Python getAstigmaticDefocii Examples

Example #1

File: fftmaker.py Project: spartango/LeginonSpots

 def estimateAstigmation(self, params):
     if self.rpixelsize["x"] != self.rpixelsize["y"]:
         self.logger.error("Astigmatic defocus calculation not implemented for unequal x, y pixelsizes")
     z0, zast, ast_ratio, angle = fftfun.getAstigmaticDefocii(params, self.rpixelsize["x"], self.ht)
     self.logger.info(
         "z0 %.3f um, zast %.3f um (%.0f ), angle= %.1f deg"
         % (z0 * 1e6, zast * 1e6, ast_ratio * 100, angle * 180.0 / math.pi)
     )

Example #2

File: fftmaker.py Project: a01092023741/myami-3.2-freeHand

 def estimateAstigmation(self, params):
     if self.rpixelsize['x'] != self.rpixelsize['y']:
         self.logger.error(
             'Astigmatic defocus calculation not implemented for unequal x, y pixelsizes'
         )
     z0, zast, ast_ratio, angle = fftfun.getAstigmaticDefocii(
         params, self.rpixelsize['x'], self.ht, self.cs)
     self.logger.info(
         'z0 %.3f um, zast %.3f um (%.0f ), angle= %.1f deg' %
         (z0 * 1e6, zast * 1e6, ast_ratio * 100, angle * 180.0 / math.pi))

Example #3

File: manualfocuschecker.py Project: kraftp/Leginon-Feature-Detection-Modification

 def estimateAstigmation(self,params):
         z0, zast, ast_ratio, angle = fftfun.getAstigmaticDefocii(params,self.rpixelsize,self.ht)
         self.logger.info('z0 %.2f um, zast %.2f um (%.0f %%), angle= %.0f deg' % (z0*1e6,zast*1e6,ast_ratio*100, angle*180.0/math.pi))

Example #4

File: manualfocuschecker.py Project: a01092023741/myami-3.2-freeHand

	def estimateAstigmation(self,params):
		z0, zast, ast_ratio, angle = fftfun.getAstigmaticDefocii(params,self.rpixelsize,self.ht)
		self.logger.info('z0 %.2f um, zast %.2f um (%.0f %%), angle= %.0f deg' % (z0*1e6,zast*1e6,ast_ratio*100, angle*180.0/math.pi))