class BaseApiTest(unittest.TestCase):
tc = app.test_client()
def init(self):
"""
Call in the setUp function
Disables Flask removing the session between requests
"""
# Prevent Flask-SQLAlchemy from removing session after each request
def do_nothing():
pass
self.old_db_session_remove = db.session.remove
db.session.remove = do_nothing
def cleanup(self):
"""
call in the tearDown function
Rolls back and removes session at end of each test
"""
db.session.rollback()
self.old_db_session_remove()
def login(self, login=DBO_USER):
"""
Logs into the system for edit capabilities
"""
r = self.tc.post('/login', data=dict(user=login, password=''))
import test_config
import unittest
from pwi import app
tc = app.test_client()
class ExperimentDetailTestCase(unittest.TestCase):
# Test the experiment detail blueprint
def test_experiment_detail_basic_info(self):
# query for a mapping experiment
r = tc.get('/detail/experiment/MGI:39529')
# check mgiid
assert 'MGI:39529' in r.data, "check MGI ID"
# check reference
assert 'J:9342' in r.data, "check experiment reference"
# check reference note
assert 'Revised gene symbols' in r.data, "check Reference Experiment Note"
# check experiment type
assert 'TEXT-Genetic Cross' in r.data, "check experiment type"
# check chromosome
assert '1' in r.data, "check chromosome"
# check experiment note
assert 'Supporting data is reported elsewhere' in r.data, "check experiment note"
def test_experiment_detail_marker_table(self):
# query for a mapping experiment
r = tc.get('/detail/experiment/MGI:39529')
# check marker symbol