens[0]
                # cmdname is the name of the algorithm in SAGA, that is, the name to use to call it in the console
                self.cmdname = tokens[1]

            else:
                self.cmdname = self._name
                self._display_name = QCoreApplication.translate(
                    "SAGAAlgorithm", str(self._name))
            self._name = decoratedAlgorithmName(self._name)
            self._display_name = QCoreApplication.translate(
                "SAGAAlgorithm", str(self._name))

            self._name = self._name.lower()
            validChars = \
                'abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789:'
            self._name = ''.join(c for c in self._name if c in validChars)

            line = lines.readline().strip('\n').strip()
            self.undecoratedGroup = line
            self._group = QCoreApplication.translate(
                "SAGAAlgorithm", decoratedGroupName(self.undecoratedGroup))
            line = lines.readline().strip('\n').strip()
            while line != '':
                if line.startswith('Hardcoded'):
                    self.hardcodedStrings.append(line[len('Hardcoded|'):])
                elif line.startswith('Parameter'):
                    self.addParameter(getParameterFromString(line))
                elif line.startswith('AllowUnmatching'):
                    self.allowUnmatchingGridExtents = True
                elif line.startswith('Extent'):
                    # An extent parameter that wraps 4 SAGA numerical parameters
                    self.extentParamNames = line[6:].strip().split(' ')
                    self.addParameter(
                        ParameterExtent(self.OUTPUT_EXTENT, 'Output extent'))
                else:
                    self.addOutput(getOutputFromString(line))
                line = lines.readline().strip('\n').strip()
Example #17
0
    def processParameterLine(self, line):
        param = None
        line = line.replace('#', '')
        if line.lower().strip().startswith('showplots'):
            self.showPlots = True
            self.addOutput(OutputHTML(RAlgorithm.RPLOTS, 'R Plots'))
            return
        if line.lower().strip().startswith('dontuserasterpackage'):
            self.useRasterPackage = False
            return
        if line.lower().strip().startswith('passfilenames'):
            self.passFileNames = True
            return
        tokens = line.split('=')
        desc = self.createDescriptiveName(tokens[0])
        if tokens[1].lower().strip() == 'group':
            self._group = tokens[0]
            return
        if tokens[1].lower().strip() == 'name':
            self._name = self._display_name = tokens[0]
            self._name = self._name.lower()
            validChars = \
                'abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789:'
            self._name = ''.join(c for c in self._name if c in validChars)
            return

        out = getOutputFromString(line)
        if out is None:
            param = getParameterFromString(line)

        if param is not None:
            self.addParameter(param)
        elif out is not None:
            out.name = tokens[0]
            out.description = desc
            self.addOutput(out)
        else:
            raise WrongScriptException(
                self.tr('Could not load script: {0}.\n'
                        'Problem with line "{1}"', 'ScriptAlgorithm').format(self.descriptionFile or '', line))

            raise WrongScriptException(
                self.tr('Could not load R script: {0}.\n Problem with line {1}').format(self.descriptionFile, line))
Example #18
0
    def processParameterLine(self, line):
        param = None
        line = line.replace('#', '')
        if line.lower().strip().startswith('showplots'):
            self.showPlots = True
            self.addOutput(OutputHTML(RAlgorithm.RPLOTS, 'R Plots'))
            return
        if line.lower().strip().startswith('dontuserasterpackage'):
            self.useRasterPackage = False
            return
        if line.lower().strip().startswith('passfilenames'):
            self.passFileNames = True
            return
        tokens = line.split('=')
        desc = self.createDescriptiveName(tokens[0])
        if tokens[1].lower().strip() == 'group':
            self.group = self.i18n_group = tokens[0]
            return
        if tokens[1].lower().strip() == 'name':
            self.name = self.i18n_name = tokens[0]
            return

        out = getOutputFromString(line)
        if out is None:
            param = getParameterFromString(line)

        if param is not None:
            self.addParameter(param)
        elif out is not None:
            out.name = tokens[0]
            out.description = desc
            self.addOutput(out)
        else:
            raise WrongScriptException(
                self.tr(
                    'Could not load script: {0}.\n'
                    'Problem with line "{1}"',
                    'ScriptAlgorithm').format(self.descriptionFile or '',
                                              line))

            raise WrongScriptException(
                self.tr('Could not load R script: {0}.\n Problem with line {1}'
                        ).format(self.descriptionFile, line))
Example #19
0
    def processParameterLine(self, line):
        param = None
        line = line.replace('#', '')
        if line.lower().strip().startswith('showplots'):
            self.showPlots = True
            self.addOutput(OutputHTML(RAlgorithm.RPLOTS, 'R Plots'))
            return
        if line.lower().strip().startswith('dontuserasterpackage'):
            self.useRasterPackage = False
            return
        if line.lower().strip().startswith('passfilenames'):
            self.passFileNames = True
            return
        tokens = line.split('=')
        desc = self.createDescriptiveName(tokens[0])
        if tokens[1].lower().strip() == 'group':
            self._group = tokens[0]
            return
        if tokens[1].lower().strip() == 'name':
            self._name = self._display_name = tokens[0]
            self._name = self._name.lower()
            validChars = \
                'abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789:'
            self._name = ''.join(c for c in self._name if c in validChars)
            return

        out = getOutputFromString(line)
        if out is None:
            param = getParameterFromString(line)

        if param is not None:
            self.addParameter(param)
        elif out is not None:
            out.name = tokens[0]
            out.description = desc
            self.addOutput(out)
        else:
            raise WrongScriptException(
                self.tr('Could not load script: {0}.\n'
                        'Problem with line "{1}"', 'ScriptAlgorithm').format(self.descriptionFile or '', line))

            raise WrongScriptException(
                self.tr('Could not load R script: {0}.\n Problem with line {1}').format(self.descriptionFile, line))
Example #20
0
    def defineCharacteristicsFromFile(self):
        lines = open(self.descriptionFile)
        line = lines.readline().strip('\n').strip()
        self.name = line
        line = lines.readline().strip('\n').strip()
        self.cmdName = line
        line = lines.readline().strip('\n').strip()
        self.group = line

        line = lines.readline().strip('\n').strip()
        while line != '':
            try:
                line = line.strip('\n').strip()
                if line.startswith('Parameter'):
                    param = getParameterFromString(line)
                    self.addParameter(param)
                else:
                    self.addOutput(getOutputFromString(line))
                line = lines.readline().strip('\n').strip()
Example #21
0
    def processParameterLine(self, line):
        param = None
        line = line.replace("#", "")
        if line.lower().strip().startswith("showplots"):
            self.showPlots = True
            self.addOutput(OutputHTML(RAlgorithm.RPLOTS, "R Plots"))
            return
        if line.lower().strip().startswith("dontuserasterpackage"):
            self.useRasterPackage = False
            return
        if line.lower().strip().startswith("passfilenames"):
            self.passFileNames = True
            return
        tokens = line.split("=")
        desc = self.createDescriptiveName(tokens[0])
        if tokens[1].lower().strip() == "group":
            self.group = self.i18n_group = tokens[0]
            return
        if tokens[1].lower().strip() == "name":
            self.name = self.i18n_name = tokens[0]
            return

        out = getOutputFromString(line)
        if out is None:
            param = getParameterFromString(line)

        if param is not None:
            self.addParameter(param)
        elif out is not None:
            out.name = tokens[0]
            out.description = desc
            self.addOutput(out)
        else:
            raise WrongScriptException(
                self.tr("Could not load script: %s.\n" 'Problem with line "%s"', "ScriptAlgorithm")
                % (self.descriptionFile or "", line)
            )

            raise WrongScriptException(
                self.tr("Could not load R script: %s.\n Problem with line %s" % (self.descriptionFile, line))
            )
Example #22
0
 def defineCharacteristicsFromFile(self):
     lines = open(self.descriptionFile)
     line = lines.readline().strip('\n').strip()
     self.grassName = line
     line = lines.readline().strip('\n').strip()
     self.name = line
     line = lines.readline().strip('\n').strip()
     self.group = line
     hasRasterOutput = False
     hasVectorInput = False
     vectorOutputs = 0
     line = lines.readline().strip('\n').strip()
     while line != '':
         try:
             line = line.strip('\n').strip()
             if line.startswith('Parameter'):
                 parameter = getParameterFromString(line)
                 self.addParameter(parameter)
                 if isinstance(parameter, ParameterVector):
                     hasVectorInput = True
                 if isinstance(parameter, ParameterMultipleInput) \
                    and parameter.datatype < 3:
                     hasVectorInput = True
             elif line.startswith('*Parameter'):
                 param = getParameterFromString(line[1:])
                 param.isAdvanced = True
                 self.addParameter(param)
             else:
                 output = getOutputFromString(line)
                 self.addOutput(output)
                 if isinstance(output, OutputRaster):
                     hasRasterOutput = True
                 elif isinstance(output, OutputVector):
                     vectorOutputs += 1
             line = lines.readline().strip('\n').strip()
         except Exception, e:
             ProcessingLog.addToLog(
                 ProcessingLog.LOG_ERROR,
                 self.tr('Could not open GRASS algorithm: %s.\n%s' %
                         (self.descriptionFile, line)))
             raise e
Example #23
0
 def defineCharacteristicsFromFile(self):
     lines = open(self.descriptionFile)
     line = lines.readline().strip('\n').strip()
     self.grassName = line
     line = lines.readline().strip('\n').strip()
     self.name = line
     line = lines.readline().strip('\n').strip()
     self.group = line
     hasRasterOutput = False
     hasVectorInput = False
     vectorOutputs = 0
     line = lines.readline().strip('\n').strip()
     while line != '':
         try:
             line = line.strip('\n').strip()
             if line.startswith('Parameter'):
                 parameter = getParameterFromString(line)
                 self.addParameter(parameter)
                 if isinstance(parameter, ParameterVector):
                     hasVectorInput = True
                 if isinstance(parameter, ParameterMultipleInput) \
                    and parameter.datatype < 3:
                     hasVectorInput = True
             elif line.startswith('*Parameter'):
                 param = getParameterFromString(line[1:])
                 param.isAdvanced = True
                 self.addParameter(param)
             else:
                 output = getOutputFromString(line)
                 self.addOutput(output)
                 if isinstance(output, OutputRaster):
                     hasRasterOutput = True
                 elif isinstance(output, OutputVector):
                     vectorOutputs += 1
             line = lines.readline().strip('\n').strip()
         except Exception, e:
             ProcessingLog.addToLog(
                 ProcessingLog.LOG_ERROR,
                 self.tr('Could not open GRASS GIS 7 algorithm: %s\n%s' % (self.descriptionFile, line)))
             raise e
Example #24
0
    def defineCharacteristicsFromFile(self):
        with open(self.descriptionFile) as lines:
            line = lines.readline().strip('\n').strip()
            self._name = line
            if '|' in self._name:
                tokens = self._name.split('|')
                self._name = tokens[0]
                # cmdname is the name of the algorithm in SAGA, that is, the name to use to call it in the console
                self.cmdname = tokens[1]

            else:
                self.cmdname = self._name
                self._display_name = QCoreApplication.translate("SAGAAlgorithm", str(self._name))
            self._name = decoratedAlgorithmName(self._name)
            self._display_name = QCoreApplication.translate("SAGAAlgorithm", str(self._name))

            self._name = self._name.lower()
            validChars = \
                'abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789:'
            self._name = ''.join(c for c in self._name if c in validChars)

            line = lines.readline().strip('\n').strip()
            self.undecoratedGroup = line
            self._group = QCoreApplication.translate("SAGAAlgorithm", decoratedGroupName(self.undecoratedGroup))
            line = lines.readline().strip('\n').strip()
            while line != '':
                if line.startswith('Hardcoded'):
                    self.hardcodedStrings.append(line[len('Hardcoded|'):])
                elif line.startswith('Parameter'):
                    self.addParameter(getParameterFromString(line))
                elif line.startswith('AllowUnmatching'):
                    self.allowUnmatchingGridExtents = True
                elif line.startswith('Extent'):
                    # An extent parameter that wraps 4 SAGA numerical parameters
                    self.extentParamNames = line[6:].strip().split(' ')
                    self.addParameter(ParameterExtent(self.OUTPUT_EXTENT,
                                                      'Output extent'))
                else:
                    self.addOutput(getOutputFromString(line))
                line = lines.readline().strip('\n').strip()
Example #25
0
    def defineCharacteristicsFromFile(self):
        lines = open(self.descriptionFile)
        line = lines.readline().strip('\n').strip()
        self.name = line
        if '|' in self.name:
            tokens = self.name.split('|')
            self.name = tokens[0]
            #cmdname is the name of the algorithm in SAGA, that is, the name to use to call it in the console
            self.cmdname = tokens[1]

        else:
            self.cmdname = self.name
            self.i18n_name = QCoreApplication.translate("SAGAAlgorithm", unicode(self.name))
        #_commandLineName is the name used in processing to call the algorithm
        #Most of the time will be equal to the cmdname, but in same cases, several processing algorithms
        #call the same SAGA one
        self._commandLineName = self.createCommandLineName(self.name)
        self.name = decoratedAlgorithmName(self.name)
        self.i18n_name = QCoreApplication.translate("SAGAAlgorithm", unicode(self.name))
        line = lines.readline().strip('\n').strip()
        self.undecoratedGroup = line
        self.group = decoratedGroupName(self.undecoratedGroup)
        self.i18n_group = QCoreApplication.translate("SAGAAlgorithm", self.group)
        line = lines.readline().strip('\n').strip()
        while line != '':
            if line.startswith('Hardcoded'):
                self.hardcodedStrings.append(line[len('Hardcoded|'):])
            elif line.startswith('Parameter'):
                self.addParameter(getParameterFromString(line))
            elif line.startswith('AllowUnmatching'):
                self.allowUnmatchingGridExtents = True
            elif line.startswith('Extent'):
                # An extent parameter that wraps 4 SAGA numerical parameters
                self.extentParamNames = line[6:].strip().split(' ')
                self.addParameter(ParameterExtent(self.OUTPUT_EXTENT,
                                                  'Output extent', ''))
            else:
                self.addOutput(getOutputFromString(line))
            line = lines.readline().strip('\n').strip()
        lines.close()
Example #26
0
    def processParameterLine(self, line):
        param = None
        line = line.replace('#', '')
        if line.lower().strip().startswith('showplots'):
            self.showPlots = True
            self.addOutput(OutputHTML(RAlgorithm.RPLOTS, 'R Plots'))
            return
        if line.lower().strip().startswith('dontuserasterpackage'):
            self.useRasterPackage = False
            return
        if line.lower().strip().startswith('passfilenames'):
            self.passFileNames = True
            return
        tokens = line.split('=')
        desc = self.createDescriptiveName(tokens[0])
        if tokens[1].lower().strip() == 'group':
            self.group = self.i18n_group = tokens[0]
            return
        if tokens[1].lower().strip() == 'name':
            self.name = self.i18n_name = tokens[0]
            return

        out = getOutputFromString(line)
        if out is None:
            param = getParameterFromString(line)

        if param is not None:
            self.addParameter(param)
        elif out is not None:
            out.name = tokens[0]
            out.description = desc
            self.addOutput(out)
        else:
            raise WrongScriptException(
                self.tr('Could not load script: %s.\n'
                        'Problem with line "%s"', 'ScriptAlgorithm') % (self.descriptionFile or '', line))

            raise WrongScriptException(
                self.tr('Could not load R script: %s.\n Problem with line %s' % (self.descriptionFile, line)))
Example #27
0
 def defineCharacteristicsFromFile(self):
     lines = open(self.descriptionFile)
     line = lines.readline().strip('\n').strip()
     self.name = line
     if '|' in self.name:
         tokens = self.name.split('|')
         self.name = tokens[0]
         self.i18n_name = QCoreApplication.translate(
             "SAGAAlgorithm", unicode(self.name))
         self.cmdname = tokens[1]
     else:
         self.cmdname = self.name
         self.i18n_name = QCoreApplication.translate(
             "SAGAAlgorithm", unicode(self.name))
         self.name = self.name[0].upper() + self.name[1:].lower()
     line = lines.readline().strip('\n').strip()
     self.undecoratedGroup = line
     self.group = SagaGroupNameDecorator.getDecoratedName(
         self.undecoratedGroup)
     self.i18n_group = QCoreApplication.translate("SAGAAlgorithm",
                                                  self.group)
     line = lines.readline().strip('\n').strip()
     while line != '':
         if line.startswith('Hardcoded'):
             self.hardcodedStrings.append(line[len('Hardcoded|'):])
         elif line.startswith('Parameter'):
             self.addParameter(getParameterFromString(line))
         elif line.startswith('AllowUnmatching'):
             self.allowUnmatchingGridExtents = True
         elif line.startswith('Extent'):
             # An extent parameter that wraps 4 SAGA numerical parameters
             self.extentParamNames = line[6:].strip().split(' ')
             self.addParameter(
                 ParameterExtent(self.OUTPUT_EXTENT, 'Output extent',
                                 '0,1,0,1'))
         else:
             self.addOutput(getOutputFromString(line))
         line = lines.readline().strip('\n').strip()
     lines.close()
Example #28
0
    def processParameterLine(self, line):
        param = None
        line = line.replace('#', '')

        if line == "nomodeler":
            self._flags = self._flags | QgsProcessingAlgorithm.FlagHideFromModeler
            return
        if line == "nocrswarning":
            self.noCRSWarning = True
            return
        tokens = line.split('=', 1)
        desc = self.createDescriptiveName(tokens[0])
        if tokens[1].lower().strip() == 'group':
            self._group = tokens[0]
            validChars = 'abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789:'
            self._groupId = ''.join(c for c in tokens[0].lower()
                                    if c in validChars)
            return
        if tokens[1].lower().strip() == 'name':
            self._name = self._display_name = tokens[0]
            return

        out = getOutputFromString(line)
        if out is None:
            param = getParameterFromString(line)

        if param is not None:
            self.addParameter(param)
        elif out is not None:
            out.setName(tokens[0])
            out.setDescription(desc)
            self.addOutput(out)
        else:
            raise WrongScriptException(
                self.tr(
                    'Could not load script: {0}.\n'
                    'Problem with line "{1}"',
                    'ScriptAlgorithm').format(self.descriptionFile or '',
                                              line))
Example #29
0
 def defineCharacteristicsFromFile(self):
     lines = open(self.descriptionFile)
     line = lines.readline().strip('\n').strip()
     self.name = line
     line = lines.readline().strip('\n').strip()
     self.cmdName = line
     line = lines.readline().strip('\n').strip()
     self.group = line
     while line != '':
         try:
             line = line.strip('\n').strip()
             if line.startswith('Parameter'):
                 param = getParameterFromString(line)
                 self.addParameter(param)
             else:
                 self.addOutput(getOutputFromString(line))
             line = lines.readline().strip('\n').strip()
         except Exception, e:
             ProcessingLog.addToLog(ProcessingLog.LOG_ERROR,
                                    'Could not load TauDEM algorithm: '
                                    + self.descriptionFile + '\n' + line)
             raise e
 def defineCharacteristicsFromFile(self):
     lines = open(self.descriptionFile)
     line = lines.readline().strip("\n").strip()
     self.operator = line
     line = lines.readline().strip("\n").strip()
     self.description = line
     line = lines.readline().strip("\n").strip()
     self.name = line
     line = lines.readline().strip("\n").strip()
     self.group = line
     line = lines.readline().strip("\n").strip()
     while line != "":
         try:
             if line.startswith("Parameter"):
                 try:
                     # Initialize GPF specific parameters ...
                     param = GPFParameters.getParameterFromString(line)
                 except AttributeError:
                     # ... and generic Processing parameters
                     param = getParameterFromString(line)
                 self.addParameter(param)
             elif line.startswith("*Parameter"):
                 try:
                     param = GPFParameters.getParameterFromString(line[1:])
                 except AttributeError:
                     param = getParameterFromString(line[1:])
                 param.isAdvanced = True
                 self.addParameter(param)
             elif line.startswith("OutputRaster"):
                 self.addOutput(GPFRasterOutput.getOutputFromString(line))
             else:
                 self.addOutput(getOutputFromString(line))
             line = lines.readline().strip("\n").strip()
         except Exception, e:
             ProcessingLog.addToLog(
                 ProcessingLog.LOG_ERROR, "Could not open GPF algorithm: " +
                 self.descriptionFile + "\n" + line)
             raise e
Example #31
0
    def defineCharacteristicsFromFile(self):
        lines = open(self.descriptionFile)
        line = lines.readline().strip('\n').strip()
        self.name = line
        line = lines.readline().strip('\n').strip()
        self.cmdName = line
        line = lines.readline().strip('\n').strip()
        self.group = line

        line = lines.readline().strip('\n').strip()
        while line != '':
            try:
                line = line.strip('\n').strip()
                if line.startswith('Parameter'):
                    param = getParameterFromString(line)
                    self.addParameter(param)
                else:
                    self.addOutput(getOutputFromString(line))
                line = lines.readline().strip('\n').strip()
            except Exception, e:
                ProcessingLog.addToLog(ProcessingLog.LOG_ERROR,
                    self.tr('Could not load TauDEM algorithm: %s\n%s' % (self.descriptionFile, line)))
                raise e
Example #32
0
    def processParameterLine(self, line):
        param = None
        line = line.replace('#', '')

        if line == "nomodeler":
            self.showInModeler = False
            return
        if line == "nocrswarning":
            self.noCRSWarning = True
            return
        tokens = line.split('=', 1)
        desc = self.createDescriptiveName(tokens[0])
        if tokens[1].lower().strip() == 'group':
            self.group = self.i18n_group = tokens[0]
            return
        if tokens[1].lower().strip() == 'name':
            self.name = self.i18n_name = tokens[0]
            return

        out = getOutputFromString(line)
        if out is None:
            param = getParameterFromString(line)

        if param is not None:
            self.addParameter(param)
        elif out is not None:
            out.name = tokens[0]
            out.description = desc
            self.addOutput(out)
        else:
            raise WrongScriptException(
                self.tr(
                    'Could not load script: {0}.\n'
                    'Problem with line "{1}"',
                    'ScriptAlgorithm').format(self.descriptionFile or '',
                                              line))
Example #33
0
    def defineCharacteristicsFromFile(self):
        lines = open(self.descriptionFile)
        line = lines.readline().strip('\n').strip()
        self.grass7Name = line
        line = lines.readline().strip('\n').strip()
        self.name = line
        self.i18n_name = QCoreApplication.translate("GrassAlgorithm", line)
        if " - " not in self.name:
            self.name = self.grass7Name + " - " + self.name
            self.i18n_name = self.grass7Name + " - " + self.i18n_name
        line = lines.readline().strip('\n').strip()
        self.group = line
        self.i18n_group = QCoreApplication.translate("GrassAlgorithm", line)
        hasRasterOutput = False
        hasVectorInput = False
        vectorOutputs = 0
        line = lines.readline().strip('\n').strip()
        while line != '':
            try:
                line = line.strip('\n').strip()
                if line.startswith('Hardcoded'):
                    self.hardcodedStrings.append(line[len('Hardcoded|'):])
                elif line.startswith('Parameter'):
                    parameter = getParameterFromString(line)
                    self.addParameter(parameter)
                    if isinstance(parameter, ParameterVector):
                        hasVectorInput = True
                    if isinstance(parameter, ParameterMultipleInput) \
                       and parameter.datatype < 3:
                        hasVectorInput = True
                elif line.startswith('*Parameter'):
                    param = getParameterFromString(line[1:])
                    param.isAdvanced = True
                    self.addParameter(param)
                else:
                    output = getOutputFromString(line)
                    self.addOutput(output)
                    if isinstance(output, OutputRaster):
                        hasRasterOutput = True
                    elif isinstance(output, OutputVector):
                        vectorOutputs += 1
                    if isinstance(output, OutputHTML):
                        self.addOutput(
                            OutputFile("rawoutput",
                                       output.description + " (raw output)",
                                       "txt"))
                line = lines.readline().strip('\n').strip()
            except Exception as e:
                ProcessingLog.addToLog(
                    ProcessingLog.LOG_ERROR,
                    self.tr('Could not open GRASS GIS 7 algorithm: %s\n%s' %
                            (self.descriptionFile, line)))
                raise e
        lines.close()

        self.addParameter(
            ParameterExtent(self.GRASS_REGION_EXTENT_PARAMETER,
                            self.tr('GRASS GIS 7 region extent')))
        if hasRasterOutput:
            self.addParameter(
                ParameterNumber(
                    self.GRASS_REGION_CELLSIZE_PARAMETER,
                    self.tr(
                        'GRASS GIS 7 region cellsize (leave 0 for default)'),
                    0, None, 0.0))
        if hasVectorInput:
            param = ParameterNumber(self.GRASS_SNAP_TOLERANCE_PARAMETER,
                                    'v.in.ogr snap tolerance (-1 = no snap)',
                                    -1, None, -1.0)
            param.isAdvanced = True
            self.addParameter(param)
            param = ParameterNumber(self.GRASS_MIN_AREA_PARAMETER,
                                    'v.in.ogr min area', 0, None, 0.0001)
            param.isAdvanced = True
            self.addParameter(param)
        if vectorOutputs == 1:
            param = ParameterSelection(self.GRASS_OUTPUT_TYPE_PARAMETER,
                                       'v.out.ogr output type',
                                       self.OUTPUT_TYPES)
            param.isAdvanced = True
            self.addParameter(param)
Example #34
0
    def defineCharacteristicsFromFile(self):
        with open(self.descriptionFile) as lines:
            line = lines.readline().strip('\n').strip()
            self.grass7Name = line
            line = lines.readline().strip('\n').strip()
            self._name = line
            self._display_name = QCoreApplication.translate("GrassAlgorithm", line)
            if " - " not in self._name:
                self._name = self.grass7Name + " - " + self._name
                self._display_name = self.grass7Name + " - " + self._display_name

            self._name = self._name[:self._name.find(' ')].lower()

            line = lines.readline().strip('\n').strip()
            self._group = QCoreApplication.translate("GrassAlgorithm", line)
            hasRasterOutput = False
            hasVectorInput = False
            vectorOutputs = 0
            line = lines.readline().strip('\n').strip()
            while line != '':
                try:
                    line = line.strip('\n').strip()
                    if line.startswith('Hardcoded'):
                        self.hardcodedStrings.append(line[len('Hardcoded|'):])
                    parameter = getParameterFromString(line)
                    if parameter is not None:
                        self.addParameter(parameter)
                        if isinstance(parameter, ParameterVector):
                            hasVectorInput = True
                        if isinstance(parameter, ParameterMultipleInput) \
                           and parameter.datatype < 3:
                            hasVectorInput = True
                    else:
                        output = getOutputFromString(line)
                        self.addOutput(output)
                        if isinstance(output, OutputRaster):
                            hasRasterOutput = True
                        elif isinstance(output, OutputVector):
                            vectorOutputs += 1
                        if isinstance(output, OutputHTML):
                            self.addOutput(OutputFile("rawoutput",
                                                      self.tr("{0} (raw output)").format(output.description()),
                                                      "txt"))
                    line = lines.readline().strip('\n').strip()
                except Exception as e:
                    QgsMessageLog.logMessage(self.tr('Could not open GRASS GIS 7 algorithm: {0}\n{1}').format(self.descriptionFile, line), self.tr('Processing'), QgsMessageLog.CRITICAL)
                    raise e

        self.addParameter(ParameterExtent(
            self.GRASS_REGION_EXTENT_PARAMETER,
            self.tr('GRASS GIS 7 region extent'))
        )
        if hasRasterOutput:
            self.addParameter(ParameterNumber(
                self.GRASS_REGION_CELLSIZE_PARAMETER,
                self.tr('GRASS GIS 7 region cellsize (leave 0 for default)'),
                0, None, 0.0))
        if hasVectorInput:
            param = ParameterNumber(self.GRASS_SNAP_TOLERANCE_PARAMETER,
                                    'v.in.ogr snap tolerance (-1 = no snap)',
                                    -1, None, -1.0)
            param.setFlags(param.flags() | QgsProcessingParameterDefinition.FlagAdvanced)
            self.addParameter(param)
            param = ParameterNumber(self.GRASS_MIN_AREA_PARAMETER,
                                    'v.in.ogr min area', 0, None, 0.0001)
            param.setFlags(param.flags() | QgsProcessingParameterDefinition.FlagAdvanced)
            self.addParameter(param)
        if vectorOutputs == 1:
            param = ParameterSelection(self.GRASS_OUTPUT_TYPE_PARAMETER,
                                       'v.out.ogr output type',
                                       self.OUTPUT_TYPES)
            param.setFlags(param.flags() | QgsProcessingParameterDefinition.FlagAdvanced)
            self.addParameter(param)
Example #35
0
    def defineCharacteristicsFromFile(self):
        lines = open(self.descriptionFile)
        line = lines.readline().strip('\n').strip()
        self.grass7Name = line
        line = lines.readline().strip('\n').strip()
        self.name = line
        self.i18n_name = QCoreApplication.translate("GrassAlgorithm", line)
        if " - " not in self.name:
            self.name = self.grass7Name + " - " + self.name
            self.i18n_name = self.grass7Name + " - " + self.i18n_name
        line = lines.readline().strip('\n').strip()
        self.group = line
        self.i18n_group = QCoreApplication.translate("GrassAlgorithm", line)
        hasRasterOutput = False
        hasVectorInput = False
        vectorOutputs = 0
        line = lines.readline().strip('\n').strip()
        while line != '':
            try:
                line = line.strip('\n').strip()
                if line.startswith('Parameter'):
                    parameter = getParameterFromString(line)
                    self.addParameter(parameter)
                    if isinstance(parameter, ParameterVector):
                        hasVectorInput = True
                    if isinstance(parameter, ParameterMultipleInput) \
                       and parameter.datatype < 3:
                        hasVectorInput = True
                elif line.startswith('*Parameter'):
                    param = getParameterFromString(line[1:])
                    param.isAdvanced = True
                    self.addParameter(param)
                else:
                    output = getOutputFromString(line)
                    self.addOutput(output)
                    if isinstance(output, OutputRaster):
                        hasRasterOutput = True
                    elif isinstance(output, OutputVector):
                        vectorOutputs += 1
                line = lines.readline().strip('\n').strip()
            except Exception as e:
                ProcessingLog.addToLog(
                    ProcessingLog.LOG_ERROR,
                    self.tr('Could not open GRASS GIS 7 algorithm: %s\n%s' % (self.descriptionFile, line)))
                raise e
        lines.close()

        self.addParameter(ParameterExtent(
            self.GRASS_REGION_EXTENT_PARAMETER,
            self.tr('GRASS GIS 7 region extent'))
        )
        if hasRasterOutput:
            self.addParameter(ParameterNumber(
                self.GRASS_REGION_CELLSIZE_PARAMETER,
                self.tr('GRASS GIS 7 region cellsize (leave 0 for default)'),
                0, None, 0.0))
        if hasVectorInput:
            param = ParameterNumber(self.GRASS_SNAP_TOLERANCE_PARAMETER,
                                    'v.in.ogr snap tolerance (-1 = no snap)',
                                    -1, None, -1.0)
            param.isAdvanced = True
            self.addParameter(param)
            param = ParameterNumber(self.GRASS_MIN_AREA_PARAMETER,
                                    'v.in.ogr min area', 0, None, 0.0001)
            param.isAdvanced = True
            self.addParameter(param)
        if vectorOutputs == 1:
            param = ParameterSelection(self.GRASS_OUTPUT_TYPE_PARAMETER,
                                       'v.out.ogr output type',
                                       self.OUTPUT_TYPES)
            param.isAdvanced = True
            self.addParameter(param)
Example #36
0
class OTBAlgorithm(GeoAlgorithm):

    REGION_OF_INTEREST = "ROI"

    def __init__(self, descriptionfile):
        GeoAlgorithm.__init__(self)
        self.roiFile = None
        self.descriptionFile = descriptionfile
        self.defineCharacteristicsFromFile()
        self.numExportedLayers = 0
        self.hasROI = None

    def __str__(self):
        return ("Algo : " + self.name + " from app : " + self.cliName +
                " in : " + self.group)

    def getCopy(self):
        newone = OTBAlgorithm(self.descriptionFile)
        newone.provider = self.provider
        return newone

    def getIcon(self):
        return PyQt4.QtGui.QIcon(
            os.path.dirname(__file__) + "/../../images/otb.png")

    def help(self):
        folder = os.path.join(OTBUtils.otbDescriptionPath(), 'doc')
        helpfile = os.path.join(str(folder), self.appkey + ".html")
        if os.path.exists(helpfile):
            return False, helpfile
        else:
            raise False, None

    def adapt_list_to_string(self, c_list):
        a_list = c_list[1:]
        if a_list[0] in ["ParameterVector", "ParameterMultipleInput"]:
            if c_list[0] == "ParameterType_InputImageList":
                a_list[3] = 3
            elif c_list[0] == "ParameterType_InputFilenameList":
                a_list[3] = 4
            else:
                a_list[3] = -1

        a_list[1] = "-%s" % a_list[1]

        def mystr(par):
            if type(par) == type([]):
                return ";".join(par)
            return str(par)

        b_list = map(mystr, a_list)
        res = "|".join(b_list)
        return res

    def get_list_from_node(self, myet):
        all_params = []
        for parameter in myet.iter('parameter'):
            rebuild = []
            par_type = parameter.find('parameter_type').text
            key = parameter.find('key').text
            name = parameter.find('name').text
            source_par_type = parameter.find(
                'parameter_type').attrib['source_parameter_type']
            rebuild.append(source_par_type)
            rebuild.append(par_type)
            rebuild.append(key)
            rebuild.append(name)
            for each in parameter[4:]:
                if not each.tag in ["hidden"]:
                    if len(list(each)) == 0:
                        rebuild.append(each.text)
                    else:
                        rebuild.append(
                            [item.text for item in each.iter('choice')])
            all_params.append(rebuild)
        return all_params

    def defineCharacteristicsFromFile(self):
        content = open(self.descriptionFile).read()
        dom_model = ET.fromstring(content)

        self.appkey = dom_model.find('key').text
        self.cliName = dom_model.find('exec').text
        self.name = dom_model.find('longname').text
        self.group = dom_model.find('group').text

        #ProcessingLog.addToLog(ProcessingLog.LOG_INFO, "Reading parameters for %s" % self.appkey)

        rebu = None
        the_result = None

        try:
            rebu = self.get_list_from_node(dom_model)
            the_result = map(self.adapt_list_to_string, rebu)
        except Exception, e:
            ProcessingLog.addToLog(
                ProcessingLog.LOG_ERROR, "Could not open OTB algorithm: " +
                self.descriptionFile + "\n" + traceback.format_exc())
            raise e

        for line in the_result:
            try:
                if line.startswith("Parameter") or line.startswith(
                        "*Parameter"):
                    if line.startswith("*Parameter"):
                        param = getParameterFromString(line[1:])
                        param.isAdvanced = True
                    else:
                        param = getParameterFromString(line)
                    # Hack for initializing the elevation parameters from Processing configuration
                    if param.name == "-elev.dem.path" or param.name == "-elev.dem" or "elev.dem" in param.name:
                        param.default = OTBUtils.otbSRTMPath()
                    elif param.name == "-elev.dem.geoid" or param.name == "-elev.geoid" or "elev.geoid" in param.name:
                        param.default = OTBUtils.otbGeoidPath()
                    self.addParameter(param)
                elif line.startswith("Extent"):
                    self.addParameter(
                        ParameterExtent(self.REGION_OF_INTEREST,
                                        "Region of interest", "0,1,0,1"))
                    self.hasROI = True
                else:
                    self.addOutput(getOutputFromString(line))
            except Exception, e:
                ProcessingLog.addToLog(
                    ProcessingLog.LOG_ERROR, "Could not open OTB algorithm: " +
                    self.descriptionFile + "\n" + line)
                raise e
Example #37
0
    def defineCharacteristicsFromFile(self):
        with open(self.descriptionFile) as lines:
            line = lines.readline().strip('\n').strip()
            self.grass7Name = line
            line = lines.readline().strip('\n').strip()
            self._name = line
            self._display_name = QCoreApplication.translate(
                "GrassAlgorithm", line)
            if " - " not in self._name:
                self._name = self.grass7Name + " - " + self._name
                self._display_name = self.grass7Name + " - " + self._display_name

            self._name = self._name[:self._name.find(' ')].lower()

            line = lines.readline().strip('\n').strip()
            self._group = QCoreApplication.translate("GrassAlgorithm", line)
            hasRasterOutput = False
            hasVectorInput = False
            vectorOutputs = 0
            line = lines.readline().strip('\n').strip()
            while line != '':
                try:
                    line = line.strip('\n').strip()
                    if line.startswith('Hardcoded'):
                        self.hardcodedStrings.append(line[len('Hardcoded|'):])
                    parameter = getParameterFromString(line)
                    if parameter is not None:
                        self.addParameter(parameter)
                        if isinstance(parameter, ParameterVector):
                            hasVectorInput = True
                        if isinstance(parameter, ParameterMultipleInput) \
                           and parameter.datatype < 3:
                            hasVectorInput = True
                    else:
                        output = getOutputFromString(line)
                        self.addOutput(output)
                        if isinstance(output, OutputRaster):
                            hasRasterOutput = True
                        elif isinstance(output, OutputVector):
                            vectorOutputs += 1
                        if isinstance(output, OutputHTML):
                            self.addOutput(
                                OutputFile(
                                    "rawoutput",
                                    self.tr("{0} (raw output)").format(
                                        output.description), "txt"))
                    line = lines.readline().strip('\n').strip()
                except Exception as e:
                    QgsMessageLog.logMessage(
                        self.tr(
                            'Could not open GRASS GIS 7 algorithm: {0}\n{1}').
                        format(self.descriptionFile, line),
                        self.tr('Processing'), QgsMessageLog.CRITICAL)
                    raise e

        self.addParameter(
            ParameterExtent(self.GRASS_REGION_EXTENT_PARAMETER,
                            self.tr('GRASS GIS 7 region extent')))
        if hasRasterOutput:
            self.addParameter(
                ParameterNumber(
                    self.GRASS_REGION_CELLSIZE_PARAMETER,
                    self.tr(
                        'GRASS GIS 7 region cellsize (leave 0 for default)'),
                    0, None, 0.0))
        if hasVectorInput:
            param = ParameterNumber(self.GRASS_SNAP_TOLERANCE_PARAMETER,
                                    'v.in.ogr snap tolerance (-1 = no snap)',
                                    -1, None, -1.0)
            param.isAdvanced = True
            self.addParameter(param)
            param = ParameterNumber(self.GRASS_MIN_AREA_PARAMETER,
                                    'v.in.ogr min area', 0, None, 0.0001)
            param.isAdvanced = True
            self.addParameter(param)
        if vectorOutputs == 1:
            param = ParameterSelection(self.GRASS_OUTPUT_TYPE_PARAMETER,
                                       'v.out.ogr output type',
                                       self.OUTPUT_TYPES)
            param.isAdvanced = True
            self.addParameter(param)
Example #38
0
    def defineCharacteristicsFromFile(self):
        with open(self.descriptionFile) as lines:
            line = lines.readline().strip("\n").strip()
            self.grass7Name = line
            line = lines.readline().strip("\n").strip()
            self.name = line
            self.i18n_name = QCoreApplication.translate("GrassAlgorithm", line)
            if " - " not in self.name:
                self.name = self.grass7Name + " - " + self.name
                self.i18n_name = self.grass7Name + " - " + self.i18n_name
            line = lines.readline().strip("\n").strip()
            self.group = line
            self.i18n_group = QCoreApplication.translate("GrassAlgorithm", line)
            hasRasterOutput = False
            hasVectorInput = False
            vectorOutputs = 0
            line = lines.readline().strip("\n").strip()
            while line != "":
                try:
                    line = line.strip("\n").strip()
                    if line.startswith("Hardcoded"):
                        self.hardcodedStrings.append(line[len("Hardcoded|") :])
                    parameter = getParameterFromString(line)
                    if parameter is not None:
                        self.addParameter(parameter)
                        if isinstance(parameter, ParameterVector):
                            hasVectorInput = True
                        if isinstance(parameter, ParameterMultipleInput) and parameter.datatype < 3:
                            hasVectorInput = True
                    else:
                        output = getOutputFromString(line)
                        self.addOutput(output)
                        if isinstance(output, OutputRaster):
                            hasRasterOutput = True
                        elif isinstance(output, OutputVector):
                            vectorOutputs += 1
                        if isinstance(output, OutputHTML):
                            self.addOutput(OutputFile("rawoutput", output.description + " (raw output)", "txt"))
                    line = lines.readline().strip("\n").strip()
                except Exception as e:
                    ProcessingLog.addToLog(
                        ProcessingLog.LOG_ERROR,
                        self.tr("Could not open GRASS GIS 7 algorithm: %s\n%s" % (self.descriptionFile, line)),
                    )
                    raise e

        self.addParameter(ParameterExtent(self.GRASS_REGION_EXTENT_PARAMETER, self.tr("GRASS GIS 7 region extent")))
        if hasRasterOutput:
            self.addParameter(
                ParameterNumber(
                    self.GRASS_REGION_CELLSIZE_PARAMETER,
                    self.tr("GRASS GIS 7 region cellsize (leave 0 for default)"),
                    0,
                    None,
                    0.0,
                )
            )
        if hasVectorInput:
            param = ParameterNumber(
                self.GRASS_SNAP_TOLERANCE_PARAMETER, "v.in.ogr snap tolerance (-1 = no snap)", -1, None, -1.0
            )
            param.isAdvanced = True
            self.addParameter(param)
            param = ParameterNumber(self.GRASS_MIN_AREA_PARAMETER, "v.in.ogr min area", 0, None, 0.0001)
            param.isAdvanced = True
            self.addParameter(param)
        if vectorOutputs == 1:
            param = ParameterSelection(self.GRASS_OUTPUT_TYPE_PARAMETER, "v.out.ogr output type", self.OUTPUT_TYPES)
            param.isAdvanced = True
            self.addParameter(param)