Python validate_sequence Examples

Example #1

File: test_migrate_db.py Project: kevinliam/VoSeq

 def test_validate_sequence_false_null(self):
     sequence = None
     validation = migrate_script.validate_sequence(sequence)
     self.assertEqual(validation.is_valid, False)
     self.assertEqual(validation.invalid_character, 'Empty sequence')

Example #2

File: test_migrate_db.py Project: kevinliam/VoSeq

 def test_validate_sequence_false_whith_space(self):
     sequence = 'ATCAGAN ?-'
     validation = migrate_script.validate_sequence(sequence)
     self.assertEqual(validation.is_valid, False)
     self.assertEqual(validation.invalid_character, 'White space')

Example #3

File: test_migrate_db.py Project: kevinliam/VoSeq

 def test_validate_sequence_false_tilde(self):
     sequence = 'ATCAGAN~?-'
     validation = migrate_script.validate_sequence(sequence)
     self.assertEqual(validation.is_valid, False)
     self.assertEqual(validation.invalid_character, '~')

Example #4

File: test_migrate_db.py Project: kevinliam/VoSeq

 def test_validate_sequence_true(self):
     sequence = 'ATCAGAN?-'
     validation = migrate_script.validate_sequence(sequence)
     self.assertEqual(validation.is_valid, True)

Example #5

File: test_migrate_db.py Project: Lakeshed/VoSeq

 def test_validate_sequence_false_null(self):
     sequence = None
     validation = migrate_script.validate_sequence(sequence)
     self.assertEqual(validation.is_valid, False)
     self.assertEqual(validation.invalid_character, 'Empty sequence')

Example #6

File: test_migrate_db.py Project: Lakeshed/VoSeq

 def test_validate_sequence_false_tilde(self):
     sequence = 'ATCAGAN~?-'
     validation = migrate_script.validate_sequence(sequence)
     self.assertEqual(validation.is_valid, False)
     self.assertEqual(validation.invalid_character, '~')

Example #7

File: test_migrate_db.py Project: Lakeshed/VoSeq

 def test_validate_sequence_false_whith_space(self):
     sequence = 'ATCAGAN ?-'
     validation = migrate_script.validate_sequence(sequence)
     self.assertEqual(validation.is_valid, False)
     self.assertEqual(validation.invalid_character, 'White space')

Example #8

File: test_migrate_db.py Project: Lakeshed/VoSeq

 def test_validate_sequence_true(self):
     sequence = 'ATCAGAN?-'
     validation = migrate_script.validate_sequence(sequence)
     self.assertEqual(validation.is_valid, True)