from pybib import JournalList, BibtexBibliography
from matplotlib import pyplot as plt
import numpy as np
bb = BibtexBibliography()
bb.read_db()
histogram_dict = {}
for entry in bb.database:
try:
abbr = entry['journal_abbreviated']
except:
pass
if abbr in histogram_dict.keys():
histogram_dict[abbr] = histogram_dict[abbr] + 1
else:
histogram_dict[abbr] = 1
labels = histogram_dict.keys()
counts = []
for label in labels:
counts.append(histogram_dict[label])
idx_vec = np.argsort(counts)[::-1]
counts = [counts[idx] for idx in idx_vec]
labels = [labels[idx] for idx in idx_vec]
fig = plt.figure(figsize=(20, 5))
ax = plt.axes()
from pybib import JournalList, BibtexBibliography
build_journal_db = False
if build_journal_db:
jlist = JournalList()
jlist.populate_from_csv(os.path.join(JOURNAL_LIST_DIR, 'isi_html.csv'))
jlist.populate_from_csv(os.path.join(JOURNAL_LIST_DIR, 'jlist.csv'))
jlist.populate_from_csv(os.path.join(JOURNAL_LIST_DIR, 'additions.csv'),
True)
jlist.write_db(False)
bb = BibtexBibliography()
rebuild = False
if rebuild:
bb.populate_from_bibtex(BIBTEX_FILENAME)
bb.remove_brackets()
bb.remove_newlines()
bb.replace_strings(TITLE_KEY_FILENAME)
bb.clean_journal_titles(debug=False)
bb.fix_tag_logic(debug=False)
bb.fix_title_case(debug=False)
bb.write_db()
bb.read_db()
print bb.to_bibtex(abbreviated=True)
from pybib import JournalList,BibtexBibliography
from matplotlib import pyplot as plt
import numpy as np
bb = BibtexBibliography()
bb.read_db()
histogram_dict = {}
for entry in bb.database:
try:
abbr = entry['journal_abbreviated']
except:
pass
if abbr in histogram_dict.keys():
histogram_dict[abbr] = histogram_dict[abbr]+1
else:
histogram_dict[abbr] = 1
labels = histogram_dict.keys()
counts = []
for label in labels:
counts.append(histogram_dict[label])
idx_vec = np.argsort(counts)[::-1]
counts = [counts[idx] for idx in idx_vec]
labels = [labels[idx] for idx in idx_vec]
from pybib import JournalList,BibtexBibliography
build_journal_db = False
if build_journal_db:
jlist = JournalList()
jlist.populate_from_csv(os.path.join(JOURNAL_LIST_DIR,'isi_html.csv'))
jlist.populate_from_csv(os.path.join(JOURNAL_LIST_DIR,'jlist.csv'))
jlist.populate_from_csv(os.path.join(JOURNAL_LIST_DIR,'additions.csv'),True)
jlist.write_db(False)
bb = BibtexBibliography()
rebuild = False
if rebuild:
bb.populate_from_bibtex(BIBTEX_FILENAME)
bb.remove_brackets()
bb.remove_newlines()
bb.replace_strings(TITLE_KEY_FILENAME)
bb.clean_journal_titles(debug=False)
bb.fix_tag_logic(debug=False)
bb.fix_title_case(debug=False)
bb.write_db()
bb.read_db()
print bb.to_bibtex(abbreviated=True)
