def process_cluster(cluster):
network = get_network_from_cluster(cluster)
hard = cluster_hard(network)
subtrees = cluster_networks.potential_number_of_calls(network)
soft_too_expensive = subtrees > MAX_SUBTREES
async = not DEBUG
q = Queue(connection=Redis(), default_timeout=60*15, async=async)
def download_hard(cluster):
g = get_network_from_cluster(cluster)
hard = cluster_hard(g)
s = str(hard)
r = Response(body=s, status=200)
r.set_header('Content-Type', 'text/txt')
r.set_header('Content-Disposition', 'attachment; filename="phylonetwork_soft.txt"')
return r
def process_enewick(phrase):
try:
g = enewick.enewick_to_phylonet(phrase)
except enewick.MalformedNewickException:
redirect("/?error=enewick")
trans = {}
for node in g.nodes():
if "#" in node:
new_node = node.replace("#", "")
trans[node] = new_node
nx.relabel_nodes(g, trans, copy=False)
clusters = re.sub("\s+", "", str(cluster_hard(g)))
quoted = urllib.quote_plus(clusters)
redirect("/cluster/"+quoted)
